RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 EXOC6BQ9Y2D4 811 aa22.61■■□□□ 1.21
SNHG6-204ENST00000521127 LTBP2Q14767 1821 aa22.6■■□□□ 1.21
SNHG6-204ENST00000521127 MAGEB6P1A0A0J9YX57 407 aa22.6■■□□□ 1.21
SNHG6-204ENST00000521127 COBLO75128 1261 aa22.6■■□□□ 1.21
SNHG6-204ENST00000521127 OLFML2BQ68BL8 750 aa22.6■■□□□ 1.21
SNHG6-204ENST00000521127 SPATC1LQ9H0A9 340 aa22.6■■□□□ 1.21
SNHG6-204ENST00000521127 HOXC10Q9NYD6 342 aa22.6■■□□□ 1.21
SNHG6-204ENST00000521127 NAV1Q8NEY1 1877 aa22.6■■□□□ 1.21
SNHG6-204ENST00000521127 ZNF236Q9UL36 1845 aa22.59■■□□□ 1.21
SNHG6-204ENST00000521127 STRNO43815 780 aa22.59■■□□□ 1.21
SNHG6-204ENST00000521127 PDE6AP16499 860 aa22.59■■□□□ 1.21
SNHG6-204ENST00000521127 ERCC3P19447 782 aa22.59■■□□□ 1.21
SNHG6-204ENST00000521127 FTSJ3Q8IY81 847 aaKnown RBP22.59■■□□□ 1.21
SNHG6-204ENST00000521127 COL25A1Q9BXS0 654 aaPredicted RBP22.59■■□□□ 1.21
SNHG6-204ENST00000521127 MCM9Q9NXL9 1143 aa22.59■■□□□ 1.21
SNHG6-204ENST00000521127 ATP11BQ9Y2G3 1177 aa22.59■■□□□ 1.21
SNHG6-204ENST00000521127 MPHOSPH10O00566 681 aaKnown RBP22.58■■□□□ 1.21
SNHG6-204ENST00000521127 CYP2D6P10635 497 aa22.58■■□□□ 1.21
SNHG6-204ENST00000521127 PRAMEF19Q5SWL8 479 aa22.58■■□□□ 1.21
SNHG6-204ENST00000521127 SLC39A5Q6ZMH5 540 aa22.58■■□□□ 1.21
SNHG6-204ENST00000521127 SLC44A5Q8NCS7 719 aa22.58■■□□□ 1.21
SNHG6-204ENST00000521127 ARRDC4Q8NCT1 418 aa22.58■■□□□ 1.21
SNHG6-204ENST00000521127 SHCBP1Q8NEM2 672 aa22.58■■□□□ 1.21
SNHG6-204ENST00000521127 CRNKL1Q9BZJ0 848 aaKnown RBP22.58■■□□□ 1.21
SNHG6-204ENST00000521127 TANGO6Q9C0B7 1094 aa22.58■■□□□ 1.21
SNHG6-204ENST00000521127 PRKAG2Q9UGJ0 569 aa22.58■■□□□ 1.21
SNHG6-204ENST00000521127 A0A0G2JMZ2 1700 aa22.57■■□□□ 1.2
SNHG6-204ENST00000521127 DSG3P32926 999 aa22.57■■□□□ 1.2
SNHG6-204ENST00000521127 SHHQ15465 462 aa22.57■■□□□ 1.2
SNHG6-204ENST00000521127 SLC9C2Q5TAH2 1124 aa22.57■■□□□ 1.2
SNHG6-204ENST00000521127 SIAH1Q8IUQ4 282 aa22.57■■□□□ 1.2
SNHG6-204ENST00000521127 SDR42E1Q8WUS8 393 aa22.57■■□□□ 1.2
SNHG6-204ENST00000521127 IL1RAPL2Q9NP60 686 aa22.57■■□□□ 1.2
SNHG6-204ENST00000521127 SEPT4O43236 478 aa22.56■■□□□ 1.2
SNHG6-204ENST00000521127 C9orf50Q5SZB4 431 aa22.56■■□□□ 1.2
SNHG6-204ENST00000521127 ERC1Q8IUD2 1116 aa22.56■■□□□ 1.2
SNHG6-204ENST00000521127 CLEC10AQ8IUN9 316 aa22.56■■□□□ 1.2
SNHG6-204ENST00000521127 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.56■■□□□ 1.2
SNHG6-204ENST00000521127 DCP1AQ9NPI6 582 aaPredicted RBP22.56■■□□□ 1.2
SNHG6-204ENST00000521127 SMCHD1A6NHR9 2005 aa22.56■■□□□ 1.2
SNHG6-204ENST00000521127 ZNF532Q9HCE3 1301 aa22.56■■□□□ 1.2
SNHG6-204ENST00000521127 TCRBV5S4A2TA0A5A2 114 aa22.55■■□□□ 1.2
SNHG6-204ENST00000521127 SNX17Q15036 470 aa22.55■■□□□ 1.2
SNHG6-204ENST00000521127 TRIM60Q495X7 471 aa22.55■■□□□ 1.2
SNHG6-204ENST00000521127 LCORLQ8N3X6 602 aa22.55■■□□□ 1.2
SNHG6-204ENST00000521127 ATG4CQ96DT6 458 aa22.55■■□□□ 1.2
SNHG6-204ENST00000521127 DYNLL2Q96FJ2 89 aa22.55■■□□□ 1.2
SNHG6-204ENST00000521127 ZNFX1Q9P2E3 1918 aaKnown RBP22.55■■□□□ 1.2
SNHG6-204ENST00000521127 KBTBD13C9JR72 458 aa22.54■■□□□ 1.2
SNHG6-204ENST00000521127 ADCYAP1R1P41586 468 aa22.54■■□□□ 1.2
SNHG6-204ENST00000521127 PLS1Q14651 629 aa22.54■■□□□ 1.2
SNHG6-204ENST00000521127 TTF1Q15361 905 aaPredicted RBP22.54■■□□□ 1.2
SNHG6-204ENST00000521127 ZNF697Q5TEC3 545 aa22.54■■□□□ 1.2
SNHG6-204ENST00000521127 TMEM179Q6ZVK1 233 aa22.54■■□□□ 1.2
SNHG6-204ENST00000521127 MB21D1Q8N884 522 aa22.54■■□□□ 1.2
SNHG6-204ENST00000521127 RHPN1Q8TCX5 695 aa22.54■■□□□ 1.2
SNHG6-204ENST00000521127 BADQ92934 168 aa22.54■■□□□ 1.2
SNHG6-204ENST00000521127 MROH8Q9H579 483 aa22.54■■□□□ 1.2
SNHG6-204ENST00000521127 SMIM22K7EJ46 135 aa22.53■■□□□ 1.2
SNHG6-204ENST00000521127 MYCNP04198 464 aaPredicted RBP22.53■■□□□ 1.2
SNHG6-204ENST00000521127 AKR1B1P15121 316 aa22.53■■□□□ 1.2
SNHG6-204ENST00000521127 LRRC41Q15345 812 aa22.53■■□□□ 1.2
SNHG6-204ENST00000521127 SH3RF1Q7Z6J0 888 aa22.53■■□□□ 1.2
SNHG6-204ENST00000521127 NCAPG2Q86XI2 1143 aa22.53■■□□□ 1.2
SNHG6-204ENST00000521127 ABRAQ8N0Z2 381 aa22.53■■□□□ 1.2
SNHG6-204ENST00000521127 SPICE1Q8N0Z3 855 aa22.53■■□□□ 1.2
SNHG6-204ENST00000521127 FERMT2Q96AC1 680 aa22.53■■□□□ 1.2
SNHG6-204ENST00000521127 MAML3Q96JK9 1138 aa22.53■■□□□ 1.2
SNHG6-204ENST00000521127 PRDM5Q9NQX1 630 aaPredicted RBP22.53■■□□□ 1.2
SNHG6-204ENST00000521127 PDLIM7Q9NR12 457 aa22.53■■□□□ 1.2
SNHG6-204ENST00000521127 TMX2Q9Y320 296 aa22.53■■□□□ 1.2
SNHG6-204ENST00000521127 TRIM43BA6NCK2 446 aa22.52■■□□□ 1.2
SNHG6-204ENST00000521127 GOLIM4O00461 696 aa22.52■■□□□ 1.2
SNHG6-204ENST00000521127 PRKAB2O43741 272 aa22.52■■□□□ 1.2
SNHG6-204ENST00000521127 FLOT1O75955 427 aa22.52■■□□□ 1.2
SNHG6-204ENST00000521127 SLFNL1Q499Z3 407 aa22.52■■□□□ 1.2
SNHG6-204ENST00000521127 FAM47AQ5JRC9 791 aa22.52■■□□□ 1.2
SNHG6-204ENST00000521127 TRIM43Q96BQ3 446 aaPredicted RBP22.52■■□□□ 1.2
SNHG6-204ENST00000521127 CDX2Q99626 313 aaPredicted RBP22.52■■□□□ 1.2
SNHG6-204ENST00000521127 ARMT1Q9H993 441 aa22.52■■□□□ 1.2
SNHG6-204ENST00000521127 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.51■■□□□ 1.19
SNHG6-204ENST00000521127 DNAJC2Q99543 621 aaKnown RBP22.51■■□□□ 1.19
SNHG6-204ENST00000521127 SEMA6BQ9H3T3 888 aa22.51■■□□□ 1.19
SNHG6-204ENST00000521127 VCPKMTQ9H867 229 aa22.51■■□□□ 1.19
SNHG6-204ENST00000521127 SLC5A4Q9NY91 659 aa22.51■■□□□ 1.19
SNHG6-204ENST00000521127 SWAP70Q9UH65 585 aa22.51■■□□□ 1.19
SNHG6-204ENST00000521127 PARP14Q460N5 1801 aa22.51■■□□□ 1.19
SNHG6-204ENST00000521127 ICA1Q05084 483 aa22.5■■□□□ 1.19
SNHG6-204ENST00000521127 TMEM132BQ14DG7 1078 aa22.5■■□□□ 1.19
SNHG6-204ENST00000521127 SAMD1Q6SPF0 538 aaPredicted RBP22.5■■□□□ 1.19
SNHG6-204ENST00000521127 PANK1Q8TE04 598 aa22.5■■□□□ 1.19
SNHG6-204ENST00000521127 ARHGEF10LQ9HCE6 1279 aa22.5■■□□□ 1.19
SNHG6-204ENST00000521127 MYH8P13535 1937 aa22.5■■□□□ 1.19
SNHG6-204ENST00000521127 BAZ2AQ9UIF9 1905 aaKnown RBP22.5■■□□□ 1.19
SNHG6-204ENST00000521127 CYP2D7A0A087X1C5 515 aa22.49■■□□□ 1.19
SNHG6-204ENST00000521127 FCER1AP12319 257 aa22.49■■□□□ 1.19
SNHG6-204ENST00000521127 TLE2Q04725 743 aa22.49■■□□□ 1.19
SNHG6-204ENST00000521127 HSP90AB4PQ58FF6 505 aa22.49■■□□□ 1.19
SNHG6-204ENST00000521127 C1orf53Q5VUE5 145 aa22.49■■□□□ 1.19
SNHG6-204ENST00000521127 COL11A1P12107 1806 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms