RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 DISC1Q9NRI5 854 aa8.38□□□□□ -1.07
HERPUD1-208ENST00000563911 REV1Q9UBZ9 1251 aa8.38□□□□□ -1.07
HERPUD1-208ENST00000563911 ANKRD30BQ9BXX2 1392 aa8.37□□□□□ -1.07
HERPUD1-208ENST00000563911 C9orf172C9J069 976 aa8.37□□□□□ -1.07
HERPUD1-208ENST00000563911 FANCGO15287 622 aa8.37□□□□□ -1.07
HERPUD1-208ENST00000563911 COL8A1P27658 744 aa8.37□□□□□ -1.07
HERPUD1-208ENST00000563911 GIPRP48546 466 aa8.37□□□□□ -1.07
HERPUD1-208ENST00000563911 RING1Q06587 406 aa8.37□□□□□ -1.07
HERPUD1-208ENST00000563911 WNT10AQ9GZT5 417 aa8.37□□□□□ -1.07
HERPUD1-208ENST00000563911 PRDM11Q9NQV5 511 aa8.37□□□□□ -1.07
HERPUD1-208ENST00000563911 R3HCC1Q9Y3T6 440 aaKnown RBP8.37□□□□□ -1.07
HERPUD1-208ENST00000563911 SART1O43290 800 aaKnown RBP8.36□□□□□ -1.07
HERPUD1-208ENST00000563911 RNGTTO60942 597 aaKnown RBP8.36□□□□□ -1.07
HERPUD1-208ENST00000563911 GLB1P16278 677 aa8.36□□□□□ -1.07
HERPUD1-208ENST00000563911 ASPAP45381 313 aa8.36□□□□□ -1.07
HERPUD1-208ENST00000563911 NRG1Q02297 640 aaPredicted RBP8.36□□□□□ -1.07
HERPUD1-208ENST00000563911 LRRFIP1Q32MZ4 808 aaKnown RBP8.36□□□□□ -1.07
HERPUD1-208ENST00000563911 ZBTB37Q5TC79 503 aa8.36□□□□□ -1.07
HERPUD1-208ENST00000563911 ANKS3Q6ZW76 656 aa8.36□□□□□ -1.07
HERPUD1-208ENST00000563911 DPH6Q7L8W6 267 aa8.36□□□□□ -1.07
HERPUD1-208ENST00000563911 RNF214Q8ND24 703 aa8.36□□□□□ -1.07
HERPUD1-208ENST00000563911 ANTXR1Q9H6X2 564 aa8.36□□□□□ -1.07
HERPUD1-208ENST00000563911 PIDD1Q9HB75 910 aa8.36□□□□□ -1.07
HERPUD1-208ENST00000563911 SPON1Q9HCB6 807 aa8.36□□□□□ -1.07
HERPUD1-208ENST00000563911 PRKAG3Q9UGI9 489 aa8.36□□□□□ -1.07
HERPUD1-208ENST00000563911 SMAD7O15105 426 aaKnown RBP8.35□□□□□ -1.07
HERPUD1-208ENST00000563911 TIAF1O95411 115 aa8.35□□□□□ -1.07
HERPUD1-208ENST00000563911 HCLS1P14317 486 aaPredicted RBP8.35□□□□□ -1.07
HERPUD1-208ENST00000563911 TTLL4Q14679 1199 aa8.35□□□□□ -1.07
HERPUD1-208ENST00000563911 CDC37L1Q7L3B6 337 aa8.35□□□□□ -1.07
HERPUD1-208ENST00000563911 LSRQ86X29 649 aaPredicted RBP8.35□□□□□ -1.07
HERPUD1-208ENST00000563911 RBBP8NLQ8NC74 664 aaPredicted RBP8.35□□□□□ -1.07
HERPUD1-208ENST00000563911 OR6P1Q8NGX9 317 aa8.35□□□□□ -1.07
HERPUD1-208ENST00000563911 ZNF507Q8TCN5 953 aa8.35□□□□□ -1.07
HERPUD1-208ENST00000563911 MPHOSPH9Q99550 1183 aa8.35□□□□□ -1.07
HERPUD1-208ENST00000563911 CEP41Q9BYV8 373 aa8.35□□□□□ -1.07
HERPUD1-208ENST00000563911 LNPKQ9C0E8 428 aa8.35□□□□□ -1.07
HERPUD1-208ENST00000563911 SSU72Q9NP77 194 aaKnown RBP8.35□□□□□ -1.07
HERPUD1-208ENST00000563911 KLHL3Q9UH77 587 aa8.35□□□□□ -1.07
HERPUD1-208ENST00000563911 ANKARQ7Z5J8 1434 aa8.35□□□□□ -1.07
HERPUD1-208ENST00000563911 ADGRB1O14514 1584 aa8.35□□□□□ -1.07
HERPUD1-208ENST00000563911 DHX57Q6P158 1386 aaKnown RBP8.35□□□□□ -1.07
HERPUD1-208ENST00000563911 PARD3Q8TEW0 1356 aa8.35□□□□□ -1.07
HERPUD1-208ENST00000563911 ZBTB7AO95365 584 aa8.34□□□□□ -1.07
HERPUD1-208ENST00000563911 IREB2P48200 963 aaKnown RBP8.34□□□□□ -1.07
HERPUD1-208ENST00000563911 USP11P51784 963 aa8.34□□□□□ -1.07
HERPUD1-208ENST00000563911 TMEM201Q5SNT2 666 aa8.34□□□□□ -1.07
HERPUD1-208ENST00000563911 FAM169BQ8N8A8 192 aa8.34□□□□□ -1.07
HERPUD1-208ENST00000563911 C2CD4AQ8NCU7 369 aaPredicted RBP8.34□□□□□ -1.07
HERPUD1-208ENST00000563911 WFDC12Q8WWY7 111 aa8.34□□□□□ -1.07
HERPUD1-208ENST00000563911 ADAM30Q9UKF2 790 aa8.34□□□□□ -1.07
HERPUD1-208ENST00000563911 ACTL7BQ9Y614 415 aa8.34□□□□□ -1.07
HERPUD1-208ENST00000563911 CASZ1Q86V15 1759 aa8.34□□□□□ -1.07
HERPUD1-208ENST00000563911 SSH2Q76I76 1423 aa8.34□□□□□ -1.07
HERPUD1-208ENST00000563911 ADGRB2O60241 1585 aa8.34□□□□□ -1.07
HERPUD1-208ENST00000563911 NINLQ9Y2I6 1382 aa8.34□□□□□ -1.07
HERPUD1-208ENST00000563911 FAM181BA6NEQ2 426 aa8.33□□□□□ -1.08
HERPUD1-208ENST00000563911 SLC22A31A6NKX4 558 aa8.33□□□□□ -1.08
HERPUD1-208ENST00000563911 GAS2O43903 313 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-208ENST00000563911 NOS3P29474 1203 aa8.33□□□□□ -1.08
HERPUD1-208ENST00000563911 PPP2R5EQ16537 467 aa8.33□□□□□ -1.08
HERPUD1-208ENST00000563911 NBPF8Q3BBV2 869 aa8.33□□□□□ -1.08
HERPUD1-208ENST00000563911 TNNI3KQ59H18 835 aa8.33□□□□□ -1.08
HERPUD1-208ENST00000563911 RUFY4Q6ZNE9 571 aa8.33□□□□□ -1.08
HERPUD1-208ENST00000563911 NRKQ7Z2Y5 1582 aa8.33□□□□□ -1.08
HERPUD1-208ENST00000563911 HID1Q8IV36 788 aa8.33□□□□□ -1.08
HERPUD1-208ENST00000563911 HNRNPLLQ8WVV9 542 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-208ENST00000563911 TMEM40Q8WWA1 233 aa8.33□□□□□ -1.08
HERPUD1-208ENST00000563911 TRIM55Q9BYV6 548 aa8.33□□□□□ -1.08
HERPUD1-208ENST00000563911 PEAK1Q9H792 1746 aa8.33□□□□□ -1.08
HERPUD1-208ENST00000563911 FAM105AQ9NUU6 356 aa8.33□□□□□ -1.08
HERPUD1-208ENST00000563911 GMIPQ9P107 970 aa8.33□□□□□ -1.08
HERPUD1-208ENST00000563911 POGKQ9P215 609 aa8.33□□□□□ -1.08
HERPUD1-208ENST00000563911 DLC1Q96QB1 1528 aa8.33□□□□□ -1.08
HERPUD1-208ENST00000563911 NEFMP07197 916 aa8.32□□□□□ -1.08
HERPUD1-208ENST00000563911 NTF4P34130 210 aa8.32□□□□□ -1.08
HERPUD1-208ENST00000563911 PREPP48147 710 aa8.32□□□□□ -1.08
HERPUD1-208ENST00000563911 C1QTNF8P60827 252 aa8.32□□□□□ -1.08
HERPUD1-208ENST00000563911 CCDC144BQ3MJ40 725 aa8.32□□□□□ -1.08
HERPUD1-208ENST00000563911 ALYREFQ86V81 257 aaKnown RBP8.32□□□□□ -1.08
HERPUD1-208ENST00000563911 KCT2Q8NC54 265 aa8.32□□□□□ -1.08
HERPUD1-208ENST00000563911 NGDNQ8NEJ9 315 aaKnown RBP8.32□□□□□ -1.08
HERPUD1-208ENST00000563911 ACSF2Q96CM8 615 aaPredicted RBP8.32□□□□□ -1.08
HERPUD1-208ENST00000563911 SYT17Q9BSW7 474 aa8.32□□□□□ -1.08
HERPUD1-208ENST00000563911 GSX1Q9H4S2 264 aaPredicted RBP8.32□□□□□ -1.08
HERPUD1-208ENST00000563911 TJP2Q9UDY2 1190 aa8.32□□□□□ -1.08
HERPUD1-208ENST00000563911 MYOM1P52179 1685 aa8.32□□□□□ -1.08
HERPUD1-208ENST00000563911 GPRASP1Q5JY77 1395 aa8.32□□□□□ -1.08
HERPUD1-208ENST00000563911 PHRF1Q9P1Y6 1649 aaKnown RBP8.32□□□□□ -1.08
HERPUD1-208ENST00000563911 LMO7Q8WWI1 1683 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 TULP4Q9NRJ4 1543 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 MEIS3P2A8K0S8 358 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 UPK3BL1B0FP48 263 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 CHURC1-FNTBB4DL54 471 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 UPK3BL2E5RIL1 263 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 U2SURPO15042 1029 aaKnown RBP8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 DNAJA2O60884 412 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 ARSHQ5FYA8 562 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 NBPF6Q5VWK0 638 aa8.31□□□□□ -1.08
HERPUD1-208ENST00000563911 OVOS1Q6IE37 1185 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms