RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 CCL20P78556 96 aa12.61□□□□□ -0.39
SNHG6-204ENST00000521127 HAMPP81172 84 aa12.61□□□□□ -0.39
SNHG6-204ENST00000521127 BTN1A1Q13410 526 aa12.61□□□□□ -0.39
SNHG6-204ENST00000521127 ANXA2RQ3ZCQ2 193 aa12.61□□□□□ -0.39
SNHG6-204ENST00000521127 SFT2D1Q8WV19 159 aa12.61□□□□□ -0.39
SNHG6-204ENST00000521127 MAP1LC3B2A6NCE7 125 aa12.6□□□□□ -0.39
SNHG6-204ENST00000521127 KLLNB2CW77 178 aa12.6□□□□□ -0.39
SNHG6-204ENST00000521127 M0R3E3 92 aa12.6□□□□□ -0.39
SNHG6-204ENST00000521127 GCSHP23434 173 aa12.6□□□□□ -0.39
SNHG6-204ENST00000521127 CDC34P49427 236 aaPredicted RBP12.6□□□□□ -0.39
SNHG6-204ENST00000521127 TCL1AP56279 114 aa12.6□□□□□ -0.39
SNHG6-204ENST00000521127 SRSF3P84103 164 aaKnown RBP12.6□□□□□ -0.39
SNHG6-204ENST00000521127 GCSAMLQ5JQS6 135 aa12.6□□□□□ -0.39
SNHG6-204ENST00000521127 RAB24Q969Q5 203 aa12.6□□□□□ -0.39
SNHG6-204ENST00000521127 FAM19A4Q96LR4 140 aa12.6□□□□□ -0.39
SNHG6-204ENST00000521127 MAP1LC3BQ9GZQ8 125 aa12.6□□□□□ -0.39
SNHG6-204ENST00000521127 SMDT1Q9H4I9 107 aa12.6□□□□□ -0.39
SNHG6-204ENST00000521127 DNAJC4Q9NNZ3 241 aa12.6□□□□□ -0.39
SNHG6-204ENST00000521127 CRYBA4P53673 196 aa12.59□□□□□ -0.39
SNHG6-204ENST00000521127 FAM122CQ6P4D5 195 aa12.59□□□□□ -0.39
SNHG6-204ENST00000521127 MRPL16Q9NX20 251 aaKnown RBP12.59□□□□□ -0.39
SNHG6-204ENST00000521127 PRO0255Q9UI72 69 aa12.59□□□□□ -0.39
SNHG6-204ENST00000521127 TP53TG3Q9ULZ0 132 aa12.59□□□□□ -0.39
SNHG6-204ENST00000521127 TMEM218A2RU14 115 aa12.58□□□□□ -0.4
SNHG6-204ENST00000521127 NDUFS6O75380 124 aaKnown RBP12.58□□□□□ -0.4
SNHG6-204ENST00000521127 STAG3L2P0CL84 134 aa12.58□□□□□ -0.4
SNHG6-204ENST00000521127 STAG3L3P0CL85 134 aa12.58□□□□□ -0.4
SNHG6-204ENST00000521127 RNASE4P34096 147 aaKnown RBP12.58□□□□□ -0.4
SNHG6-204ENST00000521127 FHL2Q14192 279 aa12.58□□□□□ -0.4
SNHG6-204ENST00000521127 GUK1Q16774 197 aa12.58□□□□□ -0.4
SNHG6-204ENST00000521127 ZNF506Q5JVG8 444 aa12.58□□□□□ -0.4
SNHG6-204ENST00000521127 C10orf91Q5T1B1 145 aa12.58□□□□□ -0.4
SNHG6-204ENST00000521127 Q6ZQT7 251 aa12.58□□□□□ -0.4
SNHG6-204ENST00000521127 C8orf49Q96NF6 230 aa12.58□□□□□ -0.4
SNHG6-204ENST00000521127 AGPAT4-IT1Q9H0P7 198 aa12.58□□□□□ -0.4
SNHG6-204ENST00000521127 MSRB1Q9NZV6 116 aa12.58□□□□□ -0.4
SNHG6-204ENST00000521127 MRPL23Q16540 153 aaKnown RBP12.57□□□□□ -0.4
SNHG6-204ENST00000521127 WFDC10BQ8IUB3 73 aa12.57□□□□□ -0.4
SNHG6-204ENST00000521127 HHLA3Q9XRX5 114 aa12.57□□□□□ -0.4
SNHG6-204ENST00000521127 LY96Q9Y6Y9 160 aa12.57□□□□□ -0.4
SNHG6-204ENST00000521127 TRAV9-2A0A087WT02 112 aa12.56□□□□□ -0.4
SNHG6-204ENST00000521127 C9JQL5 133 aa12.56□□□□□ -0.4
SNHG6-204ENST00000521127 FAM229AH3BQW9 127 aa12.56□□□□□ -0.4
SNHG6-204ENST00000521127 ZNF253O75346 499 aa12.56□□□□□ -0.4
SNHG6-204ENST00000521127 NDUFB4O95168 129 aa12.56□□□□□ -0.4
SNHG6-204ENST00000521127 PEA15Q15121 130 aa12.56□□□□□ -0.4
SNHG6-204ENST00000521127 IBA57Q5T440 356 aaKnown RBP12.56□□□□□ -0.4
SNHG6-204ENST00000521127 NEGR1Q7Z3B1 354 aa12.56□□□□□ -0.4
SNHG6-204ENST00000521127 MRPL53Q96EL3 112 aaKnown RBP12.56□□□□□ -0.4
SNHG6-204ENST00000521127 LINC00477Q96M19 166 aa12.56□□□□□ -0.4
SNHG6-204ENST00000521127 VGLL1Q99990 258 aa12.56□□□□□ -0.4
SNHG6-204ENST00000521127 MRPL32Q9BYC8 188 aaKnown RBP12.56□□□□□ -0.4
SNHG6-204ENST00000521127 TRBV19A0A075B6N1 114 aa12.55□□□□□ -0.4
SNHG6-204ENST00000521127 RBFOX3A6NFN3 312 aa12.55□□□□□ -0.4
SNHG6-204ENST00000521127 BCL2P10415 239 aa12.55□□□□□ -0.4
SNHG6-204ENST00000521127 ADCYAP1P18509 176 aa12.55□□□□□ -0.4
SNHG6-204ENST00000521127 TAGLN2P37802 199 aaKnown RBP12.55□□□□□ -0.4
SNHG6-204ENST00000521127 FGF8P55075 233 aaPredicted RBP12.55□□□□□ -0.4
SNHG6-204ENST00000521127 SLAQ13239 276 aa12.55□□□□□ -0.4
SNHG6-204ENST00000521127 KHDC3LQ587J8 217 aa12.55□□□□□ -0.4
SNHG6-204ENST00000521127 PRR9Q5T870 116 aa12.55□□□□□ -0.4
SNHG6-204ENST00000521127 Q6ZSN1 163 aa12.55□□□□□ -0.4
SNHG6-204ENST00000521127 ZFAND2AQ8N6M9 145 aa12.55□□□□□ -0.4
SNHG6-204ENST00000521127 CARHSP1Q9Y2V2 147 aaKnown RBP12.55□□□□□ -0.4
SNHG6-204ENST00000521127 DNAH8Q96JB1 4490 aa12.54□□□□□ -0.4
SNHG6-204ENST00000521127 A0A1B0GV50 99 aa12.54□□□□□ -0.4
SNHG6-204ENST00000521127 A0A1W2PPV4 95 aa12.54□□□□□ -0.4
SNHG6-204ENST00000521127 CRISP2P16562 243 aa12.54□□□□□ -0.4
SNHG6-204ENST00000521127 OR1L4Q8NGR5 311 aa12.54□□□□□ -0.4
SNHG6-204ENST00000521127 PFDN5Q99471 154 aa12.54□□□□□ -0.4
SNHG6-204ENST00000521127 IFNA1P01562 189 aa12.53□□□□□ -0.4
SNHG6-204ENST00000521127 GPX1P07203 203 aa12.53□□□□□ -0.4
SNHG6-204ENST00000521127 PPT1P50897 306 aa12.53□□□□□ -0.4
SNHG6-204ENST00000521127 SUN5Q8TC36 379 aa12.53□□□□□ -0.4
SNHG6-204ENST00000521127 SEC11CQ9BY50 192 aa12.53□□□□□ -0.4
SNHG6-204ENST00000521127 TREM1Q9NP99 234 aa12.53□□□□□ -0.4
SNHG6-204ENST00000521127 MANBALQ9NQG1 85 aa12.53□□□□□ -0.4
SNHG6-204ENST00000521127 IGHV1OR15-1A0A075B7D0 117 aa12.52□□□□□ -0.41
SNHG6-204ENST00000521127 K7EQD1 137 aa12.52□□□□□ -0.41
SNHG6-204ENST00000521127 EIF3GO75821 320 aaKnown RBP eCLIP12.52□□□□□ -0.41
SNHG6-204ENST00000521127 CXorf1O96002 111 aa12.52□□□□□ -0.41
SNHG6-204ENST00000521127 C9orf47Q6ZRZ4 202 aa12.52□□□□□ -0.41
SNHG6-204ENST00000521127 MIR17HGQ75NE6 70 aa12.52□□□□□ -0.41
SNHG6-204ENST00000521127 EXOC3-AS1Q8N2X6 119 aa12.52□□□□□ -0.41
SNHG6-204ENST00000521127 FAM167A-AS1Q96KT0 104 aa12.52□□□□□ -0.41
SNHG6-204ENST00000521127 GNG13Q9P2W3 67 aa12.52□□□□□ -0.41
SNHG6-204ENST00000521127 PRELID1Q9Y255 219 aa12.52□□□□□ -0.41
SNHG6-204ENST00000521127 ARL2-SNX15V9GYD0 113 aa12.52□□□□□ -0.41
SNHG6-204ENST00000521127 IGKV2-40A0A087WW87 121 aaPredicted RBP12.51□□□□□ -0.41
SNHG6-204ENST00000521127 J3QL48 77 aa12.51□□□□□ -0.41
SNHG6-204ENST00000521127 K7EP13 123 aa12.51□□□□□ -0.41
SNHG6-204ENST00000521127 HMGB3O15347 200 aaKnown RBP12.51□□□□□ -0.41
SNHG6-204ENST00000521127 IGKV2D-40P01614 121 aaPredicted RBP12.51□□□□□ -0.41
SNHG6-204ENST00000521127 SRP19P09132 144 aaKnown RBP12.51□□□□□ -0.41
SNHG6-204ENST00000521127 SFTA3P0C7M3 94 aa12.51□□□□□ -0.41
SNHG6-204ENST00000521127 ARL14EPLP0DKL9 152 aa12.51□□□□□ -0.41
SNHG6-204ENST00000521127 HIST1H1EP10412 219 aaKnown RBP12.51□□□□□ -0.41
SNHG6-204ENST00000521127 EVI2AP22794 236 aa12.51□□□□□ -0.41
SNHG6-204ENST00000521127 TMEM70Q9BUB7 260 aa12.51□□□□□ -0.41
SNHG6-204ENST00000521127 EIF5A2Q9GZV4 153 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 1054.1 ms