RNA–Protein interactions for RNA: ENST00000571562.1

NPLOC4-205, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-205ENST00000571562 LAMA3Q16787 3333 aa-0.41□□□□□ -2.48
NPLOC4-205ENST00000571562 TRBV7-3A0A075B6L6 115 aa-0.42□□□□□ -2.48
NPLOC4-205ENST00000571562 NBPF19A0A087WUL8 3843 aa-0.42□□□□□ -2.48
NPLOC4-205ENST00000571562 MIF4GDA9UHW6 222 aaKnown RBP-0.42□□□□□ -2.48
NPLOC4-205ENST00000571562 KLK9Q2XQG4 91 aa-0.42□□□□□ -2.48
NPLOC4-205ENST00000571562 Q6JHZ5 121 aa-0.42□□□□□ -2.48
NPLOC4-205ENST00000571562 SPANXDQ9BXN6 97 aa-0.42□□□□□ -2.48
NPLOC4-205ENST00000571562 ERCC6L2Q5T890 1561 aa-0.42□□□□□ -2.48
NPLOC4-205ENST00000571562 DNAH1Q9P2D7 4330 aa-0.42□□□□□ -2.48
NPLOC4-205ENST00000571562 MAP1BP46821 2468 aaKnown RBP-0.42□□□□□ -2.48
NPLOC4-205ENST00000571562 CCDC168Q8NDH2 2452 aa-0.42□□□□□ -2.48
NPLOC4-205ENST00000571562 LRP6O75581 1613 aa-0.42□□□□□ -2.48
NPLOC4-205ENST00000571562 FOCADQ5VW36 1801 aa-0.43□□□□□ -2.48
NPLOC4-205ENST00000571562 RIF1Q5UIP0 2472 aaKnown RBP-0.43□□□□□ -2.48
NPLOC4-205ENST00000571562 IGLC7A0M8Q6 106 aa-0.43□□□□□ -2.48
NPLOC4-205ENST00000571562 BTG2P78543 158 aa-0.43□□□□□ -2.48
NPLOC4-205ENST00000571562 CATR1Q13166 79 aa-0.43□□□□□ -2.48
NPLOC4-205ENST00000571562 KRTAP20-1Q3LI63 56 aa-0.43□□□□□ -2.48
NPLOC4-205ENST00000571562 MGST2Q99735 147 aa-0.43□□□□□ -2.48
NPLOC4-205ENST00000571562 DYNC1H1Q14204 4646 aaKnown RBP-0.43□□□□□ -2.48
NPLOC4-205ENST00000571562 AKAP13Q12802 2813 aa-0.43□□□□□ -2.48
NPLOC4-205ENST00000571562 ANK3Q12955 4377 aaKnown RBP-0.43□□□□□ -2.48
NPLOC4-205ENST00000571562 GVINP1Q7Z2Y8 2422 aa-0.44□□□□□ -2.48
NPLOC4-205ENST00000571562 APOBP04114 4563 aaKnown RBP-0.44□□□□□ -2.48
NPLOC4-205ENST00000571562 FXYD6-FXYD2A0A087WZ82 144 aa-0.44□□□□□ -2.48
NPLOC4-205ENST00000571562 I3L2K1 104 aa-0.44□□□□□ -2.48
NPLOC4-205ENST00000571562 APOC2P02655 101 aa-0.44□□□□□ -2.48
NPLOC4-205ENST00000571562 PRM1P04553 51 aa-0.44□□□□□ -2.48
NPLOC4-205ENST00000571562 HMGN1P05114 100 aa-0.44□□□□□ -2.48
NPLOC4-205ENST00000571562 SPRR2EP22531 72 aa-0.44□□□□□ -2.48
NPLOC4-205ENST00000571562 DYNLRB1Q9NP97 96 aa-0.44□□□□□ -2.48
NPLOC4-205ENST00000571562 LINC00474Q9P2X8 69 aa-0.44□□□□□ -2.48
NPLOC4-205ENST00000571562 LINC01558Q9Y6Z2 57 aa-0.44□□□□□ -2.48
NPLOC4-205ENST00000571562 PPRC1Q5VV67 1664 aaKnown RBP-0.44□□□□□ -2.48
NPLOC4-205ENST00000571562 HTTP42858 3142 aa-0.44□□□□□ -2.48
NPLOC4-205ENST00000571562 UQCR11O14957 56 aa-0.45□□□□□ -2.48
NPLOC4-205ENST00000571562 TNFP01375 233 aa-0.45□□□□□ -2.48
NPLOC4-205ENST00000571562 SPRR2AP35326 72 aa-0.45□□□□□ -2.48
NPLOC4-205ENST00000571562 PKD1P98161 4303 aa-0.45□□□□□ -2.48
NPLOC4-205ENST00000571562 C10orf71Q711Q0 1435 aa-0.46□□□□□ -2.48
NPLOC4-205ENST00000571562 SVEP1Q4LDE5 3571 aa-0.46□□□□□ -2.48
NPLOC4-205ENST00000571562 ATRQ13535 2644 aa-0.46□□□□□ -2.48
NPLOC4-205ENST00000571562 CMYA5Q8N3K9 4069 aa-0.46□□□□□ -2.48
NPLOC4-205ENST00000571562 PRKDCP78527 4128 aaKnown RBP-0.46□□□□□ -2.48
NPLOC4-205ENST00000571562 MGAM2Q2M2H8 2515 aa-0.46□□□□□ -2.48
NPLOC4-205ENST00000571562 HMGN4O00479 90 aa-0.46□□□□□ -2.48
NPLOC4-205ENST00000571562 DCDP81605 110 aaKnown RBP-0.46□□□□□ -2.48
NPLOC4-205ENST00000571562 COX17Q14061 63 aa-0.46□□□□□ -2.48
NPLOC4-205ENST00000571562 WNK1Q9H4A3 2382 aa-0.46□□□□□ -2.48
NPLOC4-205ENST00000571562 PHLPP1O60346 1717 aa-0.47□□□□□ -2.48
NPLOC4-205ENST00000571562 PRRC2CQ9Y520 2896 aaKnown RBP-0.47□□□□□ -2.48
NPLOC4-205ENST00000571562 PCNX1Q96RV3 2341 aa-0.47□□□□□ -2.48
NPLOC4-205ENST00000571562 PSME4Q14997 1843 aa-0.47□□□□□ -2.48
NPLOC4-205ENST00000571562 SACSQ9NZJ4 4579 aa-0.47□□□□□ -2.48
NPLOC4-205ENST00000571562 LAMA1P25391 3075 aa-0.47□□□□□ -2.48
NPLOC4-205ENST00000571562 FGF7P21781 194 aa-0.47□□□□□ -2.48
NPLOC4-205ENST00000571562 ITPR1Q14643 2758 aa-0.47□□□□□ -2.49
NPLOC4-205ENST00000571562 EYSQ5T1H1 3165 aa-0.47□□□□□ -2.49
NPLOC4-205ENST00000571562 MTORP42345 2549 aa-0.47□□□□□ -2.49
NPLOC4-205ENST00000571562 MBD5Q9P267 1494 aa-0.48□□□□□ -2.49
NPLOC4-205ENST00000571562 ANKRD11Q6UB99 2663 aaPredicted RBP-0.48□□□□□ -2.49
NPLOC4-205ENST00000571562 DNAH5Q8TE73 4624 aa-0.48□□□□□ -2.49
NPLOC4-205ENST00000571562 CUBNO60494 3623 aa-0.48□□□□□ -2.49
NPLOC4-205ENST00000571562 TRBV6-1A0A0K0K1D8 114 aa-0.48□□□□□ -2.49
NPLOC4-205ENST00000571562 OOSP1A8MZH6 123 aa-0.48□□□□□ -2.49
NPLOC4-205ENST00000571562 IFNGP01579 166 aa-0.48□□□□□ -2.49
NPLOC4-205ENST00000571562 AKAIN1P0CW23 69 aa-0.48□□□□□ -2.49
NPLOC4-205ENST00000571562 KRTAP6-2Q3LI66 62 aa-0.48□□□□□ -2.49
NPLOC4-205ENST00000571562 C8orf59Q8N0T1 100 aaPredicted RBP-0.48□□□□□ -2.49
NPLOC4-205ENST00000571562 LYSTQ99698 3801 aa-0.48□□□□□ -2.49
NPLOC4-205ENST00000571562 VPS13BQ7Z7G8 4022 aa-0.48□□□□□ -2.49
NPLOC4-205ENST00000571562 TEX15Q9BXT5 2789 aa-0.48□□□□□ -2.49
NPLOC4-205ENST00000571562 CPSF1Q10570 1443 aaKnown RBP-0.48□□□□□ -2.49
NPLOC4-205ENST00000571562 AKAP9Q99996 3911 aa-0.48□□□□□ -2.49
NPLOC4-205ENST00000571562 APOC3P02656 99 aa-0.49□□□□□ -2.49
NPLOC4-205ENST00000571562 TPPP2P59282 170 aa-0.49□□□□□ -2.49
NPLOC4-205ENST00000571562 DEFA5Q01523 94 aa-0.49□□□□□ -2.49
NPLOC4-205ENST00000571562 C5orf38Q86SI9 138 aa-0.49□□□□□ -2.49
NPLOC4-205ENST00000571562 GCN1Q92616 2671 aaKnown RBP-0.49□□□□□ -2.49
NPLOC4-205ENST00000571562 LRRK2Q5S007 2527 aa-0.49□□□□□ -2.49
NPLOC4-205ENST00000571562 LRRC37A2A6NM11 1700 aa-0.5□□□□□ -2.49
NPLOC4-205ENST00000571562 SSSCA1O60232 199 aa-0.5□□□□□ -2.49
NPLOC4-205ENST00000571562 MRPL54Q6P161 138 aaKnown RBP-0.5□□□□□ -2.49
NPLOC4-205ENST00000571562 COMMD6Q7Z4G1 85 aa-0.5□□□□□ -2.49
NPLOC4-205ENST00000571562 SPRR2FQ96RM1 72 aa-0.5□□□□□ -2.49
NPLOC4-205ENST00000571562 TACC2O95359 2948 aa-0.51□□□□□ -2.49
NPLOC4-205ENST00000571562 CNOT1A5YKK6 2376 aaKnown RBP-0.51□□□□□ -2.49
NPLOC4-205ENST00000571562 SFT2D2O95562 160 aa-0.51□□□□□ -2.49
NPLOC4-205ENST00000571562 NAIPQ13075 1403 aa-0.51□□□□□ -2.49
NPLOC4-205ENST00000571562 KRTAP19-6Q3LI70 58 aa-0.51□□□□□ -2.49
NPLOC4-205ENST00000571562 PIGYQ3MUY2 71 aa-0.51□□□□□ -2.49
NPLOC4-205ENST00000571562 ITPR2Q14571 2701 aa-0.51□□□□□ -2.49
NPLOC4-205ENST00000571562 CEP295Q9C0D2 2601 aa-0.51□□□□□ -2.49
NPLOC4-205ENST00000571562 PKD1L2Q7Z442 2459 aa-0.52□□□□□ -2.49
NPLOC4-205ENST00000571562 SBF2Q86WG5 1849 aa-0.52□□□□□ -2.49
NPLOC4-205ENST00000571562 DNAH11Q96DT5 4516 aa-0.52□□□□□ -2.49
NPLOC4-205ENST00000571562 DNAH17Q9UFH2 4485 aa-0.52□□□□□ -2.49
NPLOC4-205ENST00000571562 LOC730098B7Z3J9 87 aa-0.52□□□□□ -2.49
NPLOC4-205ENST00000571562 CHKB-CPT1BH3BT56 60 aa-0.52□□□□□ -2.49
NPLOC4-205ENST00000571562 MT1HL1P0DM35 61 aa-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms