RNA–Protein interactions for RNA: ENST00000571562.1

NPLOC4-205, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-205ENST00000571562 SMIM6P0DI80 62 aa-0.22□□□□□ -2.44
NPLOC4-205ENST00000571562 RBM3P98179 157 aaKnown RBP-0.22□□□□□ -2.44
NPLOC4-205ENST00000571562 KRTAP19-7Q3SYF9 63 aa-0.22□□□□□ -2.44
NPLOC4-205ENST00000571562 CFAP126Q5VTH2 177 aa-0.22□□□□□ -2.44
NPLOC4-205ENST00000571562 UNC13AQ9UPW8 1703 aa-0.22□□□□□ -2.44
NPLOC4-205ENST00000571562 PI4KAP42356 2102 aa-0.22□□□□□ -2.44
NPLOC4-205ENST00000571562 KIAA1109Q2LD37 5005 aa-0.22□□□□□ -2.45
NPLOC4-205ENST00000571562 DAPK1P53355 1430 aa-0.22□□□□□ -2.45
NPLOC4-205ENST00000571562 CREBBPQ92793 2442 aa-0.23□□□□□ -2.45
NPLOC4-205ENST00000571562 DOPEY2Q9Y3R5 2298 aa-0.23□□□□□ -2.45
NPLOC4-205ENST00000571562 A0A0D9SFI3 127 aa-0.23□□□□□ -2.45
NPLOC4-205ENST00000571562 SIX6O95475 246 aa-0.23□□□□□ -2.45
NPLOC4-205ENST00000571562 ARPC4P59998 168 aa-0.23□□□□□ -2.45
NPLOC4-205ENST00000571562 NPVFQ9HCQ7 196 aa-0.23□□□□□ -2.45
NPLOC4-205ENST00000571562 CCDC167Q9P0B6 97 aa-0.23□□□□□ -2.45
NPLOC4-205ENST00000571562 SETD2Q9BYW2 2564 aaPredicted RBP-0.23□□□□□ -2.45
NPLOC4-205ENST00000571562 PIN1P1O15428 100 aa-0.24□□□□□ -2.45
NPLOC4-205ENST00000571562 PPP1R17O96001 155 aa-0.24□□□□□ -2.45
NPLOC4-205ENST00000571562 KRTAP20-2Q3LI61 65 aa-0.24□□□□□ -2.45
NPLOC4-205ENST00000571562 PDCD10Q9BUL8 212 aa-0.24□□□□□ -2.45
NPLOC4-205ENST00000571562 SCN3BQ9NY72 215 aa-0.24□□□□□ -2.45
NPLOC4-205ENST00000571562 PRO0255Q9UI72 69 aa-0.24□□□□□ -2.45
NPLOC4-205ENST00000571562 RNF213Q63HN8 5207 aa-0.24□□□□□ -2.45
NPLOC4-205ENST00000571562 FLNCQ14315 2725 aa-0.24□□□□□ -2.45
NPLOC4-205ENST00000571562 RYR2Q92736 4967 aa-0.24□□□□□ -2.45
NPLOC4-205ENST00000571562 SRRM2Q9UQ35 2752 aaKnown RBP-0.24□□□□□ -2.45
NPLOC4-205ENST00000571562 PDZD2O15018 2839 aa-0.24□□□□□ -2.45
NPLOC4-205ENST00000571562 NCOR1O75376 2440 aa-0.25□□□□□ -2.45
NPLOC4-205ENST00000571562 TEP1Q99973 2627 aaKnown RBP-0.25□□□□□ -2.45
NPLOC4-205ENST00000571562 CNFNQ9BYD5 112 aa-0.25□□□□□ -2.45
NPLOC4-205ENST00000571562 AGPAT4-IT1Q9H0P7 198 aa-0.25□□□□□ -2.45
NPLOC4-205ENST00000571562 CASKIN1Q8WXD9 1431 aa-0.25□□□□□ -2.45
NPLOC4-205ENST00000571562 ZNF518AQ6AHZ1 1483 aa-0.25□□□□□ -2.45
NPLOC4-205ENST00000571562 SETXQ7Z333 2677 aaKnown RBP-0.26□□□□□ -2.45
NPLOC4-205ENST00000571562 SIPA1L3O60292 1781 aaPredicted RBP-0.26□□□□□ -2.45
NPLOC4-205ENST00000571562 IFT140Q96RY7 1462 aa-0.26□□□□□ -2.45
NPLOC4-205ENST00000571562 CCL18P55774 89 aa-0.26□□□□□ -2.45
NPLOC4-205ENST00000571562 KRTAP19-8Q3LI54 63 aa-0.26□□□□□ -2.45
NPLOC4-205ENST00000571562 C10orf128Q5T292 105 aa-0.26□□□□□ -2.45
NPLOC4-205ENST00000571562 LSM10Q969L4 123 aaKnown RBP-0.26□□□□□ -2.45
NPLOC4-205ENST00000571562 SONP18583 2426 aaKnown RBP-0.27□□□□□ -2.45
NPLOC4-205ENST00000571562 LAMA2P24043 3122 aaKnown RBP-0.27□□□□□ -2.45
NPLOC4-205ENST00000571562 USF3Q68DE3 2245 aa-0.27□□□□□ -2.45
NPLOC4-205ENST00000571562 TRAV13-2A0A0B4J235 113 aa-0.27□□□□□ -2.45
NPLOC4-205ENST00000571562 C10orf142B7Z368 130 aa-0.27□□□□□ -2.45
NPLOC4-205ENST00000571562 M0R135 149 aa-0.27□□□□□ -2.45
NPLOC4-205ENST00000571562 MT4P47944 62 aa-0.27□□□□□ -2.45
NPLOC4-205ENST00000571562 LAMA5O15230 3695 aa-0.27□□□□□ -2.45
NPLOC4-205ENST00000571562 HIVEP1P15822 2718 aa-0.27□□□□□ -2.45
NPLOC4-205ENST00000571562 MYH8P13535 1937 aa-0.27□□□□□ -2.45
NPLOC4-205ENST00000571562 IFT172Q9UG01 1749 aa-0.27□□□□□ -2.45
NPLOC4-205ENST00000571562 TENM2Q9NT68 2774 aa-0.28□□□□□ -2.45
NPLOC4-205ENST00000571562 CACNA1AO00555 2505 aa-0.28□□□□□ -2.45
NPLOC4-205ENST00000571562 R4GMQ9 66 aa-0.28□□□□□ -2.45
NPLOC4-205ENST00000571562 STAB2Q8WWQ8 2551 aa-0.28□□□□□ -2.45
NPLOC4-205ENST00000571562 BIRC6Q9NR09 4857 aa-0.28□□□□□ -2.45
NPLOC4-205ENST00000571562 ACANP16112 2415 aa-0.28□□□□□ -2.45
NPLOC4-205ENST00000571562 PKD1L1Q8TDX9 2849 aa-0.28□□□□□ -2.45
NPLOC4-205ENST00000571562 LRP1BQ9NZR2 4599 aa-0.29□□□□□ -2.46
NPLOC4-205ENST00000571562 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.29□□□□□ -2.46
NPLOC4-205ENST00000571562 ZANQ9Y493 2812 aa-0.29□□□□□ -2.46
NPLOC4-205ENST00000571562 M0R3E3 92 aa-0.29□□□□□ -2.46
NPLOC4-205ENST00000571562 GNG7O60262 68 aa-0.29□□□□□ -2.46
NPLOC4-205ENST00000571562 BCE1O60756 84 aa-0.29□□□□□ -2.46
NPLOC4-205ENST00000571562 PAIP2BQ9ULR5 123 aaKnown RBP-0.29□□□□□ -2.46
NPLOC4-205ENST00000571562 PLXNB2O15031 1838 aa-0.29□□□□□ -2.46
NPLOC4-205ENST00000571562 SPEF2Q9C093 1822 aa-0.29□□□□□ -2.46
NPLOC4-205ENST00000571562 HSPG2P98160 4391 aa-0.3□□□□□ -2.46
NPLOC4-205ENST00000571562 LPAP08519 4548 aa-0.3□□□□□ -2.46
NPLOC4-205ENST00000571562 NDUFA2O43678 99 aa-0.3□□□□□ -2.46
NPLOC4-205ENST00000571562 SELENOWP63302 87 aa-0.3□□□□□ -2.46
NPLOC4-205ENST00000571562 SPAG11BQ08648 103 aa-0.3□□□□□ -2.46
NPLOC4-205ENST00000571562 CCDC58Q4VC31 144 aa-0.3□□□□□ -2.46
NPLOC4-205ENST00000571562 MEIG1Q5JSS6 88 aa-0.3□□□□□ -2.46
NPLOC4-205ENST00000571562 SPAG11AQ6PDA7 123 aa-0.3□□□□□ -2.46
NPLOC4-205ENST00000571562 TTC9CQ8N5M4 171 aa-0.3□□□□□ -2.46
NPLOC4-205ENST00000571562 Q8N8P6 123 aa-0.3□□□□□ -2.46
NPLOC4-205ENST00000571562 AQP10Q96PS8 301 aa-0.3□□□□□ -2.46
NPLOC4-205ENST00000571562 FAT3Q8TDW7 4589 aa-0.3□□□□□ -2.46
NPLOC4-205ENST00000571562 ABCA13Q86UQ4 5058 aa-0.3□□□□□ -2.46
NPLOC4-205ENST00000571562 DNHD1Q96M86 4753 aa-0.31□□□□□ -2.46
NPLOC4-205ENST00000571562 CTXND1A0A1B0GTU2 59 aa-0.31□□□□□ -2.46
NPLOC4-205ENST00000571562 HAMPP81172 84 aa-0.31□□□□□ -2.46
NPLOC4-205ENST00000571562 LINC00470Q9BZP3 86 aa-0.31□□□□□ -2.46
NPLOC4-205ENST00000571562 FLNAP21333 2647 aaKnown RBP-0.31□□□□□ -2.46
NPLOC4-205ENST00000571562 EPG5Q9HCE0 2579 aa-0.31□□□□□ -2.46
NPLOC4-205ENST00000571562 NF1P21359 2839 aa-0.32□□□□□ -2.46
NPLOC4-205ENST00000571562 BSNQ9UPA5 3926 aa-0.32□□□□□ -2.46
NPLOC4-205ENST00000571562 TRAV22A0A0B4J277 110 aa-0.32□□□□□ -2.46
NPLOC4-205ENST00000571562 SPAARA0A1B0GVQ0 90 aa-0.32□□□□□ -2.46
NPLOC4-205ENST00000571562 FAM25AB3EWG3 89 aa-0.32□□□□□ -2.46
NPLOC4-205ENST00000571562 FAM25CB3EWG5 89 aa-0.32□□□□□ -2.46
NPLOC4-205ENST00000571562 FAM25GB3EWG6 89 aa-0.32□□□□□ -2.46
NPLOC4-205ENST00000571562 SPTBN1Q01082 2364 aaKnown RBP-0.32□□□□□ -2.46
NPLOC4-205ENST00000571562 EP300Q09472 2414 aaPredicted RBP-0.33□□□□□ -2.46
NPLOC4-205ENST00000571562 DOCK1Q14185 1865 aa-0.33□□□□□ -2.46
NPLOC4-205ENST00000571562 SPTBN4Q9H254 2564 aa-0.33□□□□□ -2.46
NPLOC4-205ENST00000571562 MYCBP2O75592 4640 aa-0.33□□□□□ -2.46
NPLOC4-205ENST00000571562 GRIN2AQ12879 1464 aa-0.33□□□□□ -2.46
NPLOC4-205ENST00000571562 LRRC37A3O60309 1634 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms