RNA–Protein interactions for RNA: ENST00000571562.1

NPLOC4-205, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-205ENST00000571562 PP6455Q8WZ26 134 aa-0.52□□□□□ -2.49
NPLOC4-205ENST00000571562 SRCAPQ6ZRS2 3230 aa-0.53□□□□□ -2.49
NPLOC4-205ENST00000571562 ROCK2O75116 1388 aaKnown RBP-0.53□□□□□ -2.49
NPLOC4-205ENST00000571562 DNAH9Q9NYC9 4486 aa-0.53□□□□□ -2.49
NPLOC4-205ENST00000571562 MYOZ3Q8TDC0 251 aa-0.53□□□□□ -2.49
NPLOC4-205ENST00000571562 C1orf54Q8WWF1 131 aa-0.53□□□□□ -2.49
NPLOC4-205ENST00000571562 NBEAQ8NFP9 2946 aa-0.53□□□□□ -2.49
NPLOC4-205ENST00000571562 URB1O60287 2271 aaKnown RBP-0.53□□□□□ -2.49
NPLOC4-205ENST00000571562 KIF21AQ7Z4S6 1674 aa-0.53□□□□□ -2.49
NPLOC4-205ENST00000571562 IQSEC2Q5JU85 1478 aa-0.54□□□□□ -2.5
NPLOC4-205ENST00000571562 SPTA1P02549 2419 aa-0.54□□□□□ -2.5
NPLOC4-205ENST00000571562 LOC285095A0A1B0GVY8 99 aa-0.54□□□□□ -2.5
NPLOC4-205ENST00000571562 K7EQZ3 153 aa-0.54□□□□□ -2.5
NPLOC4-205ENST00000571562 SPRR1BP22528 89 aa-0.54□□□□□ -2.5
NPLOC4-205ENST00000571562 CHD7Q9P2D1 2997 aa-0.54□□□□□ -2.5
NPLOC4-205ENST00000571562 MYO15AQ9UKN7 3530 aa-0.54□□□□□ -2.5
NPLOC4-205ENST00000571562 A0A0C4DFX4 3053 aa-0.54□□□□□ -2.5
NPLOC4-205ENST00000571562 COL14A1Q05707 1796 aaKnown RBP-0.55□□□□□ -2.5
NPLOC4-205ENST00000571562 RELNP78509 3460 aa-0.55□□□□□ -2.5
NPLOC4-205ENST00000571562 TRIOO75962 3097 aa-0.55□□□□□ -2.5
NPLOC4-205ENST00000571562 BOD1L1Q8NFC6 3051 aa-0.55□□□□□ -2.5
NPLOC4-205ENST00000571562 CFAP46Q8IYW2 2715 aa-0.55□□□□□ -2.5
NPLOC4-205ENST00000571562 DMXL2Q8TDJ6 3036 aa-0.55□□□□□ -2.5
NPLOC4-205ENST00000571562 SPENQ96T58 3664 aaKnown RBP-0.55□□□□□ -2.5
NPLOC4-205ENST00000571562 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.55□□□□□ -2.5
NPLOC4-205ENST00000571562 ACACAQ13085 2346 aa-0.55□□□□□ -2.5
NPLOC4-205ENST00000571562 MT1HP80294 61 aa-0.55□□□□□ -2.5
NPLOC4-205ENST00000571562 ADGRG4Q8IZF6 3080 aa-0.56□□□□□ -2.5
NPLOC4-205ENST00000571562 ZZEF1O43149 2961 aa-0.56□□□□□ -2.5
NPLOC4-205ENST00000571562 SMG1Q96Q15 3661 aaKnown RBP-0.56□□□□□ -2.5
NPLOC4-205ENST00000571562 M0R2T5 61 aa-0.56□□□□□ -2.5
NPLOC4-205ENST00000571562 IGLC1P0CG04 106 aa-0.56□□□□□ -2.5
NPLOC4-205ENST00000571562 C9orf153Q5TBE3 101 aa-0.56□□□□□ -2.5
NPLOC4-205ENST00000571562 DPH3P1Q9H4G8 78 aa-0.56□□□□□ -2.5
NPLOC4-205ENST00000571562 MYO9AB2RTY4 2548 aa-0.56□□□□□ -2.5
NPLOC4-205ENST00000571562 TLN1Q9Y490 2541 aaKnown RBP-0.56□□□□□ -2.5
NPLOC4-205ENST00000571562 DMXL1Q9Y485 3027 aa-0.56□□□□□ -2.5
NPLOC4-205ENST00000571562 BCL9LQ86UU0 1499 aa-0.56□□□□□ -2.5
NPLOC4-205ENST00000571562 RIMS1Q86UR5 1692 aaKnown RBP-0.56□□□□□ -2.5
NPLOC4-205ENST00000571562 CSMD1Q96PZ7 3565 aa-0.56□□□□□ -2.5
NPLOC4-205ENST00000571562 FRYQ5TBA9 3013 aa-0.57□□□□□ -2.5
NPLOC4-205ENST00000571562 NBASA2RRP1 2371 aa-0.57□□□□□ -2.5
NPLOC4-205ENST00000571562 DNAH10Q8IVF4 4471 aa-0.57□□□□□ -2.5
NPLOC4-205ENST00000571562 SNAPC5O75971 98 aa-0.57□□□□□ -2.5
NPLOC4-205ENST00000571562 MT1AP04731 61 aa-0.57□□□□□ -2.5
NPLOC4-205ENST00000571562 MT1BP07438 61 aa-0.57□□□□□ -2.5
NPLOC4-205ENST00000571562 DEFB112Q30KQ8 113 aa-0.57□□□□□ -2.5
NPLOC4-205ENST00000571562 RPL13AP3Q6NVV1 102 aa-0.57□□□□□ -2.5
NPLOC4-205ENST00000571562 NXT2Q9NPJ8 142 aaKnown RBP-0.57□□□□□ -2.5
NPLOC4-205ENST00000571562 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.57□□□□□ -2.5
NPLOC4-205ENST00000571562 PAPPAQ13219 1627 aa-0.57□□□□□ -2.5
NPLOC4-205ENST00000571562 SPG11Q96JI7 2443 aa-0.57□□□□□ -2.5
NPLOC4-205ENST00000571562 KALRNO60229 2985 aa-0.57□□□□□ -2.5
NPLOC4-205ENST00000571562 UTP20O75691 2785 aaKnown RBP-0.57□□□□□ -2.5
NPLOC4-205ENST00000571562 FAM186AA6NE01 2351 aa-0.57□□□□□ -2.5
NPLOC4-205ENST00000571562 ZFHX3Q15911 3703 aa-0.58□□□□□ -2.5
NPLOC4-205ENST00000571562 TLN2Q9Y4G6 2542 aa-0.58□□□□□ -2.5
NPLOC4-205ENST00000571562 DNAH8Q96JB1 4490 aa-0.58□□□□□ -2.5
NPLOC4-205ENST00000571562 H0YAA0 97 aa-0.58□□□□□ -2.5
NPLOC4-205ENST00000571562 MT1XP80297 61 aa-0.58□□□□□ -2.5
NPLOC4-205ENST00000571562 SPRR4Q96PI1 79 aa-0.58□□□□□ -2.5
NPLOC4-205ENST00000571562 CDC42SE2Q9NRR3 84 aa-0.58□□□□□ -2.5
NPLOC4-205ENST00000571562 ACACBO00763 2458 aa-0.58□□□□□ -2.5
NPLOC4-205ENST00000571562 KNDC1Q76NI1 1749 aa-0.58□□□□□ -2.5
NPLOC4-205ENST00000571562 TRRAPQ9Y4A5 3859 aa-0.59□□□□□ -2.5
NPLOC4-205ENST00000571562 ROBO1Q9Y6N7 1651 aa-0.59□□□□□ -2.5
NPLOC4-205ENST00000571562 BTAF1O14981 1849 aa-0.59□□□□□ -2.5
NPLOC4-205ENST00000571562 SHANK2Q9UPX8 1470 aa-0.59□□□□□ -2.5
NPLOC4-205ENST00000571562 A0A1B0GV90 55 aa-0.59□□□□□ -2.5
NPLOC4-205ENST00000571562 K7EP34 96 aa-0.59□□□□□ -2.5
NPLOC4-205ENST00000571562 MGPP08493 103 aa-0.59□□□□□ -2.5
NPLOC4-205ENST00000571562 COX6B1P14854 86 aa-0.59□□□□□ -2.5
NPLOC4-205ENST00000571562 DEFB1P60022 68 aa-0.59□□□□□ -2.5
NPLOC4-205ENST00000571562 TMEM263Q8WUH6 116 aaKnown RBP-0.59□□□□□ -2.5
NPLOC4-205ENST00000571562 ARL2-SNX15V9GYD0 113 aa-0.59□□□□□ -2.5
NPLOC4-205ENST00000571562 NSD3Q9BZ95 1437 aa-0.59□□□□□ -2.5
NPLOC4-205ENST00000571562 REV3LO60673 3130 aa-0.59□□□□□ -2.5
NPLOC4-205ENST00000571562 PDE4DIPQ5VU43 2346 aa-0.59□□□□□ -2.5
NPLOC4-205ENST00000571562 PRUNE2Q8WUY3 3088 aa-0.59□□□□□ -2.5
NPLOC4-205ENST00000571562 KTN1Q86UP2 1357 aaKnown RBP-0.59□□□□□ -2.5
NPLOC4-205ENST00000571562 BPTFQ12830 3046 aa-0.6□□□□□ -2.51
NPLOC4-205ENST00000571562 UBE2L5PA0A1B0GUS4 154 aa-0.6□□□□□ -2.51
NPLOC4-205ENST00000571562 GNG11P61952 73 aa-0.6□□□□□ -2.51
NPLOC4-205ENST00000571562 UBA52P62987 128 aaKnown RBP-0.6□□□□□ -2.51
NPLOC4-205ENST00000571562 UBE2L3P68036 154 aaKnown RBP-0.6□□□□□ -2.51
NPLOC4-205ENST00000571562 C10orf113Q5VZT2 155 aa-0.6□□□□□ -2.51
NPLOC4-205ENST00000571562 FAIMQ9NVQ4 179 aa-0.6□□□□□ -2.51
NPLOC4-205ENST00000571562 CSMD2Q7Z408 3487 aa-0.6□□□□□ -2.51
NPLOC4-205ENST00000571562 C5orf42Q9H799 3197 aa-0.6□□□□□ -2.51
NPLOC4-205ENST00000571562 MT2AP02795 61 aa-0.61□□□□□ -2.51
NPLOC4-205ENST00000571562 DEFB135Q30KP9 77 aa-0.61□□□□□ -2.51
NPLOC4-205ENST00000571562 SFTA2Q6UW10 78 aa-0.61□□□□□ -2.51
NPLOC4-205ENST00000571562 MT1MQ8N339 61 aa-0.61□□□□□ -2.51
NPLOC4-205ENST00000571562 DEFB123Q8N688 67 aa-0.61□□□□□ -2.51
NPLOC4-205ENST00000571562 UQCR10Q9UDW1 63 aa-0.61□□□□□ -2.51
NPLOC4-205ENST00000571562 A2ML1A8K2U0 1454 aa-0.61□□□□□ -2.51
NPLOC4-205ENST00000571562 POLA1P09884 1462 aaPredicted RBP-0.61□□□□□ -2.51
NPLOC4-205ENST00000571562 ZFHX4Q86UP3 3567 aa-0.62□□□□□ -2.51
NPLOC4-205ENST00000571562 ANKRD50Q9ULJ7 1429 aa-0.62□□□□□ -2.51
NPLOC4-205ENST00000571562 FREM2Q5SZK8 3169 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms