RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 SSPNQ14714 243 aa5.55□□□□□ -1.52
NPHP3-206ENST00000474871 SYCP2LQ5T4T6 812 aa5.55□□□□□ -1.52
NPHP3-206ENST00000474871 DCAF8Q5TAQ9 597 aa5.55□□□□□ -1.52
NPHP3-206ENST00000474871 NCCRP1Q6ZVX7 275 aaPredicted RBP5.55□□□□□ -1.52
NPHP3-206ENST00000474871 ARMC9Q7Z3E5 817 aa5.55□□□□□ -1.52
NPHP3-206ENST00000474871 KRI1Q8N9T8 703 aaKnown RBP5.55□□□□□ -1.52
NPHP3-206ENST00000474871 GIMAP5Q96F15 307 aa5.55□□□□□ -1.52
NPHP3-206ENST00000474871 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.55□□□□□ -1.52
NPHP3-206ENST00000474871 NACAP1Q9BZK3 213 aa5.55□□□□□ -1.52
NPHP3-206ENST00000474871 CCDC39Q9UFE4 941 aa5.55□□□□□ -1.52
NPHP3-206ENST00000474871 CDK4P11802 303 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 TMEM132EQ6IEE7 984 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 SPDYE1Q8NFV5 336 aaPredicted RBP5.54□□□□□ -1.52
NPHP3-206ENST00000474871 TCP11Q8WWU5 503 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 ZKSCAN4Q969J2 545 aaPredicted RBP5.54□□□□□ -1.52
NPHP3-206ENST00000474871 EXOC1Q9NV70 894 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 KNDC1Q76NI1 1749 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 RIMS2Q9UQ26 1411 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 STAT3P40763 770 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 B2MP61769 119 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 LSMEM2Q8N112 164 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 USP26Q9BXU7 913 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 ZNF69Q9UC07 566 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 AGO2Q9UKV8 859 aaKnown RBP5.54□□□□□ -1.52
NPHP3-206ENST00000474871 DLC1Q96QB1 1528 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 RASA4O43374 803 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 RBBP5Q15291 538 aaKnown RBP5.54□□□□□ -1.52
NPHP3-206ENST00000474871 TOMM20Q15388 145 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 PROSER3Q2NL68 480 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 SPC24Q8NBT2 197 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 CDK5RAP3Q96JB5 506 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 GBP4Q96PP9 640 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 TYW1Q9NV66 732 aaKnown RBP5.54□□□□□ -1.52
NPHP3-206ENST00000474871 PIH1D1Q9NWS0 290 aaKnown RBP5.54□□□□□ -1.52
NPHP3-206ENST00000474871 STAP2Q9UGK3 403 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 YTHDC2Q9H6S0 1430 aaKnown RBP5.54□□□□□ -1.52
NPHP3-206ENST00000474871 APBB3O95704 486 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 OAS2P29728 719 aaKnown RBP5.54□□□□□ -1.52
NPHP3-206ENST00000474871 PDE4DQ08499 809 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 NFX1Q12986 1120 aaKnown RBP5.54□□□□□ -1.52
NPHP3-206ENST00000474871 LVRNQ6Q4G3 990 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 THUMPD2Q9BTF0 503 aaKnown RBP5.54□□□□□ -1.52
NPHP3-206ENST00000474871 OCEL1Q9H607 264 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 HOMER3Q9NSC5 361 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 STK32BQ9NY57 414 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 RGL1Q9NZL6 768 aa5.54□□□□□ -1.52
NPHP3-206ENST00000474871 A6NCN8 305 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 PPP1R37O75864 691 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 PCNAP12004 261 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 OXCT1P55809 520 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 G3BP1Q13283 466 aaKnown RBP eCLIP5.53□□□□□ -1.52
NPHP3-206ENST00000474871 WASHC4Q2M389 1173 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 CCDC34Q96HJ3 373 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 RBM14Q96PK6 669 aaKnown RBP5.53□□□□□ -1.52
NPHP3-206ENST00000474871 NLRP2Q9NX02 1062 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 ATAD2Q6PL18 1390 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 GFPT2O94808 682 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 TPM1P09493 284 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 HSPA1AP0DMV8 641 aaKnown RBP5.53□□□□□ -1.52
NPHP3-206ENST00000474871 HSPA1BP0DMV9 641 aaKnown RBP5.53□□□□□ -1.52
NPHP3-206ENST00000474871 S100A5P33763 92 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 SLC16A2P36021 539 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 CDK17Q00537 523 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 PDE3BQ13370 1112 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 NAA30Q147X3 362 aaPredicted RBP5.53□□□□□ -1.52
NPHP3-206ENST00000474871 RCN1Q15293 331 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 NEPROQ6NW34 567 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 CCDC129Q6ZRS4 1044 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 TMC2Q8TDI7 906 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 SH3GL1Q99961 368 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 IKBKGQ9Y6K9 419 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 BLMP54132 1417 aaPredicted RBP5.53□□□□□ -1.52
NPHP3-206ENST00000474871 ENPP3O14638 875 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 GNAT2P19087 354 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 MSNP26038 577 aaKnown RBP5.53□□□□□ -1.52
NPHP3-206ENST00000474871 TPTE2Q6XPS3 522 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 ARRDC4Q8NCT1 418 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 LRRC45Q96CN5 670 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 NLRP3Q96P20 1036 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 TTPALQ9BTX7 342 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 TNMDQ9H2S6 317 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 RIC8AQ9NPQ8 531 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 CNTN3Q9P232 1028 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 TNRQ92752 1358 aa5.53□□□□□ -1.52
NPHP3-206ENST00000474871 TBX3O15119 743 aa5.52□□□□□ -1.53
NPHP3-206ENST00000474871 KPNA6O60684 536 aa5.52□□□□□ -1.53
NPHP3-206ENST00000474871 SKAP2O75563 359 aaPredicted RBP5.52□□□□□ -1.53
NPHP3-206ENST00000474871 CD9P21926 228 aa5.52□□□□□ -1.53
NPHP3-206ENST00000474871 INPP5BP32019 993 aa5.52□□□□□ -1.53
NPHP3-206ENST00000474871 MATR3P43243 847 aaKnown RBP eCLIP5.52□□□□□ -1.53
NPHP3-206ENST00000474871 USP5P45974 858 aa5.52□□□□□ -1.53
NPHP3-206ENST00000474871 MAP3K9P80192 1104 aa5.52□□□□□ -1.53
NPHP3-206ENST00000474871 THEMIS2Q5TEJ8 643 aa5.52□□□□□ -1.53
NPHP3-206ENST00000474871 USP38Q8NB14 1042 aa5.52□□□□□ -1.53
NPHP3-206ENST00000474871 TMEM87AQ8NBN3 555 aa5.52□□□□□ -1.53
NPHP3-206ENST00000474871 SUN5Q8TC36 379 aa5.52□□□□□ -1.53
NPHP3-206ENST00000474871 CUL5Q93034 780 aa5.52□□□□□ -1.53
NPHP3-206ENST00000474871 NEK1Q96PY6 1258 aa5.52□□□□□ -1.53
NPHP3-206ENST00000474871 CLK4Q9HAZ1 481 aaKnown RBP5.52□□□□□ -1.53
NPHP3-206ENST00000474871 IFT57Q9NWB7 429 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms