RNA–Protein interactions for RNA: ENST00000571562.1

NPLOC4-205, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-205ENST00000571562 WFDC2Q14508 124 aa-0.33□□□□□ -2.46
NPLOC4-205ENST00000571562 COPS9Q8WXC6 57 aa-0.33□□□□□ -2.46
NPLOC4-205ENST00000571562 ARL11Q969Q4 196 aa-0.33□□□□□ -2.46
NPLOC4-205ENST00000571562 RERGLQ9H628 205 aa-0.33□□□□□ -2.46
NPLOC4-205ENST00000571562 SERP1Q9Y6X1 66 aa-0.33□□□□□ -2.46
NPLOC4-205ENST00000571562 HECTD4Q9Y4D8 3996 aa-0.33□□□□□ -2.46
NPLOC4-205ENST00000571562 VWFP04275 2813 aa-0.33□□□□□ -2.46
NPLOC4-205ENST00000571562 WNK3Q9BYP7 1800 aa-0.34□□□□□ -2.46
NPLOC4-205ENST00000571562 FAT2Q9NYQ8 4349 aa-0.34□□□□□ -2.46
NPLOC4-205ENST00000571562 MRC1P22897 1456 aa-0.34□□□□□ -2.46
NPLOC4-205ENST00000571562 PIGBOS1A0A0B4J2F0 54 aa-0.34□□□□□ -2.46
NPLOC4-205ENST00000571562 ZNF609O15014 1411 aa-0.34□□□□□ -2.46
NPLOC4-205ENST00000571562 PTPN13Q12923 2485 aa-0.34□□□□□ -2.46
NPLOC4-205ENST00000571562 DEFB109BQ30KR1 87 aa-0.34□□□□□ -2.46
NPLOC4-205ENST00000571562 SMIM4Q8WVI0 70 aa-0.34□□□□□ -2.46
NPLOC4-205ENST00000571562 SNRNP25Q9BV90 132 aaKnown RBP-0.34□□□□□ -2.46
NPLOC4-205ENST00000571562 COL6A3P12111 3177 aa-0.34□□□□□ -2.46
NPLOC4-205ENST00000571562 DSPP15924 2871 aaKnown RBP-0.34□□□□□ -2.46
NPLOC4-205ENST00000571562 GOLGA4Q13439 2230 aaKnown RBP-0.34□□□□□ -2.46
NPLOC4-205ENST00000571562 ALMS1Q8TCU4 4167 aa-0.35□□□□□ -2.46
NPLOC4-205ENST00000571562 CHD6Q8TD26 2715 aa-0.35□□□□□ -2.46
NPLOC4-205ENST00000571562 USP9XQ93008 2570 aaPredicted RBP-0.35□□□□□ -2.46
NPLOC4-205ENST00000571562 ARAP2Q8WZ64 1704 aa-0.35□□□□□ -2.47
NPLOC4-205ENST00000571562 NWD2Q9ULI1 1742 aa-0.35□□□□□ -2.47
NPLOC4-205ENST00000571562 ZNF236Q9UL36 1845 aa-0.35□□□□□ -2.47
NPLOC4-205ENST00000571562 Q8IZM0 81 aa-0.35□□□□□ -2.47
NPLOC4-205ENST00000571562 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.35□□□□□ -2.47
NPLOC4-205ENST00000571562 MYO7BQ6PIF6 2116 aa-0.35□□□□□ -2.47
NPLOC4-205ENST00000571562 HECTD1Q9ULT8 2610 aa-0.35□□□□□ -2.47
NPLOC4-205ENST00000571562 APC2O95996 2303 aa-0.36□□□□□ -2.47
NPLOC4-205ENST00000571562 USP9YO00507 2555 aaPredicted RBP-0.36□□□□□ -2.47
NPLOC4-205ENST00000571562 MYO18BQ8IUG5 2567 aa-0.36□□□□□ -2.47
NPLOC4-205ENST00000571562 FLGP20930 4061 aaPredicted RBP-0.36□□□□□ -2.47
NPLOC4-205ENST00000571562 NBEAL1Q6ZS30 2694 aa-0.36□□□□□ -2.47
NPLOC4-205ENST00000571562 TGP01266 2768 aa-0.36□□□□□ -2.47
NPLOC4-205ENST00000571562 Q6AWC8 147 aa-0.36□□□□□ -2.47
NPLOC4-205ENST00000571562 FAM107BQ9H098 131 aa-0.36□□□□□ -2.47
NPLOC4-205ENST00000571562 LENEPQ9Y5L5 61 aa-0.36□□□□□ -2.47
NPLOC4-205ENST00000571562 SPCS1Q9Y6A9 102 aa-0.36□□□□□ -2.47
NPLOC4-205ENST00000571562 V9GYH0 126 aa-0.36□□□□□ -2.47
NPLOC4-205ENST00000571562 ITPR3Q14573 2671 aa-0.36□□□□□ -2.47
NPLOC4-205ENST00000571562 PKHD1P08F94 4074 aa-0.36□□□□□ -2.47
NPLOC4-205ENST00000571562 PATJQ8NI35 1801 aa-0.36□□□□□ -2.47
NPLOC4-205ENST00000571562 BICRAQ9NZM4 1560 aa-0.36□□□□□ -2.47
NPLOC4-205ENST00000571562 PLECQ15149 4684 aaKnown RBP-0.37□□□□□ -2.47
NPLOC4-205ENST00000571562 TNRC18O15417 2968 aaPredicted RBP-0.37□□□□□ -2.47
NPLOC4-205ENST00000571562 BIVM-ERCC5R4GMW8 1640 aa-0.37□□□□□ -2.47
NPLOC4-205ENST00000571562 DNAH6Q9C0G6 4158 aa-0.37□□□□□ -2.47
NPLOC4-205ENST00000571562 PRDM2Q13029 1718 aa-0.37□□□□□ -2.47
NPLOC4-205ENST00000571562 LOC100130705A0A1B0GUX0 176 aa-0.37□□□□□ -2.47
NPLOC4-205ENST00000571562 C12orf73Q69YU5 71 aa-0.37□□□□□ -2.47
NPLOC4-205ENST00000571562 TSLPQ969D9 159 aa-0.37□□□□□ -2.47
NPLOC4-205ENST00000571562 DNAH3Q8TD57 4116 aa-0.37□□□□□ -2.47
NPLOC4-205ENST00000571562 MYOM3Q5VTT5 1437 aa-0.38□□□□□ -2.47
NPLOC4-205ENST00000571562 NHSL1Q5SYE7 1610 aa-0.38□□□□□ -2.47
NPLOC4-205ENST00000571562 MAP1AP78559 2803 aaPredicted RBP-0.38□□□□□ -2.47
NPLOC4-205ENST00000571562 SPRR2DP22532 72 aa-0.38□□□□□ -2.47
NPLOC4-205ENST00000571562 TMEM170BQ5T4T1 132 aa-0.38□□□□□ -2.47
NPLOC4-205ENST00000571562 CFTRP13569 1480 aa-0.38□□□□□ -2.47
NPLOC4-205ENST00000571562 NBEAL2Q6ZNJ1 2754 aa-0.38□□□□□ -2.47
NPLOC4-205ENST00000571562 MUC17Q685J3 4493 aa-0.38□□□□□ -2.47
NPLOC4-205ENST00000571562 PKHD1L1Q86WI1 4243 aa-0.38□□□□□ -2.47
NPLOC4-205ENST00000571562 COL6A5A8TX70 2615 aa-0.38□□□□□ -2.47
NPLOC4-205ENST00000571562 PPIP5K1Q6PFW1 1433 aa-0.38□□□□□ -2.47
NPLOC4-205ENST00000571562 KDM3BQ7LBC6 1761 aa-0.39□□□□□ -2.47
NPLOC4-205ENST00000571562 DCHS2Q6V1P9 2916 aa-0.39□□□□□ -2.47
NPLOC4-205ENST00000571562 NIPBLQ6KC79 2804 aaeCLIP-0.39□□□□□ -2.47
NPLOC4-205ENST00000571562 FASNP49327 2511 aaKnown RBP-0.39□□□□□ -2.47
NPLOC4-205ENST00000571562 PXDNQ92626 1479 aa-0.39□□□□□ -2.47
NPLOC4-205ENST00000571562 DNAH2Q9P225 4427 aa-0.39□□□□□ -2.47
NPLOC4-205ENST00000571562 SPRR1AP35321 89 aa-0.39□□□□□ -2.47
NPLOC4-205ENST00000571562 Q5VSD8 79 aa-0.39□□□□□ -2.47
NPLOC4-205ENST00000571562 NAA60Q9H7X0 242 aa-0.39□□□□□ -2.47
NPLOC4-205ENST00000571562 LINC00472Q9H8W2 130 aa-0.39□□□□□ -2.47
NPLOC4-205ENST00000571562 PIEZO2Q9H5I5 2752 aa-0.39□□□□□ -2.47
NPLOC4-205ENST00000571562 MYH7P12883 1935 aa-0.39□□□□□ -2.47
NPLOC4-205ENST00000571562 CSPG4Q6UVK1 2322 aa-0.39□□□□□ -2.47
NPLOC4-205ENST00000571562 CELSR3Q9NYQ7 3312 aa-0.39□□□□□ -2.47
NPLOC4-205ENST00000571562 CHD8Q9HCK8 2581 aa-0.4□□□□□ -2.47
NPLOC4-205ENST00000571562 MXRA5Q9NR99 2828 aa-0.4□□□□□ -2.47
NPLOC4-205ENST00000571562 S100A12P80511 92 aa-0.4□□□□□ -2.47
NPLOC4-205ENST00000571562 Q56UQ5 140 aa-0.4□□□□□ -2.47
NPLOC4-205ENST00000571562 AMELXQ99217 191 aa-0.4□□□□□ -2.47
NPLOC4-205ENST00000571562 TP53AIP1Q9HCN2 124 aa-0.4□□□□□ -2.47
NPLOC4-205ENST00000571562 COL12A1Q99715 3063 aa-0.4□□□□□ -2.47
NPLOC4-205ENST00000571562 FLNBO75369 2602 aaKnown RBP-0.4□□□□□ -2.47
NPLOC4-205ENST00000571562 WDR87Q6ZQQ6 2873 aa-0.4□□□□□ -2.47
NPLOC4-205ENST00000571562 LAMC1P11047 1609 aa-0.41□□□□□ -2.47
NPLOC4-205ENST00000571562 DNAH7Q8WXX0 4024 aa-0.41□□□□□ -2.47
NPLOC4-205ENST00000571562 F8VRH5 84 aa-0.41□□□□□ -2.48
NPLOC4-205ENST00000571562 K7EP13 123 aa-0.41□□□□□ -2.48
NPLOC4-205ENST00000571562 S100A3P33764 101 aa-0.41□□□□□ -2.48
NPLOC4-205ENST00000571562 SPRR2BP35325 72 aa-0.41□□□□□ -2.48
NPLOC4-205ENST00000571562 BAGE2Q86Y30 109 aa-0.41□□□□□ -2.48
NPLOC4-205ENST00000571562 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.41□□□□□ -2.48
NPLOC4-205ENST00000571562 PPP3R2Q96LZ3 170 aa-0.41□□□□□ -2.48
NPLOC4-205ENST00000571562 TSC22D3Q99576 134 aa-0.41□□□□□ -2.48
NPLOC4-205ENST00000571562 NDUFA4L2Q9NRX3 87 aa-0.41□□□□□ -2.48
NPLOC4-205ENST00000571562 VPS13DQ5THJ4 4388 aa-0.41□□□□□ -2.48
NPLOC4-205ENST00000571562 DOCK2Q92608 1830 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms