RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 IVLP07476 585 aa22.15■■□□□ 1.14
NKX2-1-202ENST00000498187 ARHGAP25P42331 645 aa22.15■■□□□ 1.14
NKX2-1-202ENST00000498187 VSNL1P62760 191 aa22.15■■□□□ 1.14
NKX2-1-202ENST00000498187 TYW1BQ6NUM6 668 aa22.15■■□□□ 1.14
NKX2-1-202ENST00000498187 DGKHQ86XP1 1220 aa22.15■■□□□ 1.14
NKX2-1-202ENST00000498187 NYXQ9GZU5 481 aa22.15■■□□□ 1.14
NKX2-1-202ENST00000498187 MYO6Q9UM54 1294 aa22.15■■□□□ 1.14
NKX2-1-202ENST00000498187 CASP8Q14790 479 aa22.14■■□□□ 1.14
NKX2-1-202ENST00000498187 WWC2Q6AWC2 1192 aa22.14■■□□□ 1.14
NKX2-1-202ENST00000498187 DYNLL2Q96FJ2 89 aa22.14■■□□□ 1.14
NKX2-1-202ENST00000498187 CCDC194A0A1B0GVG4 234 aa22.14■■□□□ 1.13
NKX2-1-202ENST00000498187 C12orf60Q5U649 245 aa22.14■■□□□ 1.13
NKX2-1-202ENST00000498187 NBPF5PQ86XG9 351 aaPredicted RBP22.14■■□□□ 1.13
NKX2-1-202ENST00000498187 C8orf37Q96NL8 207 aa22.14■■□□□ 1.13
NKX2-1-202ENST00000498187 TRIM49BA6NDI0 452 aa22.13■■□□□ 1.13
NKX2-1-202ENST00000498187 ABL1P00519 1130 aa22.13■■□□□ 1.13
NKX2-1-202ENST00000498187 GRM4Q14833 912 aa22.13■■□□□ 1.13
NKX2-1-202ENST00000498187 DTHD1Q6ZMT9 781 aa22.13■■□□□ 1.13
NKX2-1-202ENST00000498187 RASSF8Q8NHQ8 419 aa22.13■■□□□ 1.13
NKX2-1-202ENST00000498187 FAM71BQ8TC56 605 aa22.13■■□□□ 1.13
NKX2-1-202ENST00000498187 SETDB2Q96T68 719 aa22.13■■□□□ 1.13
NKX2-1-202ENST00000498187 SRP68Q9UHB9 627 aaKnown RBP22.13■■□□□ 1.13
NKX2-1-202ENST00000498187 PP2D1A8MPX8 630 aa22.13■■□□□ 1.13
NKX2-1-202ENST00000498187 M0R2N6 131 aa22.13■■□□□ 1.13
NKX2-1-202ENST00000498187 KRT9P35527 623 aa22.13■■□□□ 1.13
NKX2-1-202ENST00000498187 UBXN1Q04323 297 aa22.13■■□□□ 1.13
NKX2-1-202ENST00000498187 NAALADL2Q58DX5 795 aa22.13■■□□□ 1.13
NKX2-1-202ENST00000498187 WDR93Q6P2C0 686 aa22.13■■□□□ 1.13
NKX2-1-202ENST00000498187 TMEM60Q9H2L4 133 aa22.13■■□□□ 1.13
NKX2-1-202ENST00000498187 MAD2L2Q9UI95 211 aa22.13■■□□□ 1.13
NKX2-1-202ENST00000498187 H7C1D1 291 aa22.12■■□□□ 1.13
NKX2-1-202ENST00000498187 AMPD2Q01433 879 aa22.12■■□□□ 1.13
NKX2-1-202ENST00000498187 SPTY2D1Q68D10 685 aaPredicted RBP22.12■■□□□ 1.13
NKX2-1-202ENST00000498187 ADSSL1Q8N142 457 aa22.12■■□□□ 1.13
NKX2-1-202ENST00000498187 SLF1Q9BQI6 1058 aa22.12■■□□□ 1.13
NKX2-1-202ENST00000498187 SUGCTQ9HAC7 445 aa22.12■■□□□ 1.13
NKX2-1-202ENST00000498187 MKRN1Q9UHC7 482 aaKnown RBP22.12■■□□□ 1.13
NKX2-1-202ENST00000498187 PCDHA6Q9UN73 950 aa22.12■■□□□ 1.13
NKX2-1-202ENST00000498187 PCDHA8Q9Y5H6 950 aa22.12■■□□□ 1.13
NKX2-1-202ENST00000498187 CNTNAP4Q9C0A0 1308 aa22.12■■□□□ 1.13
NKX2-1-202ENST00000498187 PARP1P09874 1014 aaKnown RBP22.12■■□□□ 1.13
NKX2-1-202ENST00000498187 TMED8Q6PL24 325 aaPredicted RBP22.12■■□□□ 1.13
NKX2-1-202ENST00000498187 IRF2BP1Q8IU81 584 aa22.12■■□□□ 1.13
NKX2-1-202ENST00000498187 CCDC148Q8NFR7 591 aa22.12■■□□□ 1.13
NKX2-1-202ENST00000498187 MED4Q9NPJ6 270 aa22.12■■□□□ 1.13
NKX2-1-202ENST00000498187 FAN1Q9Y2M0 1017 aa22.12■■□□□ 1.13
NKX2-1-202ENST00000498187 USP17L3A6NCW0 530 aa22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 USP17L4A6NCW7 530 aa22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 INF2Q27J81 1249 aa22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 SLC35G1Q2M3R5 365 aa22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 USP17L1Q7RTZ2 530 aa22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 ANKS1AQ92625 1134 aa22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 CCDC102AQ96A19 550 aa22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 RASSF4Q9H2L5 321 aa22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 MKNK2Q9HBH9 465 aa22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 MTMR7Q9Y216 660 aa22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 EPN1Q9Y6I3 576 aaPredicted RBP22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 MYO1CO00159 1063 aa22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 N4BP1O75113 896 aaKnown RBP22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 RPS6KA5O75582 802 aa22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 GNAQP50148 359 aa22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 PMS1P54277 932 aaKnown RBP22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 HEATR3Q7Z4Q2 680 aa22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 SH3RF3Q8TEJ3 882 aaPredicted RBP22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 NARFQ9UHQ1 456 aa22.11■■□□□ 1.13
NKX2-1-202ENST00000498187 MCM3P25205 808 aa22.1■■□□□ 1.13
NKX2-1-202ENST00000498187 PLIN2Q99541 437 aa22.1■■□□□ 1.13
NKX2-1-202ENST00000498187 HAUS4Q9H6D7 363 aa22.1■■□□□ 1.13
NKX2-1-202ENST00000498187 IRS2Q9Y4H2 1338 aa22.1■■□□□ 1.13
NKX2-1-202ENST00000498187 COL24A1Q17RW2 1714 aa22.1■■□□□ 1.13
NKX2-1-202ENST00000498187 CYTH3O43739 400 aa22.09■■□□□ 1.13
NKX2-1-202ENST00000498187 NDUFA10O95299 355 aa22.09■■□□□ 1.13
NKX2-1-202ENST00000498187 TFRCP02786 760 aaKnown RBP22.09■■□□□ 1.13
NKX2-1-202ENST00000498187 UBA7P41226 1012 aa22.09■■□□□ 1.13
NKX2-1-202ENST00000498187 NOA1Q8NC60 698 aaKnown RBP22.09■■□□□ 1.13
NKX2-1-202ENST00000498187 DAGLBQ8NCG7 672 aa22.09■■□□□ 1.13
NKX2-1-202ENST00000498187 NGLY1Q96IV0 654 aa22.09■■□□□ 1.13
NKX2-1-202ENST00000498187 CHP1Q99653 195 aa22.09■■□□□ 1.13
NKX2-1-202ENST00000498187 KLRC4O43908 158 aa22.09■■□□□ 1.13
NKX2-1-202ENST00000498187 LDHBP07195 334 aaKnown RBP22.09■■□□□ 1.13
NKX2-1-202ENST00000498187 TSPY3P0CV98 308 aa22.09■■□□□ 1.13
NKX2-1-202ENST00000498187 TSPY8P0CW00 308 aa22.09■■□□□ 1.13
NKX2-1-202ENST00000498187 KCNB1Q14721 858 aa22.09■■□□□ 1.13
NKX2-1-202ENST00000498187 SRLQ86TD4 932 aa22.09■■□□□ 1.13
NKX2-1-202ENST00000498187 VIPAS39Q9H9C1 493 aa22.09■■□□□ 1.13
NKX2-1-202ENST00000498187 ROBO3Q96MS0 1386 aa22.08■■□□□ 1.13
NKX2-1-202ENST00000498187 STXBP3O00186 592 aa22.08■■□□□ 1.13
NKX2-1-202ENST00000498187 PSMD14O00487 310 aa22.08■■□□□ 1.13
NKX2-1-202ENST00000498187 VPS72Q15906 364 aa22.08■■□□□ 1.13
NKX2-1-202ENST00000498187 MB21D1Q8N884 522 aa22.08■■□□□ 1.13
NKX2-1-202ENST00000498187 OR8K1Q8NGG5 319 aa22.08■■□□□ 1.13
NKX2-1-202ENST00000498187 GUCA1BQ9UMX6 200 aa22.08■■□□□ 1.13
NKX2-1-202ENST00000498187 TTC26A0AVF1 554 aa22.08■■□□□ 1.12
NKX2-1-202ENST00000498187 LGALS16A8MUM7 142 aa22.08■■□□□ 1.12
NKX2-1-202ENST00000498187 TSR1Q2NL82 804 aaKnown RBP22.08■■□□□ 1.12
NKX2-1-202ENST00000498187 NCAPH2Q6IBW4 605 aa22.08■■□□□ 1.12
NKX2-1-202ENST00000498187 TPTE2Q6XPS3 522 aa22.08■■□□□ 1.12
NKX2-1-202ENST00000498187 TRAPPC11Q7Z392 1133 aa22.08■■□□□ 1.12
NKX2-1-202ENST00000498187 SLC44A5Q8NCS7 719 aa22.08■■□□□ 1.12
NKX2-1-202ENST00000498187 CCSER1Q9C0I3 900 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms