RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 ZNF341Q9BYN7 854 aa23.13■■□□□ 1.29
PTPN18-207ENST00000462321 GINM1Q9NU53 330 aa23.13■■□□□ 1.29
PTPN18-207ENST00000462321 SYNPO2Q9UMS6 1093 aa23.13■■□□□ 1.29
PTPN18-207ENST00000462321 ZDHHC9Q9Y397 364 aa23.13■■□□□ 1.29
PTPN18-207ENST00000462321 PLEKHA8P1O95397 391 aa23.12■■□□□ 1.29
PTPN18-207ENST00000462321 FUT2Q10981 343 aa23.12■■□□□ 1.29
PTPN18-207ENST00000462321 SUPT20HL1Q3ZLR7 823 aa23.12■■□□□ 1.29
PTPN18-207ENST00000462321 NBPF11Q86T75 865 aa23.12■■□□□ 1.29
PTPN18-207ENST00000462321 TRIM22Q8IYM9 498 aa23.12■■□□□ 1.29
PTPN18-207ENST00000462321 MAD2L2Q9UI95 211 aa23.12■■□□□ 1.29
PTPN18-207ENST00000462321 SSC5DA1L4H1 1573 aa23.11■■□□□ 1.29
PTPN18-207ENST00000462321 ASNSP08243 561 aa23.11■■□□□ 1.29
PTPN18-207ENST00000462321 SNHG28P0DPA3 235 aa23.11■■□□□ 1.29
PTPN18-207ENST00000462321 PRAMEF18Q5VWM3 479 aa23.11■■□□□ 1.29
PTPN18-207ENST00000462321 SIAH1Q8IUQ4 282 aa23.11■■□□□ 1.29
PTPN18-207ENST00000462321 SLC26A6Q9BXS9 759 aa23.11■■□□□ 1.29
PTPN18-207ENST00000462321 RNF26Q9BY78 433 aaPredicted RBP23.11■■□□□ 1.29
PTPN18-207ENST00000462321 PALM3A6NDB9 673 aaPredicted RBP23.11■■□□□ 1.29
PTPN18-207ENST00000462321 PARP1P09874 1014 aaKnown RBP23.11■■□□□ 1.29
PTPN18-207ENST00000462321 PDHBP11177 359 aa23.11■■□□□ 1.29
PTPN18-207ENST00000462321 KRT26Q7Z3Y9 468 aa23.11■■□□□ 1.29
PTPN18-207ENST00000462321 LZTS2Q9BRK4 669 aa23.11■■□□□ 1.29
PTPN18-207ENST00000462321 MTMR6Q9Y217 621 aa23.11■■□□□ 1.29
PTPN18-207ENST00000462321 CTNND1O60716 968 aaKnown RBP23.1■■□□□ 1.29
PTPN18-207ENST00000462321 CMTR1Q8N1G2 835 aaKnown RBP23.1■■□□□ 1.29
PTPN18-207ENST00000462321 WASF1Q92558 559 aa23.1■■□□□ 1.29
PTPN18-207ENST00000462321 ZNF112Q9UJU3 913 aa23.1■■□□□ 1.29
PTPN18-207ENST00000462321 MTMR7Q9Y216 660 aa23.1■■□□□ 1.29
PTPN18-207ENST00000462321 CNTNAP5Q8WYK1 1306 aa23.09■■□□□ 1.29
PTPN18-207ENST00000462321 ADM5C9JUS6 153 aa23.09■■□□□ 1.29
PTPN18-207ENST00000462321 EAPPQ56P03 285 aaPredicted RBP23.09■■□□□ 1.29
PTPN18-207ENST00000462321 STAG2Q8N3U4 1231 aa23.09■■□□□ 1.29
PTPN18-207ENST00000462321 SRBD1Q8N5C6 995 aaKnown RBP23.09■■□□□ 1.29
PTPN18-207ENST00000462321 RGS22Q8NE09 1264 aa23.09■■□□□ 1.29
PTPN18-207ENST00000462321 TNPO1Q92973 898 aaKnown RBP23.09■■□□□ 1.29
PTPN18-207ENST00000462321 ARHGEF10LQ9HCE6 1279 aa23.09■■□□□ 1.29
PTPN18-207ENST00000462321 VPS37CA5D8V6 355 aaPredicted RBP23.08■■□□□ 1.29
PTPN18-207ENST00000462321 USP17L5A8MUK1 530 aa23.08■■□□□ 1.29
PTPN18-207ENST00000462321 DEXIO95424 95 aa23.08■■□□□ 1.29
PTPN18-207ENST00000462321 ZSCAN22P10073 491 aaPredicted RBP23.08■■□□□ 1.29
PTPN18-207ENST00000462321 ASPRV1Q53RT3 343 aa23.08■■□□□ 1.29
PTPN18-207ENST00000462321 CCDC82Q8N4S0 544 aa23.08■■□□□ 1.29
PTPN18-207ENST00000462321 GMCL1P1Q8NEA9 526 aa23.08■■□□□ 1.29
PTPN18-207ENST00000462321 PRPF3O43395 683 aaKnown RBP23.08■■□□□ 1.28
PTPN18-207ENST00000462321 AKAP17AQ02040 695 aaKnown RBP23.08■■□□□ 1.28
PTPN18-207ENST00000462321 USP17L2Q6R6M4 530 aa23.08■■□□□ 1.28
PTPN18-207ENST00000462321 RASGRP2Q7LDG7 609 aa23.08■■□□□ 1.28
PTPN18-207ENST00000462321 ALG1Q9BT22 464 aa23.08■■□□□ 1.28
PTPN18-207ENST00000462321 H3BQV1 296 aa23.07■■□□□ 1.28
PTPN18-207ENST00000462321 IFFO2Q5TF58 517 aa23.07■■□□□ 1.28
PTPN18-207ENST00000462321 USP48Q86UV5 1035 aa23.07■■□□□ 1.28
PTPN18-207ENST00000462321 C8orf76Q96K31 380 aa23.07■■□□□ 1.28
PTPN18-207ENST00000462321 RBM27Q9P2N5 1060 aaKnown RBP23.07■■□□□ 1.28
PTPN18-207ENST00000462321 MYH4Q9Y623 1939 aa23.06■■□□□ 1.28
PTPN18-207ENST00000462321 KLRF2D3W0D1 207 aa23.06■■□□□ 1.28
PTPN18-207ENST00000462321 SMARCA1P28370 1054 aa23.06■■□□□ 1.28
PTPN18-207ENST00000462321 GPATCH4Q5T3I0 446 aaKnown RBP23.06■■□□□ 1.28
PTPN18-207ENST00000462321 CDC37L1Q7L3B6 337 aa23.06■■□□□ 1.28
PTPN18-207ENST00000462321 DCAF4Q8WV16 495 aa23.06■■□□□ 1.28
PTPN18-207ENST00000462321 KLRG1Q96E93 195 aa23.06■■□□□ 1.28
PTPN18-207ENST00000462321 WRNIP1Q96S55 665 aa23.06■■□□□ 1.28
PTPN18-207ENST00000462321 SH2D4AQ9H788 454 aa23.06■■□□□ 1.28
PTPN18-207ENST00000462321 TMX2Q9Y320 296 aa23.06■■□□□ 1.28
PTPN18-207ENST00000462321 A0A1W2PRG0 241 aa23.05■■□□□ 1.28
PTPN18-207ENST00000462321 F13A1P00488 732 aa23.05■■□□□ 1.28
PTPN18-207ENST00000462321 GOLGA8HP0CJ92 632 aa23.05■■□□□ 1.28
PTPN18-207ENST00000462321 INPP5BP32019 993 aa23.05■■□□□ 1.28
PTPN18-207ENST00000462321 ZNF543Q08ER8 600 aa23.05■■□□□ 1.28
PTPN18-207ENST00000462321 SCYL3Q8IZE3 742 aa23.05■■□□□ 1.28
PTPN18-207ENST00000462321 SPZ1Q9BXG8 430 aa23.05■■□□□ 1.28
PTPN18-207ENST00000462321 VEGFAP15692 232 aaPredicted RBP23.05■■□□□ 1.28
PTPN18-207ENST00000462321 FOXD4L5Q5VV16 416 aaPredicted RBP23.05■■□□□ 1.28
PTPN18-207ENST00000462321 SLFN13Q68D06 897 aa23.05■■□□□ 1.28
PTPN18-207ENST00000462321 FBXO18Q8NFZ0 1043 aa23.05■■□□□ 1.28
PTPN18-207ENST00000462321 FOXD4L4Q8WXT5 416 aaPredicted RBP23.05■■□□□ 1.28
PTPN18-207ENST00000462321 GMCL1Q96IK5 515 aa23.05■■□□□ 1.28
PTPN18-207ENST00000462321 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.05■■□□□ 1.28
PTPN18-207ENST00000462321 F5H6K3 240 aa23.04■■□□□ 1.28
PTPN18-207ENST00000462321 UBE2Q2LH0YL09 131 aa23.04■■□□□ 1.28
PTPN18-207ENST00000462321 FOSBP53539 338 aa23.04■■□□□ 1.28
PTPN18-207ENST00000462321 KLRC3Q07444 240 aa23.04■■□□□ 1.28
PTPN18-207ENST00000462321 CLEC17AQ6ZS10 378 aa23.04■■□□□ 1.28
PTPN18-207ENST00000462321 ACER1Q8TDN7 264 aa23.04■■□□□ 1.28
PTPN18-207ENST00000462321 AIFM3Q96NN9 605 aa23.04■■□□□ 1.28
PTPN18-207ENST00000462321 V9GY48 417 aaPredicted RBP23.04■■□□□ 1.28
PTPN18-207ENST00000462321 FRMPD2Q68DX3 1309 aaPredicted RBP23.04■■□□□ 1.28
PTPN18-207ENST00000462321 NDUFB10O96000 172 aa23.03■■□□□ 1.28
PTPN18-207ENST00000462321 ECE1P42892 770 aa23.03■■□□□ 1.28
PTPN18-207ENST00000462321 SLC1A4P43007 532 aa23.03■■□□□ 1.28
PTPN18-207ENST00000462321 PKN1Q16512 942 aa23.03■■□□□ 1.28
PTPN18-207ENST00000462321 CCDC96Q2M329 555 aa23.03■■□□□ 1.28
PTPN18-207ENST00000462321 NOL9Q5SY16 702 aaKnown RBP23.03■■□□□ 1.28
PTPN18-207ENST00000462321 CDCA5Q96FF9 252 aa23.03■■□□□ 1.28
PTPN18-207ENST00000462321 GOPCQ9HD26 462 aa23.03■■□□□ 1.28
PTPN18-207ENST00000462321 ATAD5Q96QE3 1844 aa23.03■■□□□ 1.28
PTPN18-207ENST00000462321 CYTH3O43739 400 aa23.02■■□□□ 1.28
PTPN18-207ENST00000462321 NF2P35240 595 aa23.02■■□□□ 1.28
PTPN18-207ENST00000462321 SLC35G1Q2M3R5 365 aa23.02■■□□□ 1.28
PTPN18-207ENST00000462321 DLK2Q6UY11 383 aa23.02■■□□□ 1.28
PTPN18-207ENST00000462321 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms