RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 PCDHGC5Q9Y5F6 944 aa5.59□□□□□ -1.51
NPHP3-206ENST00000474871 ZNF189O75820 626 aaPredicted RBP5.59□□□□□ -1.52
NPHP3-206ENST00000474871 MCM4P33991 863 aa5.59□□□□□ -1.52
NPHP3-206ENST00000474871 GNALP38405 381 aa5.59□□□□□ -1.52
NPHP3-206ENST00000474871 CORO7P57737 925 aa5.59□□□□□ -1.52
NPHP3-206ENST00000474871 EXOC6Q8TAG9 804 aa5.59□□□□□ -1.52
NPHP3-206ENST00000474871 TSGA13Q96PP4 275 aa5.59□□□□□ -1.52
NPHP3-206ENST00000474871 MRS2Q9HD23 443 aa5.59□□□□□ -1.52
NPHP3-206ENST00000474871 DDX56Q9NY93 547 aaKnown RBP5.59□□□□□ -1.52
NPHP3-206ENST00000474871 KIAA1257Q9ULG3 409 aa5.59□□□□□ -1.52
NPHP3-206ENST00000474871 CLEC11AQ9Y240 323 aa5.59□□□□□ -1.52
NPHP3-206ENST00000474871 SETD1AO15047 1707 aaKnown RBP5.59□□□□□ -1.52
NPHP3-206ENST00000474871 DYTNA2CJ06 578 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 PITPNM1O00562 1244 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 NCK2O43639 380 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 OPA1O60313 960 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 PAHP00439 452 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 IDI1Q13907 227 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 LRP8Q14114 963 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 GRAMD2AQ8IUY3 354 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 RBM18Q96H35 190 aaKnown RBP5.58□□□□□ -1.52
NPHP3-206ENST00000474871 MPP4Q96JB8 637 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 TCHPQ9BT92 498 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 MRPL46Q9H2W6 279 aaKnown RBP5.58□□□□□ -1.52
NPHP3-206ENST00000474871 UBAP1Q9NZ09 502 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.58□□□□□ -1.52
NPHP3-206ENST00000474871 POLG2Q9UHN1 485 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 CNPY2Q9Y2B0 182 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 ATP6V0A2Q9Y487 856 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 M0QX08 132 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 BAG4O95429 457 aaKnown RBP5.58□□□□□ -1.52
NPHP3-206ENST00000474871 RPN1P04843 607 aaKnown RBP5.58□□□□□ -1.52
NPHP3-206ENST00000474871 MSL3P1P0C860 447 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 UBL4AP11441 157 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 PAPOLAP51003 745 aaKnown RBP5.58□□□□□ -1.52
NPHP3-206ENST00000474871 COPAP53621 1224 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 FLIIQ13045 1269 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 TMC4Q7Z404 712 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 DDX21Q9NR30 783 aaKnown RBP eCLIP5.58□□□□□ -1.52
NPHP3-206ENST00000474871 EXOC6BQ9Y2D4 811 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 PTPRMP28827 1452 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 MYBBP1AQ9BQG0 1328 aaKnown RBP5.58□□□□□ -1.52
NPHP3-206ENST00000474871 hCG_2014768A0A024R1R8 64 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 VAMP1P23763 118 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 BCL2A1Q16548 175 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 ZNF449Q6P9G9 518 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 USP48Q86UV5 1035 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 AADATQ8N5Z0 425 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 ARMC2Q8NEN0 867 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 WDR66Q8TBY9 1149 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 WDR37Q9Y2I8 494 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 FHOD1Q9Y613 1164 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 ADAMTSL3P82987 1691 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 ELL2O00472 640 aaPredicted RBP5.58□□□□□ -1.52
NPHP3-206ENST00000474871 LDHAP00338 332 aaKnown RBP5.58□□□□□ -1.52
NPHP3-206ENST00000474871 SFTPCP11686 197 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 ZNF131P52739 623 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 PPIDQ08752 370 aaKnown RBP5.58□□□□□ -1.52
NPHP3-206ENST00000474871 FBXO31Q5XUX0 539 aaPredicted RBP5.58□□□□□ -1.52
NPHP3-206ENST00000474871 MSL1Q68DK7 614 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 REM2Q8IYK8 340 aaPredicted RBP5.58□□□□□ -1.52
NPHP3-206ENST00000474871 FBXO18Q8NFZ0 1043 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 MRFAP1L1Q96HT8 127 aa5.58□□□□□ -1.52
NPHP3-206ENST00000474871 MAK16Q9BXY0 300 aaKnown RBP5.58□□□□□ -1.52
NPHP3-206ENST00000474871 A2ML1A8K2U0 1454 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 RNF8O76064 485 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 PCP11498 1178 aaKnown RBP5.57□□□□□ -1.52
NPHP3-206ENST00000474871 LMNB2Q03252 620 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 KMT5BQ4FZB7 885 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 RTF1Q92541 710 aaKnown RBP5.57□□□□□ -1.52
NPHP3-206ENST00000474871 PARD6BQ9BYG5 372 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 AS3MTQ9HBK9 375 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 SSX2IPQ9Y2D8 614 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 C2CD2Q9Y426 696 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 PPP2R3BQ9Y5P8 575 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 RASA4BC9J798 803 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 STK25O00506 426 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 NDUFB5O43674 189 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 SCNN1DP51172 638 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 IGBP1P78318 339 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 KIAA0753Q2KHM9 967 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 CREB3L3Q68CJ9 461 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 GALNT17Q6IS24 598 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 PHOSPHO2Q8TCD6 241 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 MAML3Q96JK9 1138 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 AASDHPPTQ9NRN7 309 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 CWC15Q9P013 229 aaKnown RBP5.57□□□□□ -1.52
NPHP3-206ENST00000474871 ALKQ9UM73 1620 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 NRXN3Q9Y4C0 1643 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 GTPBP10A4D1E9 387 aaKnown RBP5.57□□□□□ -1.52
NPHP3-206ENST00000474871 hCG_1984214I3L0E3 225 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 PLA2G4AP47712 749 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 ST5P78524 1137 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 HNRNPUQ00839 825 aaKnown RBP eCLIP5.57□□□□□ -1.52
NPHP3-206ENST00000474871 ZRSR1Q15695 479 aaKnown RBP5.57□□□□□ -1.52
NPHP3-206ENST00000474871 CCDC80Q76M96 950 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 CHPFQ8IZ52 775 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 ZNF713Q8N859 430 aaPredicted RBP5.57□□□□□ -1.52
NPHP3-206ENST00000474871 NEK11Q8NG66 645 aa5.57□□□□□ -1.52
NPHP3-206ENST00000474871 B4GALNT2Q8NHY0 566 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms