RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 SYMPKQ92797 1274 aaKnown RBP22.25■■□□□ 1.15
SNHG6-204ENST00000521127 MKL1Q969V6 931 aa22.25■■□□□ 1.15
SNHG6-204ENST00000521127 VTI1AQ96AJ9 217 aa22.25■■□□□ 1.15
SNHG6-204ENST00000521127 LRRCC1Q9C099 1032 aa22.25■■□□□ 1.15
SNHG6-204ENST00000521127 KATNBL1Q9H079 304 aa22.25■■□□□ 1.15
SNHG6-204ENST00000521127 CHD9Q3L8U1 2897 aa22.25■■□□□ 1.15
SNHG6-204ENST00000521127 PRDM1O75626 825 aa22.24■■□□□ 1.15
SNHG6-204ENST00000521127 GNASQ5JWF2 1037 aa22.24■■□□□ 1.15
SNHG6-204ENST00000521127 CEP95Q96GE4 821 aa22.24■■□□□ 1.15
SNHG6-204ENST00000521127 PBX4Q9BYU1 374 aa22.24■■□□□ 1.15
SNHG6-204ENST00000521127 FEM1BQ9UK73 627 aa22.24■■□□□ 1.15
SNHG6-204ENST00000521127 CTDP1Q9Y5B0 961 aaPredicted RBP22.24■■□□□ 1.15
SNHG6-204ENST00000521127 MROH7Q68CQ1 1323 aa22.24■■□□□ 1.15
SNHG6-204ENST00000521127 NCOR1O75376 2440 aa22.23■■□□□ 1.15
SNHG6-204ENST00000521127 A0A0U1RQG5 324 aaPredicted RBP22.23■■□□□ 1.15
SNHG6-204ENST00000521127 ACRP10323 421 aa22.23■■□□□ 1.15
SNHG6-204ENST00000521127 CNTN2Q02246 1040 aa22.23■■□□□ 1.15
SNHG6-204ENST00000521127 ZNF365Q70YC5 407 aa22.23■■□□□ 1.15
SNHG6-204ENST00000521127 FAM126BQ8IXS8 530 aa22.23■■□□□ 1.15
SNHG6-204ENST00000521127 CCDC144CPQ8IYA2 1237 aa22.23■■□□□ 1.15
SNHG6-204ENST00000521127 LRRC47Q8N1G4 583 aaKnown RBP22.23■■□□□ 1.15
SNHG6-204ENST00000521127 KBTBD3Q8NAB2 608 aa22.23■■□□□ 1.15
SNHG6-204ENST00000521127 CHST13Q8NET6 341 aa22.23■■□□□ 1.15
SNHG6-204ENST00000521127 PPP1R12CQ9BZL4 782 aa22.23■■□□□ 1.15
SNHG6-204ENST00000521127 SPC25Q9HBM1 224 aa22.23■■□□□ 1.15
SNHG6-204ENST00000521127 ECHDC1Q9NTX5 307 aa22.23■■□□□ 1.15
SNHG6-204ENST00000521127 MTMR4Q9NYA4 1195 aa22.23■■□□□ 1.15
SNHG6-204ENST00000521127 FBXO40Q9UH90 709 aa22.23■■□□□ 1.15
SNHG6-204ENST00000521127 NKX3-2P78367 333 aa22.22■■□□□ 1.15
SNHG6-204ENST00000521127 TJAP1Q5JTD0 557 aa22.22■■□□□ 1.15
SNHG6-204ENST00000521127 APPBP2Q92624 585 aa22.22■■□□□ 1.15
SNHG6-204ENST00000521127 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.21■■□□□ 1.15
SNHG6-204ENST00000521127 RNF113AO15541 343 aaKnown RBP22.21■■□□□ 1.15
SNHG6-204ENST00000521127 GPAA1O43292 621 aa22.21■■□□□ 1.15
SNHG6-204ENST00000521127 OAZ1P54368 228 aa22.21■■□□□ 1.15
SNHG6-204ENST00000521127 BEX3Q00994 111 aa22.21■■□□□ 1.15
SNHG6-204ENST00000521127 CCDC129Q6ZRS4 1044 aa22.21■■□□□ 1.15
SNHG6-204ENST00000521127 ZNF444Q8N0Y2 327 aaPredicted RBP22.21■■□□□ 1.15
SNHG6-204ENST00000521127 TMEM199Q8N511 208 aa22.21■■□□□ 1.15
SNHG6-204ENST00000521127 HOMER2Q9NSB8 354 aa22.21■■□□□ 1.15
SNHG6-204ENST00000521127 ASTN1O14525 1302 aa22.21■■□□□ 1.15
SNHG6-204ENST00000521127 M0R2C6 588 aa22.2■■□□□ 1.14
SNHG6-204ENST00000521127 CD4P01730 458 aa22.2■■□□□ 1.14
SNHG6-204ENST00000521127 CYP2C18P33260 490 aa22.2■■□□□ 1.14
SNHG6-204ENST00000521127 TSHZ3Q63HK5 1081 aa22.2■■□□□ 1.14
SNHG6-204ENST00000521127 SLFN13Q68D06 897 aa22.2■■□□□ 1.14
SNHG6-204ENST00000521127 FAM133AQ8N9E0 248 aa22.2■■□□□ 1.14
SNHG6-204ENST00000521127 GMCL1P1Q8NEA9 526 aa22.2■■□□□ 1.14
SNHG6-204ENST00000521127 PRDM12Q9H4Q4 367 aa22.2■■□□□ 1.14
SNHG6-204ENST00000521127 SYNPO2Q9UMS6 1093 aa22.2■■□□□ 1.14
SNHG6-204ENST00000521127 SOWAHBA6NEL2 793 aa22.19■■□□□ 1.14
SNHG6-204ENST00000521127 TTLL1O95922 423 aa22.19■■□□□ 1.14
SNHG6-204ENST00000521127 BMP3P12645 472 aa22.19■■□□□ 1.14
SNHG6-204ENST00000521127 TDO2P48775 406 aa22.19■■□□□ 1.14
SNHG6-204ENST00000521127 CCDC174Q6PII3 467 aa22.19■■□□□ 1.14
SNHG6-204ENST00000521127 SLC43A3Q8NBI5 491 aa22.19■■□□□ 1.14
SNHG6-204ENST00000521127 PPM1EQ8WY54 764 aa22.19■■□□□ 1.14
SNHG6-204ENST00000521127 CHMP4BQ9H444 224 aaKnown RBP22.19■■□□□ 1.14
SNHG6-204ENST00000521127 ZNF536O15090 1300 aa22.18■■□□□ 1.14
SNHG6-204ENST00000521127 TLR3O15455 904 aaKnown RBP22.18■■□□□ 1.14
SNHG6-204ENST00000521127 PTGS1P23219 599 aa22.18■■□□□ 1.14
SNHG6-204ENST00000521127 TNFAIP2Q03169 654 aa22.18■■□□□ 1.14
SNHG6-204ENST00000521127 ADGRE1Q14246 886 aa22.18■■□□□ 1.14
SNHG6-204ENST00000521127 C20orf194Q5TEA3 1177 aa22.18■■□□□ 1.14
SNHG6-204ENST00000521127 PSRC1Q6PGN9 363 aaPredicted RBP22.18■■□□□ 1.14
SNHG6-204ENST00000521127 CXCL17Q6UXB2 119 aa22.18■■□□□ 1.14
SNHG6-204ENST00000521127 NEDD1Q8NHV4 660 aa22.18■■□□□ 1.14
SNHG6-204ENST00000521127 AGBL1Q96MI9 1066 aa22.18■■□□□ 1.14
SNHG6-204ENST00000521127 GAS2L1Q99501 681 aaPredicted RBP22.18■■□□□ 1.14
SNHG6-204ENST00000521127 IL23AQ9NPF7 189 aa22.18■■□□□ 1.14
SNHG6-204ENST00000521127 A1CFQ9NQ94 594 aaKnown RBP22.18■■□□□ 1.14
SNHG6-204ENST00000521127 CXXC1Q9P0U4 656 aaPredicted RBP22.18■■□□□ 1.14
SNHG6-204ENST00000521127 DDX49Q9Y6V7 483 aaKnown RBP22.18■■□□□ 1.14
SNHG6-204ENST00000521127 GRIN2DO15399 1336 aa22.17■■□□□ 1.14
SNHG6-204ENST00000521127 UMODL1Q5DID0 1318 aa22.17■■□□□ 1.14
SNHG6-204ENST00000521127 TMEM232C9JQI7 657 aa22.17■■□□□ 1.14
SNHG6-204ENST00000521127 APPP05067 770 aa22.17■■□□□ 1.14
SNHG6-204ENST00000521127 IFNL3Q8IZI9 196 aa22.17■■□□□ 1.14
SNHG6-204ENST00000521127 HERVK_113Q902F9 699 aa22.17■■□□□ 1.14
SNHG6-204ENST00000521127 ACAD9Q9H845 621 aa22.17■■□□□ 1.14
SNHG6-204ENST00000521127 ZNF287Q9HBT7 754 aa22.17■■□□□ 1.14
SNHG6-204ENST00000521127 GNEQ9Y223 722 aaKnown RBP22.17■■□□□ 1.14
SNHG6-204ENST00000521127 PLIN4Q96Q06 1357 aa22.16■■□□□ 1.14
SNHG6-204ENST00000521127 PATL2C9JE40 543 aaKnown RBP22.16■■□□□ 1.14
SNHG6-204ENST00000521127 FDX1P10109 184 aa22.16■■□□□ 1.14
SNHG6-204ENST00000521127 GNAT2P19087 354 aa22.16■■□□□ 1.14
SNHG6-204ENST00000521127 AKNAD1Q5T1N1 836 aa22.16■■□□□ 1.14
SNHG6-204ENST00000521127 NOL8Q76FK4 1167 aaKnown RBP22.16■■□□□ 1.14
SNHG6-204ENST00000521127 CHMP4CQ96CF2 233 aa22.16■■□□□ 1.14
SNHG6-204ENST00000521127 RNF146Q9NTX7 359 aa22.16■■□□□ 1.14
SNHG6-204ENST00000521127 TNFRSF10AO00220 468 aa22.15■■□□□ 1.14
SNHG6-204ENST00000521127 ZFYP08048 801 aaPredicted RBP22.15■■□□□ 1.14
SNHG6-204ENST00000521127 SEC62Q99442 399 aaKnown RBP22.15■■□□□ 1.14
SNHG6-204ENST00000521127 MUC3AQ02505 3323 aa22.15■■□□□ 1.14
SNHG6-204ENST00000521127 CHD7Q9P2D1 2997 aa22.15■■□□□ 1.14
SNHG6-204ENST00000521127 BDP1A6H8Y1 2624 aa22.14■■□□□ 1.14
SNHG6-204ENST00000521127 GBF1Q92538 1859 aa22.14■■□□□ 1.13
SNHG6-204ENST00000521127 FGBP02675 491 aa22.14■■□□□ 1.13
SNHG6-204ENST00000521127 TSPY3P0CV98 308 aa22.14■■□□□ 1.13
SNHG6-204ENST00000521127 TSPY8P0CW00 308 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms