RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 NBPF26B4DH59 902 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 VIMP08670 466 aaKnown RBP11.68□□□□□ -0.54
USB1-212ENST00000566082 RASGRF1Q13972 1273 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 NONOQ15233 471 aaKnown RBP eCLIP11.68□□□□□ -0.54
USB1-212ENST00000566082 RPS6KA1Q15418 735 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 NBPF10Q6P3W6 841 aaKnown RBP11.68□□□□□ -0.54
USB1-212ENST00000566082 NBPF15Q8N660 670 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 MB21D1Q8N884 522 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 ZNF579Q8NAF0 562 aaKnown RBP11.68□□□□□ -0.54
USB1-212ENST00000566082 TTLL11Q8NHH1 800 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 SNX29Q8TEQ0 813 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 TMEM110-MUSTN1A8MSY1 372 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 KCNK3O14649 394 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 MUM1L1Q5H9M0 696 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 LRRC45Q96CN5 670 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 KRT12Q99456 494 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.68□□□□□ -0.54
USB1-212ENST00000566082 ADD3Q9UEY8 706 aaKnown RBP11.68□□□□□ -0.54
USB1-212ENST00000566082 ASAP1Q9ULH1 1129 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 TFR2Q9UP52 801 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.68□□□□□ -0.54
USB1-212ENST00000566082 UTYO14607 1347 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 HEXIM1O94992 359 aaKnown RBP11.67□□□□□ -0.54
USB1-212ENST00000566082 GOLGA8HP0CJ92 632 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 CTNNA1P35221 906 aaKnown RBP11.67□□□□□ -0.54
USB1-212ENST00000566082 LONP1P36776 959 aaKnown RBP11.67□□□□□ -0.54
USB1-212ENST00000566082 PRCPP42785 496 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 USP14P54578 494 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 DYNLL1P63167 89 aaKnown RBP11.67□□□□□ -0.54
USB1-212ENST00000566082 SFMBT2Q5VUG0 894 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 MMS19Q96T76 1030 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 ERVV-2B6SEH9 535 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 LDHCP07864 332 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 EPHB4P54760 987 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 PTPAQ15257 358 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 CCDC93Q567U6 631 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 BEND6Q5SZJ8 279 aaPredicted RBP11.67□□□□□ -0.54
USB1-212ENST00000566082 RUFY4Q6ZNE9 571 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 FOXP4Q8IVH2 680 aaPredicted RBP11.67□□□□□ -0.54
USB1-212ENST00000566082 HEG1Q9ULI3 1381 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 ZRANB2O95218 330 aaKnown RBP eCLIP11.67□□□□□ -0.54
USB1-212ENST00000566082 ZBED6P86452 979 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 NNTQ13423 1086 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 ASIC2Q16515 512 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 HERC4Q5GLZ8 1057 aaPredicted RBP11.67□□□□□ -0.54
USB1-212ENST00000566082 GIGYF2Q6Y7W6 1299 aaKnown RBP11.67□□□□□ -0.54
USB1-212ENST00000566082 COG1Q8WTW3 980 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 LMBR1Q8WVP7 490 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 SEC31BQ9NQW1 1179 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 BAIAP2L1Q9UHR4 511 aa11.67□□□□□ -0.54
USB1-212ENST00000566082 SEMA3EO15041 775 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 TBCAO75347 108 aaKnown RBP11.66□□□□□ -0.54
USB1-212ENST00000566082 GYPCP04921 128 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 EIF4A3P38919 411 aaKnown RBP11.66□□□□□ -0.54
USB1-212ENST00000566082 RBM5P52756 815 aaKnown RBP eCLIP11.66□□□□□ -0.54
USB1-212ENST00000566082 RASGRP2Q7LDG7 609 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 PNMA1Q8ND90 353 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 PAIP2Q9BPZ3 127 aaKnown RBP11.66□□□□□ -0.54
USB1-212ENST00000566082 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.66□□□□□ -0.54
USB1-212ENST00000566082 NCAPD2Q15021 1401 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 TSPOAP1O95153 1857 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 ZNF185O15231 689 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 UBE4AQ14139 1066 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 DAAM2Q86T65 1068 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 CCDC26Q8TAB7 109 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 P2RX5Q93086 422 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 JPH2Q9BR39 696 aaPredicted RBP11.66□□□□□ -0.54
USB1-212ENST00000566082 SAMD15Q9P1V8 674 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 HPSEQ9Y251 543 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 STK36Q9NRP7 1315 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 KIF4AO95239 1232 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 FTCDO95954 541 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 EIF6P56537 245 aaKnown RBP11.66□□□□□ -0.54
USB1-212ENST00000566082 MMS22LQ6ZRQ5 1243 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 SGMS1Q86VZ5 419 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 CCDC24Q8N4L8 307 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 IGDCC4Q8TDY8 1250 aa11.66□□□□□ -0.54
USB1-212ENST00000566082 WDR19Q8NEZ3 1342 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 POLR2FP61218 127 aaKnown RBP11.65□□□□□ -0.54
USB1-212ENST00000566082 KRT26Q7Z3Y9 468 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 LSM14BQ9BX40 385 aaKnown RBP11.65□□□□□ -0.54
USB1-212ENST00000566082 TSKSQ9UJT2 592 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 NFU1Q9UMS0 254 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 AGLP35573 1532 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 CPDO75976 1380 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 MAP3K15Q6ZN16 1313 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 ESYT3A0FGR9 886 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 ANKRD62A6NC57 917 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 CLNS1AP54105 237 aaKnown RBP11.65□□□□□ -0.54
USB1-212ENST00000566082 PICALMQ13492 652 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 NLRP10Q86W26 655 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 NBPF5PQ86XG9 351 aaPredicted RBP11.65□□□□□ -0.54
USB1-212ENST00000566082 SMCR8Q8TEV9 937 aaPredicted RBP11.65□□□□□ -0.54
USB1-212ENST00000566082 NLRP3Q96P20 1036 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 DPH5Q9H2P9 285 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 BIN2Q9UBW5 565 aaPredicted RBP11.65□□□□□ -0.54
USB1-212ENST00000566082 CTDP1Q9Y5B0 961 aaPredicted RBP11.65□□□□□ -0.54
USB1-212ENST00000566082 PTPRUQ92729 1446 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 SMCO2A6NFE2 343 aa11.65□□□□□ -0.54
USB1-212ENST00000566082 LGALS16A8MUM7 142 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 246.9 ms