RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 PCDHB14Q9Y5E9 798 aa8.45□□□□□ -1.06
HERPUD1-208ENST00000563911 CSADQ9Y600 493 aa8.45□□□□□ -1.06
HERPUD1-208ENST00000563911 THSD7AQ9UPZ6 1657 aa8.45□□□□□ -1.06
HERPUD1-208ENST00000563911 PRR36Q9H6K5 1346 aa8.45□□□□□ -1.06
HERPUD1-208ENST00000563911 YTHDC2Q9H6S0 1430 aaKnown RBP8.45□□□□□ -1.06
HERPUD1-208ENST00000563911 RRBP1Q9P2E9 1410 aaKnown RBP8.45□□□□□ -1.06
HERPUD1-208ENST00000563911 GFRA2O00451 464 aa8.44□□□□□ -1.06
HERPUD1-208ENST00000563911 SELPP16109 830 aa8.44□□□□□ -1.06
HERPUD1-208ENST00000563911 INSM1Q01101 510 aaPredicted RBP8.44□□□□□ -1.06
HERPUD1-208ENST00000563911 ZC3H12AQ5D1E8 599 aaKnown RBP8.44□□□□□ -1.06
HERPUD1-208ENST00000563911 CCDC81Q6ZN84 652 aa8.44□□□□□ -1.06
HERPUD1-208ENST00000563911 REXO1Q8N1G1 1221 aaKnown RBP8.44□□□□□ -1.06
HERPUD1-208ENST00000563911 ARMC5Q96C12 935 aa8.44□□□□□ -1.06
HERPUD1-208ENST00000563911 DNAJC2Q99543 621 aaKnown RBP8.44□□□□□ -1.06
HERPUD1-208ENST00000563911 SRRTQ9BXP5 876 aaKnown RBP8.44□□□□□ -1.06
HERPUD1-208ENST00000563911 TMPRSS13Q9BYE2 586 aa8.44□□□□□ -1.06
HERPUD1-208ENST00000563911 RNF208Q9H0X6 261 aa8.44□□□□□ -1.06
HERPUD1-208ENST00000563911 PICK1Q9NRD5 415 aa8.44□□□□□ -1.06
HERPUD1-208ENST00000563911 POLR3KQ9Y2Y1 108 aaPredicted RBP8.44□□□□□ -1.06
HERPUD1-208ENST00000563911 MRVI1Q9Y6F6 885 aa8.44□□□□□ -1.06
HERPUD1-208ENST00000563911 KIF1AQ12756 1690 aa8.43□□□□□ -1.06
HERPUD1-208ENST00000563911 TRPM3Q9HCF6 1732 aaPredicted RBP8.43□□□□□ -1.06
HERPUD1-208ENST00000563911 MEGF11A6BM72 1044 aa8.43□□□□□ -1.06
HERPUD1-208ENST00000563911 ID3Q02535 119 aa8.43□□□□□ -1.06
HERPUD1-208ENST00000563911 CLCQ05315 142 aa8.43□□□□□ -1.06
HERPUD1-208ENST00000563911 SHISA2Q6UWI4 295 aa8.43□□□□□ -1.06
HERPUD1-208ENST00000563911 PTF1AQ7RTS3 328 aa8.43□□□□□ -1.06
HERPUD1-208ENST00000563911 ANAPC16Q96DE5 110 aa8.43□□□□□ -1.06
HERPUD1-208ENST00000563911 CRBNQ96SW2 442 aa8.43□□□□□ -1.06
HERPUD1-208ENST00000563911 C14orf93Q9H972 538 aaKnown RBP8.43□□□□□ -1.06
HERPUD1-208ENST00000563911 CYP4F12Q9HCS2 524 aa8.43□□□□□ -1.06
HERPUD1-208ENST00000563911 PIK3C2GO75747 1445 aa8.43□□□□□ -1.06
HERPUD1-208ENST00000563911 CAMTA1Q9Y6Y1 1673 aa8.43□□□□□ -1.06
HERPUD1-208ENST00000563911 RGPD1P0DJD0 1748 aa8.43□□□□□ -1.06
HERPUD1-208ENST00000563911 PRAMEF27A3QJZ7 478 aa8.42□□□□□ -1.06
HERPUD1-208ENST00000563911 APBA3O96018 575 aa8.42□□□□□ -1.06
HERPUD1-208ENST00000563911 CHRNA2Q15822 529 aa8.42□□□□□ -1.06
HERPUD1-208ENST00000563911 CYFIP1Q7L576 1253 aa8.42□□□□□ -1.06
HERPUD1-208ENST00000563911 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.42□□□□□ -1.06
HERPUD1-208ENST00000563911 C12orf50Q8NA57 414 aaPredicted RBP8.42□□□□□ -1.06
HERPUD1-208ENST00000563911 SCARF2Q96GP6 870 aaPredicted RBP8.42□□□□□ -1.06
HERPUD1-208ENST00000563911 PRAM1Q96QH2 718 aa8.42□□□□□ -1.06
HERPUD1-208ENST00000563911 HIRIP3Q9BW71 556 aaPredicted RBP8.42□□□□□ -1.06
HERPUD1-208ENST00000563911 PPP1R9AQ9ULJ8 1098 aa8.42□□□□□ -1.06
HERPUD1-208ENST00000563911 AP4E1Q9UPM8 1137 aa8.42□□□□□ -1.06
HERPUD1-208ENST00000563911 SPATA31A1Q5TZJ5 1347 aa8.42□□□□□ -1.06
HERPUD1-208ENST00000563911 KNDC1Q76NI1 1749 aa8.42□□□□□ -1.06
HERPUD1-208ENST00000563911 IFT172Q9UG01 1749 aa8.41□□□□□ -1.06
HERPUD1-208ENST00000563911 CRYBG1Q9Y4K1 1723 aa8.41□□□□□ -1.06
HERPUD1-208ENST00000563911 ALS2Q96Q42 1657 aa8.41□□□□□ -1.06
HERPUD1-208ENST00000563911 SYNGAP1Q96PV0 1343 aa8.41□□□□□ -1.06
HERPUD1-208ENST00000563911 SPATA31C1P0DKV0 1188 aa8.41□□□□□ -1.06
HERPUD1-208ENST00000563911 EIF6P56537 245 aaKnown RBP8.41□□□□□ -1.06
HERPUD1-208ENST00000563911 AGGF1Q8N302 714 aaeCLIP8.41□□□□□ -1.06
HERPUD1-208ENST00000563911 EHMT1Q9H9B1 1298 aa8.41□□□□□ -1.06
HERPUD1-208ENST00000563911 ZNF408Q9H9D4 720 aa8.41□□□□□ -1.06
HERPUD1-208ENST00000563911 HIF3AQ9Y2N7 669 aa8.41□□□□□ -1.06
HERPUD1-208ENST00000563911 PCDHGC5Q9Y5F6 944 aa8.41□□□□□ -1.06
HERPUD1-208ENST00000563911 CORINQ9Y5Q5 1042 aa8.41□□□□□ -1.06
HERPUD1-208ENST00000563911 NUP188Q5SRE5 1749 aa8.4□□□□□ -1.06
HERPUD1-208ENST00000563911 RREB1Q92766 1687 aa8.4□□□□□ -1.06
HERPUD1-208ENST00000563911 ARHGEF10O15013 1369 aa8.4□□□□□ -1.06
HERPUD1-208ENST00000563911 TMPRSS2O15393 492 aa8.4□□□□□ -1.06
HERPUD1-208ENST00000563911 ALX3O95076 343 aa8.4□□□□□ -1.06
HERPUD1-208ENST00000563911 IMPDH2P12268 514 aa8.4□□□□□ -1.06
HERPUD1-208ENST00000563911 DRD2P14416 443 aa8.4□□□□□ -1.06
HERPUD1-208ENST00000563911 ETFBP38117 255 aa8.4□□□□□ -1.06
HERPUD1-208ENST00000563911 ERVK-24P63145 666 aa8.4□□□□□ -1.06
HERPUD1-208ENST00000563911 PDE4BQ07343 736 aa8.4□□□□□ -1.06
HERPUD1-208ENST00000563911 PPM1JQ5JR12 505 aa8.4□□□□□ -1.06
HERPUD1-208ENST00000563911 FDX2Q6P4F2 183 aa8.4□□□□□ -1.06
HERPUD1-208ENST00000563911 TMEM130Q8N3G9 435 aa8.4□□□□□ -1.06
HERPUD1-208ENST00000563911 SMG8Q8ND04 991 aaKnown RBP8.4□□□□□ -1.06
HERPUD1-208ENST00000563911 SUGCTQ9HAC7 445 aa8.4□□□□□ -1.06
HERPUD1-208ENST00000563911 CRIM1Q9NZV1 1036 aa8.4□□□□□ -1.06
HERPUD1-208ENST00000563911 COL14A1Q05707 1796 aaKnown RBP8.4□□□□□ -1.07
HERPUD1-208ENST00000563911 KIAA0232Q92628 1395 aa8.39□□□□□ -1.07
HERPUD1-208ENST00000563911 F8W735 103 aaPredicted RBP8.39□□□□□ -1.07
HERPUD1-208ENST00000563911 KCNQ2O43526 872 aa8.39□□□□□ -1.07
HERPUD1-208ENST00000563911 ATE1O95260 518 aa8.39□□□□□ -1.07
HERPUD1-208ENST00000563911 HTR3BO95264 441 aa8.39□□□□□ -1.07
HERPUD1-208ENST00000563911 ADH5P11766 374 aa8.39□□□□□ -1.07
HERPUD1-208ENST00000563911 PLCG1P19174 1290 aa8.39□□□□□ -1.07
HERPUD1-208ENST00000563911 ETF1P62495 437 aaKnown RBP8.39□□□□□ -1.07
HERPUD1-208ENST00000563911 SOX4Q06945 474 aaPredicted RBP8.39□□□□□ -1.07
HERPUD1-208ENST00000563911 RBL2Q08999 1139 aa8.39□□□□□ -1.07
HERPUD1-208ENST00000563911 DYMQ7RTS9 669 aa8.39□□□□□ -1.07
HERPUD1-208ENST00000563911 SHDQ96IW2 340 aa8.39□□□□□ -1.07
HERPUD1-208ENST00000563911 ZNRF3Q9ULT6 936 aa8.39□□□□□ -1.07
HERPUD1-208ENST00000563911 TACC3Q9Y6A5 838 aa8.39□□□□□ -1.07
HERPUD1-208ENST00000563911 PGRP06401 933 aa8.38□□□□□ -1.07
HERPUD1-208ENST00000563911 GRK4P32298 578 aa8.38□□□□□ -1.07
HERPUD1-208ENST00000563911 SOGA3Q5TF21 947 aa8.38□□□□□ -1.07
HERPUD1-208ENST00000563911 ANKRD34AQ69YU3 496 aa8.38□□□□□ -1.07
HERPUD1-208ENST00000563911 CKAP2LQ8IYA6 745 aa8.38□□□□□ -1.07
HERPUD1-208ENST00000563911 LENG1Q96BZ8 264 aaPredicted RBP8.38□□□□□ -1.07
HERPUD1-208ENST00000563911 FANCD2OSQ96PS1 177 aa8.38□□□□□ -1.07
HERPUD1-208ENST00000563911 NACC1Q96RE7 527 aa8.38□□□□□ -1.07
HERPUD1-208ENST00000563911 ATXN3LQ9H3M9 355 aa8.38□□□□□ -1.07
HERPUD1-208ENST00000563911 AKTIPQ9H8T0 292 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms