RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 SPG11Q96JI7 2443 aa-0.33□□□□□ -2.46
SNORA40.12-201ENST00000516329 ASCC3Q8N3C0 2202 aaKnown RBP-0.33□□□□□ -2.46
SNORA40.12-201ENST00000516329 FMN2Q9NZ56 1722 aa-0.33□□□□□ -2.46
SNORA40.12-201ENST00000516329 PLXNA2O75051 1894 aa-0.33□□□□□ -2.46
SNORA40.12-201ENST00000516329 NUP210LQ5VU65 1888 aa-0.33□□□□□ -2.46
SNORA40.12-201ENST00000516329 TRPM7Q96QT4 1865 aa-0.33□□□□□ -2.46
SNORA40.12-201ENST00000516329 MYO5AQ9Y4I1 1855 aaKnown RBP-0.33□□□□□ -2.46
SNORA40.12-201ENST00000516329 MUC3AQ02505 3323 aa-0.33□□□□□ -2.46
SNORA40.12-201ENST00000516329 FANCMQ8IYD8 2048 aa-0.33□□□□□ -2.46
SNORA40.12-201ENST00000516329 MAP3K1Q13233 1512 aa-0.33□□□□□ -2.46
SNORA40.12-201ENST00000516329 CEP290O15078 2479 aa-0.33□□□□□ -2.46
SNORA40.12-201ENST00000516329 MYOM1P52179 1685 aa-0.33□□□□□ -2.46
SNORA40.12-201ENST00000516329 ZNF831Q5JPB2 1677 aa-0.33□□□□□ -2.46
SNORA40.12-201ENST00000516329 KIF1BO60333 1816 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 FREM3P0C091 2139 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 GAPVD1Q14C86 1478 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 PLEKHH2Q8IVE3 1493 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 MAGI1Q96QZ7 1491 aaPredicted RBP-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 IFT140Q96RY7 1462 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 PTPRDP23468 1912 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 HELZP42694 1942 aaKnown RBP-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 TRAV12-2A0A075B6T6 113 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 TRAV22A0A0B4J277 110 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 TRBV6-1A0A0K0K1D8 114 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 LOC107986453A0A1B0GWG9 222 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 ARL5CA6NH57 179 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 SMIM23A6NLE4 172 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 OOSP1A8MZH6 123 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 FHAD1B1AJZ9 1412 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 HCG22E2RYF7 251 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 ZNF670-ZNF695F2Z2N8 137 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 G3V2T6 193 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 H3BQV1 296 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 M0R135 149 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 PGRMC1O00264 195 aaKnown RBP-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 HMGN4O00479 90 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 DEGS1O15121 323 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 NPFFO15130 113 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 NDUFC2O95298 119 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 TPM3P06753 285 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 FABP1P07148 127 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 MT1GP13640 62 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 TPT1P13693 172 aaKnown RBP-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 GCHFRP30047 84 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 ANP32AP39687 249 aaKnown RBP-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 DNAJB13P59910 316 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 PCBD1P61457 104 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 VBP1P61758 197 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 TPM4P67936 248 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 PSPHP78330 225 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 MT1HP80294 61 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 MT1XP80297 61 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 SSBP1Q04837 148 aaKnown RBP-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 HSD52Q0P140 79 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 PRDM2Q13029 1718 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 DOCK1Q14185 1865 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 SPCS2Q15005 226 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 TMED2Q15363 201 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 TMEM128Q5BJH2 165 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 S100A7L2Q5SY68 101 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 CCDC122Q5T0U0 273 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 LYRM7Q5U5X0 104 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 C10orf113Q5VZT2 155 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 Q6JHZ5 121 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 IDO2Q6ZQW0 420 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 ANKRD31Q8N7Z5 1873 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 CCDC168Q8NDH2 2452 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 SPTSSBQ8NFR3 76 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 DEFB105AQ8NG35 78 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 OR4B1Q8NGF8 309 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 OR8J3Q8NGG0 315 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 VSTM2AQ8TAG5 236 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 PPDPFLQ8WWR9 84 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 MAFIPQ8WZ33 124 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 ARL11Q969Q4 196 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 LINC01600Q96MT4 127 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 YPEL2Q96QA6 119 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 DDA1Q9BW61 102 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 TCEAL2Q9H3H9 227 aaPredicted RBP-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 BANF2Q9H503 90 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 YTHDC2Q9H6S0 1430 aaKnown RBP-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 BIN3Q9NQY0 253 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 BATF3Q9NR55 127 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 MED11Q9P086 117 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 NRXN2Q9P2S2 1712 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 ERG28Q9UKR5 140 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 BOKQ9UMX3 212 aaPredicted RBP-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 SSR3Q9UNL2 185 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 NOP16Q9Y3C1 178 aaKnown RBP-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 LINC01558Q9Y6Z2 57 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 V9GYV3 84 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 ESPL1Q14674 2120 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 PHIPQ8WWQ0 1821 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 KDM5AP29375 1690 aaKnown RBP-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 EHBP1L1Q8N3D4 1523 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 TMEM2Q9UHN6 1383 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 DNAH14Q0VDD8 3507 aa-0.34□□□□□ -2.46
SNORA40.12-201ENST00000516329 CICQ96RK0 1608 aaPredicted RBP-0.35□□□□□ -2.46
SNORA40.12-201ENST00000516329 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.35□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms