RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 SYF2O95926 243 aaKnown RBP16.08■□□□□ 0.16
PTPN9-206ENST00000618819 HAUS8Q9BT25 410 aa16.08■□□□□ 0.16
PTPN9-206ENST00000618819 RPS6KA1Q15418 735 aa16.07■□□□□ 0.16
PTPN9-206ENST00000618819 ATP2A3Q93084 1043 aa16.07■□□□□ 0.16
PTPN9-206ENST00000618819 JPH2Q9BR39 696 aaPredicted RBP16.07■□□□□ 0.16
PTPN9-206ENST00000618819 SLC12A2P55011 1212 aa16.07■□□□□ 0.16
PTPN9-206ENST00000618819 SDCCAG3Q96C92 435 aa16.07■□□□□ 0.16
PTPN9-206ENST00000618819 PEX26Q7Z412 305 aa16.07■□□□□ 0.16
PTPN9-206ENST00000618819 CSGALNACT2Q8N6G5 542 aa16.07■□□□□ 0.16
PTPN9-206ENST00000618819 N4BP2L2Q92802 583 aaPredicted RBP16.07■□□□□ 0.16
PTPN9-206ENST00000618819 KRT12Q99456 494 aa16.07■□□□□ 0.16
PTPN9-206ENST00000618819 PALM2Q8IXS6 379 aa16.07■□□□□ 0.16
PTPN9-206ENST00000618819 GOLGA5Q8TBA6 731 aa16.07■□□□□ 0.16
PTPN9-206ENST00000618819 HSP90AA5PQ58FG0 334 aa16.07■□□□□ 0.16
PTPN9-206ENST00000618819 CPA1P15085 419 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 SMC5Q8IY18 1101 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 CHMP2AO43633 222 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 BRAPQ7Z569 592 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 PIP4K2CQ8TBX8 421 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 POLKQ9UBT6 870 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 RRP15Q9Y3B9 282 aaKnown RBP16.06■□□□□ 0.16
PTPN9-206ENST00000618819 MAGEA1P43355 309 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 GNAQP50148 359 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 LETM2Q2VYF4 491 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 THEGQ9P2T0 379 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 CALML3P27482 149 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 RCN2Q14257 317 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 LRGUKQ96M69 825 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 MEIS3Q99687 375 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 IFT88Q13099 833 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 CREB3L3Q68CJ9 461 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 TYW1BQ6NUM6 668 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 DCLK2Q8N568 766 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 NUB1Q9Y5A7 615 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 FAM83GA6ND36 823 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 SLC9C2Q5TAH2 1124 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 CCDC125Q86Z20 511 aa16.06■□□□□ 0.16
PTPN9-206ENST00000618819 MMEL1Q495T6 779 aa16.05■□□□□ 0.16
PTPN9-206ENST00000618819 CDC5LQ99459 802 aaKnown RBP16.05■□□□□ 0.16
PTPN9-206ENST00000618819 TCP11Q8WWU5 503 aa16.05■□□□□ 0.16
PTPN9-206ENST00000618819 TBC1D7Q9P0N9 293 aa16.05■□□□□ 0.16
PTPN9-206ENST00000618819 ADKP55263 362 aaKnown RBP16.05■□□□□ 0.16
PTPN9-206ENST00000618819 KCTD16Q68DU8 428 aa16.05■□□□□ 0.16
PTPN9-206ENST00000618819 CYB5RLQ6IPT4 315 aa16.05■□□□□ 0.16
PTPN9-206ENST00000618819 RTL9Q8NET4 1388 aa16.05■□□□□ 0.16
PTPN9-206ENST00000618819 MAEAQ7L5Y9 396 aa16.05■□□□□ 0.16
PTPN9-206ENST00000618819 CCDC169A6NNP5 214 aa16.05■□□□□ 0.16
PTPN9-206ENST00000618819 POLR2DO15514 142 aaKnown RBP16.05■□□□□ 0.16
PTPN9-206ENST00000618819 GSTO1P78417 241 aa16.05■□□□□ 0.16
PTPN9-206ENST00000618819 NLRP7Q8WX94 980 aa16.05■□□□□ 0.16
PTPN9-206ENST00000618819 SCYL1Q96KG9 808 aa16.05■□□□□ 0.16
PTPN9-206ENST00000618819 PCDHB15Q9Y5E8 787 aa16.05■□□□□ 0.16
PTPN9-206ENST00000618819 DPH5Q9H2P9 285 aa16.05■□□□□ 0.16
PTPN9-206ENST00000618819 SCHIP1Q9P0W5 487 aaPredicted RBP16.05■□□□□ 0.16
PTPN9-206ENST00000618819 ABCC11Q96J66 1382 aa16.05■□□□□ 0.16
PTPN9-206ENST00000618819 UQCRFS1P1P0C7P4 283 aa16.04■□□□□ 0.16
PTPN9-206ENST00000618819 DCUN1D2Q6PH85 259 aa16.04■□□□□ 0.16
PTPN9-206ENST00000618819 BACH1O14867 736 aa16.04■□□□□ 0.16
PTPN9-206ENST00000618819 GABPB2Q8TAK5 448 aaPredicted RBP16.04■□□□□ 0.16
PTPN9-206ENST00000618819 SLC24A3Q9HC58 644 aa16.04■□□□□ 0.16
PTPN9-206ENST00000618819 MBIPQ9NS73 344 aa16.04■□□□□ 0.16
PTPN9-206ENST00000618819 KRT10P13645 584 aa16.04■□□□□ 0.16
PTPN9-206ENST00000618819 SAT1P21673 171 aa16.04■□□□□ 0.16
PTPN9-206ENST00000618819 PAK1Q13153 545 aa16.04■□□□□ 0.16
PTPN9-206ENST00000618819 PDE11AQ9HCR9 933 aa16.04■□□□□ 0.16
PTPN9-206ENST00000618819 ADAT2Q7Z6V5 191 aaKnown RBP16.04■□□□□ 0.16
PTPN9-206ENST00000618819 TAB3Q8N5C8 712 aaPredicted RBP16.04■□□□□ 0.16
PTPN9-206ENST00000618819 BAG5Q9UL15 447 aa16.04■□□□□ 0.16
PTPN9-206ENST00000618819 PSPC1Q8WXF1 523 aaKnown RBP16.04■□□□□ 0.16
PTPN9-206ENST00000618819 UIMC1Q96RL1 719 aa16.04■□□□□ 0.16
PTPN9-206ENST00000618819 RAB17Q9H0T7 212 aa16.04■□□□□ 0.16
PTPN9-206ENST00000618819 EMILIN1Q9Y6C2 1016 aa16.04■□□□□ 0.16
PTPN9-206ENST00000618819 MIGA1Q8NAN2 632 aa16.04■□□□□ 0.16
PTPN9-206ENST00000618819 DTNBO60941 627 aa16.03■□□□□ 0.16
PTPN9-206ENST00000618819 CDR2Q01850 454 aa16.03■□□□□ 0.16
PTPN9-206ENST00000618819 TMTC1Q8IUR5 882 aa16.03■□□□□ 0.16
PTPN9-206ENST00000618819 SLC4A7Q9Y6M7 1214 aa16.03■□□□□ 0.16
PTPN9-206ENST00000618819 ESYT2A0FGR8 921 aa16.03■□□□□ 0.16
PTPN9-206ENST00000618819 EEF1DP29692 281 aaKnown RBP16.03■□□□□ 0.16
PTPN9-206ENST00000618819 HP1BP3Q5SSJ5 553 aaPredicted RBP16.03■□□□□ 0.16
PTPN9-206ENST00000618819 SCINQ9Y6U3 715 aa16.03■□□□□ 0.16
PTPN9-206ENST00000618819 GSTA1P08263 222 aa16.03■□□□□ 0.16
PTPN9-206ENST00000618819 GSTA2P09210 222 aa16.03■□□□□ 0.16
PTPN9-206ENST00000618819 ARHGAP6O43182 974 aa16.03■□□□□ 0.16
PTPN9-206ENST00000618819 BRD3Q15059 726 aa16.03■□□□□ 0.16
PTPN9-206ENST00000618819 TMTC4Q5T4D3 741 aa16.03■□□□□ 0.16
PTPN9-206ENST00000618819 CNNM4Q6P4Q7 775 aa16.03■□□□□ 0.16
PTPN9-206ENST00000618819 SAR1BQ9Y6B6 198 aa16.03■□□□□ 0.16
PTPN9-206ENST00000618819 BZW2Q9Y6E2 419 aaKnown RBP16.03■□□□□ 0.16
PTPN9-206ENST00000618819 CALUO43852 315 aaPredicted RBP16.03■□□□□ 0.16
PTPN9-206ENST00000618819 IMPACTQ9P2X3 320 aa16.03■□□□□ 0.16
PTPN9-206ENST00000618819 KCNH3Q9ULD8 1083 aa16.03■□□□□ 0.16
PTPN9-206ENST00000618819 MAGEB6P1A0A0J9YX57 407 aa16.03■□□□□ 0.16
PTPN9-206ENST00000618819 PALM3A6NDB9 673 aaPredicted RBP16.03■□□□□ 0.16
PTPN9-206ENST00000618819 P3H4Q92791 437 aa16.03■□□□□ 0.16
PTPN9-206ENST00000618819 PDS5BQ9NTI5 1447 aa16.03■□□□□ 0.16
PTPN9-206ENST00000618819 KLHL30Q0D2K2 578 aa16.02■□□□□ 0.16
PTPN9-206ENST00000618819 TRMT44Q8IYL2 757 aaKnown RBP16.02■□□□□ 0.16
PTPN9-206ENST00000618819 SCYL3Q8IZE3 742 aa16.02■□□□□ 0.16
PTPN9-206ENST00000618819 DESI2Q9BSY9 194 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms