RNA–Protein interactions for RNA: ENST00000571562.1

NPLOC4-205, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-205ENST00000571562 TRANK1O15050 2925 aa-0.62□□□□□ -2.51
NPLOC4-205ENST00000571562 MT1GP13640 62 aa-0.62□□□□□ -2.51
NPLOC4-205ENST00000571562 FAM223AQ8IWN6 122 aa-0.62□□□□□ -2.51
NPLOC4-205ENST00000571562 LINC00846Q9NV44 126 aa-0.62□□□□□ -2.51
NPLOC4-205ENST00000571562 TSC2P49815 1807 aa-0.62□□□□□ -2.51
NPLOC4-205ENST00000571562 ATMQ13315 3056 aa-0.62□□□□□ -2.51
NPLOC4-205ENST00000571562 KNL1Q8NG31 2342 aa-0.63□□□□□ -2.51
NPLOC4-205ENST00000571562 FAM24AA6NFZ4 105 aa-0.63□□□□□ -2.51
NPLOC4-205ENST00000571562 H3BNG1 76 aa-0.63□□□□□ -2.51
NPLOC4-205ENST00000571562 DLEU1O43261 78 aa-0.63□□□□□ -2.51
NPLOC4-205ENST00000571562 DNAJC13O75165 2243 aa-0.63□□□□□ -2.51
NPLOC4-205ENST00000571562 SPEGQ15772 3267 aa-0.63□□□□□ -2.51
NPLOC4-205ENST00000571562 CDC42BPGQ6DT37 1551 aa-0.63□□□□□ -2.51
NPLOC4-205ENST00000571562 CEP290O15078 2479 aa-0.63□□□□□ -2.51
NPLOC4-205ENST00000571562 SMG6Q86US8 1419 aaKnown RBP-0.64□□□□□ -2.51
NPLOC4-205ENST00000571562 TCHHQ07283 1943 aa-0.64□□□□□ -2.51
NPLOC4-205ENST00000571562 SPTAN1Q13813 2472 aaKnown RBP-0.64□□□□□ -2.51
NPLOC4-205ENST00000571562 QRICH2Q9H0J4 1663 aa-0.64□□□□□ -2.51
NPLOC4-205ENST00000571562 ARHGEF5Q12774 1597 aa-0.64□□□□□ -2.51
NPLOC4-205ENST00000571562 WDR7Q9Y4E6 1490 aa-0.64□□□□□ -2.51
NPLOC4-205ENST00000571562 H0YGG7 62 aa-0.64□□□□□ -2.51
NPLOC4-205ENST00000571562 FXYD6Q9H0Q3 95 aa-0.64□□□□□ -2.51
NPLOC4-205ENST00000571562 MANBALQ9NQG1 85 aa-0.64□□□□□ -2.51
NPLOC4-205ENST00000571562 IER3IP1Q9Y5U9 82 aa-0.64□□□□□ -2.51
NPLOC4-205ENST00000571562 RANBP2P49792 3224 aaKnown RBP-0.64□□□□□ -2.51
NPLOC4-205ENST00000571562 COL4A6Q14031 1691 aa-0.65□□□□□ -2.51
NPLOC4-205ENST00000571562 LRBAP50851 2863 aa-0.65□□□□□ -2.51
NPLOC4-205ENST00000571562 WHAMMP3Q1A5X7 153 aa-0.65□□□□□ -2.51
NPLOC4-205ENST00000571562 KRTAP8-1Q8IUC2 63 aa-0.65□□□□□ -2.51
NPLOC4-205ENST00000571562 FDCSPQ8NFU4 85 aa-0.65□□□□□ -2.51
NPLOC4-205ENST00000571562 FAM167A-AS1Q96KT0 104 aa-0.65□□□□□ -2.51
NPLOC4-205ENST00000571562 RAPGEF6Q8TEU7 1601 aa-0.65□□□□□ -2.51
NPLOC4-205ENST00000571562 SLIT1O75093 1534 aa-0.65□□□□□ -2.51
NPLOC4-205ENST00000571562 TROQ12816 1431 aaPredicted RBP-0.65□□□□□ -2.51
NPLOC4-205ENST00000571562 WDFY4Q6ZS81 3184 aa-0.65□□□□□ -2.51
NPLOC4-205ENST00000571562 ADAMTS12P58397 1594 aa-0.66□□□□□ -2.51
NPLOC4-205ENST00000571562 LINC00959A0A1B0GUT2 108 aa-0.66□□□□□ -2.52
NPLOC4-205ENST00000571562 EFCAB10A6NFE3 127 aa-0.66□□□□□ -2.52
NPLOC4-205ENST00000571562 SPINK4O60575 86 aa-0.66□□□□□ -2.52
NPLOC4-205ENST00000571562 SMR3BP02814 79 aaPredicted RBP-0.66□□□□□ -2.52
NPLOC4-205ENST00000571562 MT1EP04732 61 aa-0.66□□□□□ -2.52
NPLOC4-205ENST00000571562 Q0VG73 95 aa-0.66□□□□□ -2.52
NPLOC4-205ENST00000571562 MT1LQ93083 61 aa-0.66□□□□□ -2.52
NPLOC4-205ENST00000571562 CENPEQ02224 2701 aa-0.66□□□□□ -2.52
NPLOC4-205ENST00000571562 DMDP11532 3685 aa-0.67□□□□□ -2.52
NPLOC4-205ENST00000571562 KDM5AP29375 1690 aaKnown RBP-0.67□□□□□ -2.52
NPLOC4-205ENST00000571562 C9orf92A6NGG3 77 aa-0.67□□□□□ -2.52
NPLOC4-205ENST00000571562 KRTAP19-5Q3LI72 72 aa-0.67□□□□□ -2.52
NPLOC4-205ENST00000571562 LCN9Q8WX39 176 aa-0.67□□□□□ -2.52
NPLOC4-205ENST00000571562 LINC01600Q96MT4 127 aa-0.67□□□□□ -2.52
NPLOC4-205ENST00000571562 PTPN23Q9H3S7 1636 aa-0.67□□□□□ -2.52
NPLOC4-205ENST00000571562 HMGXB3Q12766 1538 aa-0.68□□□□□ -2.52
NPLOC4-205ENST00000571562 ARHGEF12Q9NZN5 1544 aa-0.68□□□□□ -2.52
NPLOC4-205ENST00000571562 CEP350Q5VT06 3117 aa-0.68□□□□□ -2.52
NPLOC4-205ENST00000571562 MYOM1P52179 1685 aa-0.68□□□□□ -2.52
NPLOC4-205ENST00000571562 TRBV7-4A0A0J9YYF1 115 aa-0.68□□□□□ -2.52
NPLOC4-205ENST00000571562 F6UZH7 168 aa-0.68□□□□□ -2.52
NPLOC4-205ENST00000571562 CORTO00230 105 aa-0.68□□□□□ -2.52
NPLOC4-205ENST00000571562 ATP5EP56381 51 aaPredicted RBP-0.68□□□□□ -2.52
NPLOC4-205ENST00000571562 DEFB110Q30KQ9 67 aa-0.68□□□□□ -2.52
NPLOC4-205ENST00000571562 SVBPQ8N300 66 aa-0.68□□□□□ -2.52
NPLOC4-205ENST00000571562 SPTBN5Q9NRC6 3674 aaKnown RBP-0.68□□□□□ -2.52
NPLOC4-205ENST00000571562 S4R3F8 94 aa-0.68□□□□□ -2.52
NPLOC4-205ENST00000571562 BCORQ6W2J9 1755 aa-0.68□□□□□ -2.52
NPLOC4-205ENST00000571562 VPS13CQ709C8 3753 aa-0.69□□□□□ -2.52
NPLOC4-205ENST00000571562 CRYBG3Q68DQ2 2970 aa-0.69□□□□□ -2.52
NPLOC4-205ENST00000571562 FMN2Q9NZ56 1722 aa-0.69□□□□□ -2.52
NPLOC4-205ENST00000571562 MT1FP04733 61 aa-0.69□□□□□ -2.52
NPLOC4-205ENST00000571562 EP400Q96L91 3159 aa-0.69□□□□□ -2.52
NPLOC4-205ENST00000571562 MGAQ8IWI9 3026 aa-0.7□□□□□ -2.52
NPLOC4-205ENST00000571562 PAPPA2Q9BXP8 1791 aa-0.7□□□□□ -2.52
NPLOC4-205ENST00000571562 SCAPERQ9BY12 1400 aa-0.7□□□□□ -2.52
NPLOC4-205ENST00000571562 TRAPPC2P0DI81 140 aa-0.7□□□□□ -2.52
NPLOC4-205ENST00000571562 TRAPPC2BP0DI82 140 aa-0.7□□□□□ -2.52
NPLOC4-205ENST00000571562 S100A1P23297 94 aa-0.7□□□□□ -2.52
NPLOC4-205ENST00000571562 ASIPP42127 132 aa-0.7□□□□□ -2.52
NPLOC4-205ENST00000571562 UBE2D3P61077 147 aa-0.7□□□□□ -2.52
NPLOC4-205ENST00000571562 UBE2D2P62837 147 aa-0.7□□□□□ -2.52
NPLOC4-205ENST00000571562 PPP3R1P63098 170 aa-0.7□□□□□ -2.52
NPLOC4-205ENST00000571562 GAPVD1Q14C86 1478 aa-0.7□□□□□ -2.52
NPLOC4-205ENST00000571562 MKI67P46013 3256 aaKnown RBP-0.7□□□□□ -2.52
NPLOC4-205ENST00000571562 TET3O43151 1660 aa-0.71□□□□□ -2.52
NPLOC4-205ENST00000571562 FYCO1Q9BQS8 1478 aa-0.71□□□□□ -2.52
NPLOC4-205ENST00000571562 GNG4P50150 75 aa-0.71□□□□□ -2.52
NPLOC4-205ENST00000571562 H1FX-AS1Q4G0G2 97 aa-0.71□□□□□ -2.52
NPLOC4-205ENST00000571562 CLPSL2Q6UWE3 100 aa-0.71□□□□□ -2.52
NPLOC4-205ENST00000571562 C9orf62Q8N4C0 152 aa-0.71□□□□□ -2.52
NPLOC4-205ENST00000571562 DEFB105AQ8NG35 78 aa-0.71□□□□□ -2.52
NPLOC4-205ENST00000571562 MAP3K1Q13233 1512 aa-0.71□□□□□ -2.52
NPLOC4-205ENST00000571562 LOC400499M0QZD8 3231 aa-0.71□□□□□ -2.52
NPLOC4-205ENST00000571562 DCHS1Q96JQ0 3298 aa-0.71□□□□□ -2.52
NPLOC4-205ENST00000571562 CDC42BPAQ5VT25 1732 aa-0.72□□□□□ -2.52
NPLOC4-205ENST00000571562 MYOM2P54296 1465 aa-0.72□□□□□ -2.52
NPLOC4-205ENST00000571562 A0A1B0GWA3 101 aa-0.72□□□□□ -2.52
NPLOC4-205ENST00000571562 FAM223BA6NKX1 122 aa-0.72□□□□□ -2.52
NPLOC4-205ENST00000571562 DEFB4AO15263 64 aa-0.72□□□□□ -2.52
NPLOC4-205ENST00000571562 RPS29P62273 56 aaKnown RBP-0.72□□□□□ -2.52
NPLOC4-205ENST00000571562 PRO1854Q9UHT4 67 aa-0.72□□□□□ -2.52
NPLOC4-205ENST00000571562 SHROOM2Q13796 1616 aa-0.72□□□□□ -2.52
NPLOC4-205ENST00000571562 TULP4Q9NRJ4 1543 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms