RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 APBB1O00213 710 aa22.48■■□□□ 1.19
SNHG6-204ENST00000521127 ITGB8P26012 769 aa22.48■■□□□ 1.19
SNHG6-204ENST00000521127 TTYH1Q9H313 450 aaPredicted RBP22.48■■□□□ 1.19
SNHG6-204ENST00000521127 FBXO28Q9NVF7 368 aa22.48■■□□□ 1.19
SNHG6-204ENST00000521127 ADAMTS5Q9UNA0 930 aa22.48■■□□□ 1.19
SNHG6-204ENST00000521127 PHF24Q9UPV7 400 aa22.48■■□□□ 1.19
SNHG6-204ENST00000521127 TTC28Q96AY4 2481 aa22.48■■□□□ 1.19
SNHG6-204ENST00000521127 WDR46O15213 610 aaKnown RBP22.47■■□□□ 1.19
SNHG6-204ENST00000521127 MBD4O95243 580 aa22.47■■□□□ 1.19
SNHG6-204ENST00000521127 TAL1P17542 331 aaPredicted RBP22.47■■□□□ 1.19
SNHG6-204ENST00000521127 CDK8P49336 464 aa22.47■■□□□ 1.19
SNHG6-204ENST00000521127 CLASRPQ8N2M8 674 aaKnown RBP22.47■■□□□ 1.19
SNHG6-204ENST00000521127 SLC25A27O95847 323 aa22.46■■□□□ 1.19
SNHG6-204ENST00000521127 CHGBP05060 677 aa22.46■■□□□ 1.19
SNHG6-204ENST00000521127 PGK2P07205 417 aa22.46■■□□□ 1.19
SNHG6-204ENST00000521127 ADD2P35612 726 aa22.46■■□□□ 1.19
SNHG6-204ENST00000521127 SMAD3P84022 425 aaKnown RBP22.46■■□□□ 1.19
SNHG6-204ENST00000521127 C12orf60Q5U649 245 aa22.46■■□□□ 1.19
SNHG6-204ENST00000521127 KIF1BPQ96EK5 621 aa22.46■■□□□ 1.19
SNHG6-204ENST00000521127 CCDC17Q96LX7 622 aa22.46■■□□□ 1.19
SNHG6-204ENST00000521127 MMP19Q99542 508 aa22.46■■□□□ 1.19
SNHG6-204ENST00000521127 SH2D4AQ9H788 454 aa22.46■■□□□ 1.19
SNHG6-204ENST00000521127 XPNPEP3Q9NQH7 507 aa22.46■■□□□ 1.19
SNHG6-204ENST00000521127 ATP8A2Q9NTI2 1148 aa22.46■■□□□ 1.19
SNHG6-204ENST00000521127 NRBP1Q9UHY1 535 aa22.46■■□□□ 1.19
SNHG6-204ENST00000521127 PRUNE2Q8WUY3 3088 aa22.45■■□□□ 1.18
SNHG6-204ENST00000521127 EYSQ5T1H1 3165 aa22.45■■□□□ 1.18
SNHG6-204ENST00000521127 PGK1P00558 417 aa22.45■■□□□ 1.18
SNHG6-204ENST00000521127 EEF2P13639 858 aaKnown RBP22.45■■□□□ 1.18
SNHG6-204ENST00000521127 EPHB4P54760 987 aa22.45■■□□□ 1.18
SNHG6-204ENST00000521127 ZNF792Q3KQV3 632 aa22.45■■□□□ 1.18
SNHG6-204ENST00000521127 RIOX2Q8IUF8 465 aa22.45■■□□□ 1.18
SNHG6-204ENST00000521127 MIER1Q8N108 512 aa22.45■■□□□ 1.18
SNHG6-204ENST00000521127 MAFAQ8NHW3 353 aaPredicted RBP22.45■■□□□ 1.18
SNHG6-204ENST00000521127 MYLIPQ8WY64 445 aa22.45■■□□□ 1.18
SNHG6-204ENST00000521127 TINF2Q9BSI4 451 aa22.45■■□□□ 1.18
SNHG6-204ENST00000521127 USP17L12C9JPN9 530 aa22.44■■□□□ 1.18
SNHG6-204ENST00000521127 USP17L21D6R901 530 aa22.44■■□□□ 1.18
SNHG6-204ENST00000521127 IFIT2P09913 472 aaKnown RBP22.44■■□□□ 1.18
SNHG6-204ENST00000521127 RARBP10826 455 aa22.44■■□□□ 1.18
SNHG6-204ENST00000521127 C16orf86Q6ZW13 317 aa22.44■■□□□ 1.18
SNHG6-204ENST00000521127 SIRT2Q8IXJ6 389 aa22.44■■□□□ 1.18
SNHG6-204ENST00000521127 BCL11AQ9H165 835 aa22.44■■□□□ 1.18
SNHG6-204ENST00000521127 BOLA2Q9H3K6 86 aa22.44■■□□□ 1.18
SNHG6-204ENST00000521127 PAG1Q9NWQ8 432 aa22.44■■□□□ 1.18
SNHG6-204ENST00000521127 PLXNA1Q9UIW2 1896 aa22.44■■□□□ 1.18
SNHG6-204ENST00000521127 TACC3Q9Y6A5 838 aa22.44■■□□□ 1.18
SNHG6-204ENST00000521127 ZNF865P0CJ78 1059 aaPredicted RBP22.43■■□□□ 1.18
SNHG6-204ENST00000521127 HNRNPUQ00839 825 aaKnown RBP eCLIP22.43■■□□□ 1.18
SNHG6-204ENST00000521127 REPS2Q8NFH8 660 aa22.43■■□□□ 1.18
SNHG6-204ENST00000521127 LENG1Q96BZ8 264 aaPredicted RBP22.43■■□□□ 1.18
SNHG6-204ENST00000521127 ZNF214Q9UL59 606 aaPredicted RBP22.43■■□□□ 1.18
SNHG6-204ENST00000521127 VCANP13611 3396 aa22.42■■□□□ 1.18
SNHG6-204ENST00000521127 VWA5AO00534 786 aa22.42■■□□□ 1.18
SNHG6-204ENST00000521127 KIAA0355O15063 1070 aa22.42■■□□□ 1.18
SNHG6-204ENST00000521127 CLTBP09497 229 aa22.42■■□□□ 1.18
SNHG6-204ENST00000521127 STAT3P40763 770 aa22.42■■□□□ 1.18
SNHG6-204ENST00000521127 PPP1R9AQ9ULJ8 1098 aa22.42■■□□□ 1.18
SNHG6-204ENST00000521127 DIS3Q9Y2L1 958 aaKnown RBP22.42■■□□□ 1.18
SNHG6-204ENST00000521127 A0A1W2PQ45 241 aaPredicted RBP22.41■■□□□ 1.18
SNHG6-204ENST00000521127 A0A1W2PQY0 241 aa22.41■■□□□ 1.18
SNHG6-204ENST00000521127 KCTD2Q14681 263 aa22.41■■□□□ 1.18
SNHG6-204ENST00000521127 FAM83BQ5T0W9 1011 aa22.41■■□□□ 1.18
SNHG6-204ENST00000521127 RNF180Q86T96 592 aa22.41■■□□□ 1.18
SNHG6-204ENST00000521127 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.41■■□□□ 1.18
SNHG6-204ENST00000521127 KANSL2Q9H9L4 492 aa22.41■■□□□ 1.18
SNHG6-204ENST00000521127 ROBO3Q96MS0 1386 aa22.4■■□□□ 1.18
SNHG6-204ENST00000521127 ZBED9Q6R2W3 1325 aa22.4■■□□□ 1.18
SNHG6-204ENST00000521127 PQBP1O60828 265 aaKnown RBP22.4■■□□□ 1.18
SNHG6-204ENST00000521127 ADAMTS4O75173 837 aa22.4■■□□□ 1.18
SNHG6-204ENST00000521127 ATP5JP18859 108 aa22.4■■□□□ 1.18
SNHG6-204ENST00000521127 RPAP2Q8IXW5 612 aaPredicted RBP22.4■■□□□ 1.18
SNHG6-204ENST00000521127 RNPC3Q96LT9 517 aaKnown RBP22.4■■□□□ 1.18
SNHG6-204ENST00000521127 CTR9Q6PD62 1173 aa22.39■■□□□ 1.17
SNHG6-204ENST00000521127 HAUS7Q99871 368 aa22.39■■□□□ 1.17
SNHG6-204ENST00000521127 RAB11FIP3O75154 756 aa22.38■■□□□ 1.17
SNHG6-204ENST00000521127 AKR1A1P14550 325 aa22.38■■□□□ 1.17
SNHG6-204ENST00000521127 RAG1P15918 1043 aa22.38■■□□□ 1.17
SNHG6-204ENST00000521127 UBE3CQ15386 1083 aa22.38■■□□□ 1.17
SNHG6-204ENST00000521127 NUP88Q99567 741 aaPredicted RBP22.38■■□□□ 1.17
SNHG6-204ENST00000521127 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.38■■□□□ 1.17
SNHG6-204ENST00000521127 GOPCQ9HD26 462 aa22.38■■□□□ 1.17
SNHG6-204ENST00000521127 SLC4A4Q9Y6R1 1079 aa22.38■■□□□ 1.17
SNHG6-204ENST00000521127 CDH23Q9H251 3354 aa22.38■■□□□ 1.17
SNHG6-204ENST00000521127 MYH7P12883 1935 aa22.37■■□□□ 1.17
SNHG6-204ENST00000521127 RAD21O60216 631 aa22.37■■□□□ 1.17
SNHG6-204ENST00000521127 FOSL2P15408 326 aa22.37■■□□□ 1.17
SNHG6-204ENST00000521127 FAAP100Q0VG06 881 aa22.37■■□□□ 1.17
SNHG6-204ENST00000521127 AMOTL1Q8IY63 956 aa22.37■■□□□ 1.17
SNHG6-204ENST00000521127 KLHDC9Q8NEP7 349 aa22.37■■□□□ 1.17
SNHG6-204ENST00000521127 TSEN34Q9BSV6 310 aaKnown RBP22.37■■□□□ 1.17
SNHG6-204ENST00000521127 PUS7LQ9H0K6 701 aaKnown RBP22.37■■□□□ 1.17
SNHG6-204ENST00000521127 TMEM39AQ9NV64 488 aa22.37■■□□□ 1.17
SNHG6-204ENST00000521127 SPTBN5Q9NRC6 3674 aaKnown RBP22.37■■□□□ 1.17
SNHG6-204ENST00000521127 GREB1LQ9C091 1923 aaPredicted RBP22.36■■□□□ 1.17
SNHG6-204ENST00000521127 HMMRO75330 724 aa22.36■■□□□ 1.17
SNHG6-204ENST00000521127 SNAI1O95863 264 aaPredicted RBP22.36■■□□□ 1.17
SNHG6-204ENST00000521127 COPB2P35606 906 aa22.36■■□□□ 1.17
SNHG6-204ENST00000521127 ACLYP53396 1101 aa22.36■■□□□ 1.17
SNHG6-204ENST00000521127 FPGSQ05932 587 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms