RNA–Protein interactions for RNA: ENST00000591764.1

DNMT1-224, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 341 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-224ENST00000591764 USP17L13C9JLJ4 530 aa10.01□□□□□ -0.81
DNMT1-224ENST00000591764 USP17L11C9JVI0 530 aa10.01□□□□□ -0.81
DNMT1-224ENST00000591764 USP17L18D6R9N7 530 aa10.01□□□□□ -0.81
DNMT1-224ENST00000591764 USP17L22D6RA61 530 aa10.01□□□□□ -0.81
DNMT1-224ENST00000591764 USP17L17D6RBQ6 530 aa10.01□□□□□ -0.81
DNMT1-224ENST00000591764 USP17L19D6RCP7 530 aa10.01□□□□□ -0.81
DNMT1-224ENST00000591764 USP17L20D6RJB6 530 aa10.01□□□□□ -0.81
DNMT1-224ENST00000591764 GDF11O95390 407 aa10.01□□□□□ -0.81
DNMT1-224ENST00000591764 COL6A1P12109 1028 aa10.01□□□□□ -0.81
DNMT1-224ENST00000591764 USP17L24Q0WX57 530 aa10.01□□□□□ -0.81
DNMT1-224ENST00000591764 TMED8Q6PL24 325 aaPredicted RBP10.01□□□□□ -0.81
DNMT1-224ENST00000591764 METTL16Q86W50 562 aaKnown RBP10.01□□□□□ -0.81
DNMT1-224ENST00000591764 UNC80Q8N2C7 3258 aa10.01□□□□□ -0.81
DNMT1-224ENST00000591764 SLC15A5A6NIM6 579 aa10□□□□□ -0.81
DNMT1-224ENST00000591764 CNGA1P29973 690 aa10□□□□□ -0.81
DNMT1-224ENST00000591764 USP5P45974 858 aa10□□□□□ -0.81
DNMT1-224ENST00000591764 ATP2B2Q01814 1243 aa10□□□□□ -0.81
DNMT1-224ENST00000591764 LRRC26Q2I0M4 334 aa10□□□□□ -0.81
DNMT1-224ENST00000591764 PHF6Q8IWS0 365 aaKnown RBP eCLIP10□□□□□ -0.81
DNMT1-224ENST00000591764 LRRN4Q8WUT4 740 aa10□□□□□ -0.81
DNMT1-224ENST00000591764 USP6NLQ92738 828 aa10□□□□□ -0.81
DNMT1-224ENST00000591764 EDC3Q96F86 508 aaKnown RBP10□□□□□ -0.81
DNMT1-224ENST00000591764 SENP6Q9GZR1 1112 aaPredicted RBP10□□□□□ -0.81
DNMT1-224ENST00000591764 CABP5Q9NP86 173 aa10□□□□□ -0.81
DNMT1-224ENST00000591764 RBPJLQ9UBG7 517 aa10□□□□□ -0.81
DNMT1-224ENST00000591764 DDX20Q9UHI6 824 aaKnown RBP10□□□□□ -0.81
DNMT1-224ENST00000591764 SERPINB13Q9UIV8 391 aa10□□□□□ -0.81
DNMT1-224ENST00000591764 PALD1Q9ULE6 856 aa10□□□□□ -0.81
DNMT1-224ENST00000591764 MAP4K5Q9Y4K4 846 aa10□□□□□ -0.81
DNMT1-224ENST00000591764 FRMPD3Q5JV73 1810 aa10□□□□□ -0.81
DNMT1-224ENST00000591764 SIPA1L1O43166 1804 aa9.99□□□□□ -0.81
DNMT1-224ENST00000591764 KBTBD13C9JR72 458 aa9.99□□□□□ -0.81
DNMT1-224ENST00000591764 DNM1LO00429 736 aa9.99□□□□□ -0.81
DNMT1-224ENST00000591764 GH2P01242 217 aa9.99□□□□□ -0.81
DNMT1-224ENST00000591764 CCND3P30281 292 aaPredicted RBP9.99□□□□□ -0.81
DNMT1-224ENST00000591764 RARSP54136 660 aaKnown RBP9.99□□□□□ -0.81
DNMT1-224ENST00000591764 RRP1BQ14684 758 aaKnown RBP9.99□□□□□ -0.81
DNMT1-224ENST00000591764 RAB3GAP1Q15042 981 aa9.99□□□□□ -0.81
DNMT1-224ENST00000591764 VASH1Q7L8A9 365 aaPredicted RBP9.99□□□□□ -0.81
DNMT1-224ENST00000591764 MEIOBQ8N635 442 aa9.99□□□□□ -0.81
DNMT1-224ENST00000591764 LPAR1Q92633 364 aa9.99□□□□□ -0.81
DNMT1-224ENST00000591764 DDRGK1Q96HY6 314 aa9.99□□□□□ -0.81
DNMT1-224ENST00000591764 C12orf42Q96LP6 360 aa9.99□□□□□ -0.81
DNMT1-224ENST00000591764 PORCNQ9H237 461 aa9.99□□□□□ -0.81
DNMT1-224ENST00000591764 DNAJC18Q9H819 358 aa9.99□□□□□ -0.81
DNMT1-224ENST00000591764 GPR108Q9NPR9 543 aa9.99□□□□□ -0.81
DNMT1-224ENST00000591764 SLC5A4Q9NY91 659 aa9.99□□□□□ -0.81
DNMT1-224ENST00000591764 SAP30BPQ9UHR5 308 aaKnown RBP9.99□□□□□ -0.81
DNMT1-224ENST00000591764 CDK5RAP2Q96SN8 1893 aa9.99□□□□□ -0.81
DNMT1-224ENST00000591764 MYH1P12882 1939 aa9.98□□□□□ -0.81
DNMT1-224ENST00000591764 ZYXQ15942 572 aaKnown RBP9.98□□□□□ -0.81
DNMT1-224ENST00000591764 CCL14Q16627 93 aa9.98□□□□□ -0.81
DNMT1-224ENST00000591764 CERKLQ49MI3 558 aaPredicted RBP9.98□□□□□ -0.81
DNMT1-224ENST00000591764 TNNI3KQ59H18 835 aa9.98□□□□□ -0.81
DNMT1-224ENST00000591764 TTC6Q86TZ1 520 aa9.98□□□□□ -0.81
DNMT1-224ENST00000591764 TRMT2AQ8IZ69 625 aaKnown RBP9.98□□□□□ -0.81
DNMT1-224ENST00000591764 ARRDC4Q8NCT1 418 aa9.98□□□□□ -0.81
DNMT1-224ENST00000591764 ZNF512BQ96KM6 892 aaPredicted RBP9.98□□□□□ -0.81
DNMT1-224ENST00000591764 KIAA1683Q9H0B3 1180 aa9.98□□□□□ -0.81
DNMT1-224ENST00000591764 EHD4Q9H223 541 aa9.98□□□□□ -0.81
DNMT1-224ENST00000591764 SNRKQ9NRH2 765 aa9.98□□□□□ -0.81
DNMT1-224ENST00000591764 FPGT-TNNI3KV9GXZ4 949 aa9.98□□□□□ -0.81
DNMT1-224ENST00000591764 STRNO43815 780 aa9.97□□□□□ -0.81
DNMT1-224ENST00000591764 IDH1O75874 414 aaKnown RBP9.97□□□□□ -0.81
DNMT1-224ENST00000591764 HOXC6P09630 235 aa9.97□□□□□ -0.81
DNMT1-224ENST00000591764 VCAM1P19320 739 aa9.97□□□□□ -0.81
DNMT1-224ENST00000591764 CYP7A1P22680 504 aa9.97□□□□□ -0.81
DNMT1-224ENST00000591764 MAP3K12Q12852 859 aa9.97□□□□□ -0.81
DNMT1-224ENST00000591764 GRB14Q14449 540 aa9.97□□□□□ -0.81
DNMT1-224ENST00000591764 ABCB5Q2M3G0 1257 aa9.97□□□□□ -0.81
DNMT1-224ENST00000591764 LBX2Q6XYB7 198 aa9.97□□□□□ -0.81
DNMT1-224ENST00000591764 DPP9Q86TI2 863 aa9.97□□□□□ -0.81
DNMT1-224ENST00000591764 LINC00528Q8N1L1 170 aa9.97□□□□□ -0.81
DNMT1-224ENST00000591764 PNMA6EA0A0J9YXQ4 647 aa9.96□□□□□ -0.82
DNMT1-224ENST00000591764 CYP2E1P05181 493 aaPredicted RBP9.96□□□□□ -0.82
DNMT1-224ENST00000591764 BMP2P12643 396 aa9.96□□□□□ -0.82
DNMT1-224ENST00000591764 TRIM27P14373 513 aa9.96□□□□□ -0.82
DNMT1-224ENST00000591764 RTP1P59025 263 aa9.96□□□□□ -0.82
DNMT1-224ENST00000591764 SKIV2LQ15477 1246 aaKnown RBP9.96□□□□□ -0.82
DNMT1-224ENST00000591764 TATDN1Q6P1N9 297 aa9.96□□□□□ -0.82
DNMT1-224ENST00000591764 CATSPERGQ6ZRH7 1159 aa9.96□□□□□ -0.82
DNMT1-224ENST00000591764 MB21D1Q8N884 522 aa9.96□□□□□ -0.82
DNMT1-224ENST00000591764 FRAT1Q92837 279 aaPredicted RBP9.96□□□□□ -0.82
DNMT1-224ENST00000591764 DBNDD2Q9BQY9 259 aa9.96□□□□□ -0.82
DNMT1-224ENST00000591764 RPAP3Q9H6T3 665 aaPredicted RBP9.96□□□□□ -0.82
DNMT1-224ENST00000591764 HOXC10Q9NYD6 342 aa9.96□□□□□ -0.82
DNMT1-224ENST00000591764 ATP11BQ9Y2G3 1177 aa9.96□□□□□ -0.82
DNMT1-224ENST00000591764 DNAH12Q6ZR08 3092 aa9.96□□□□□ -0.82
DNMT1-224ENST00000591764 LAMA2P24043 3122 aaKnown RBP9.96□□□□□ -0.82
DNMT1-224ENST00000591764 MAN1A2O60476 641 aa9.95□□□□□ -0.82
DNMT1-224ENST00000591764 PEX10O60683 326 aa9.95□□□□□ -0.82
DNMT1-224ENST00000591764 SURF6O75683 361 aaKnown RBP9.95□□□□□ -0.82
DNMT1-224ENST00000591764 POLR3DP05423 398 aaPredicted RBP9.95□□□□□ -0.82
DNMT1-224ENST00000591764 ZAP70P43403 619 aa9.95□□□□□ -0.82
DNMT1-224ENST00000591764 NR6A1Q15406 480 aa9.95□□□□□ -0.82
DNMT1-224ENST00000591764 OLFML2BQ68BL8 750 aa9.95□□□□□ -0.82
DNMT1-224ENST00000591764 ADGRA1Q86SQ6 560 aa9.95□□□□□ -0.82
DNMT1-224ENST00000591764 GPKOWQ92917 476 aaPredicted RBP eCLIP9.95□□□□□ -0.821e-7■□□□□ 8.3
DNMT1-224ENST00000591764 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.95□□□□□ -0.82
DNMT1-224ENST00000591764 COL25A1Q9BXS0 654 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms