RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 PF4V1P10720 104 aa8.18□□□□□ -1.1
CDK5RAP3-225ENST00000582482 ATP5G2Q06055 141 aa8.18□□□□□ -1.1
CDK5RAP3-225ENST00000582482 PRSS57Q6UWY2 283 aa8.18□□□□□ -1.1
CDK5RAP3-225ENST00000582482 LYPD1Q8N2G4 141 aa8.18□□□□□ -1.1
CDK5RAP3-225ENST00000582482 OR4B1Q8NGF8 309 aa8.18□□□□□ -1.1
CDK5RAP3-225ENST00000582482 ZNF48Q96MX3 618 aaPredicted RBP8.18□□□□□ -1.1
CDK5RAP3-225ENST00000582482 PSMG3-AS1Q96PY0 264 aa8.18□□□□□ -1.1
CDK5RAP3-225ENST00000582482 SIGLEC8Q9NYZ4 499 aa8.18□□□□□ -1.1
CDK5RAP3-225ENST00000582482 SYS1-DBNDD2H3BUS1 97 aa8.18□□□□□ -1.1
CDK5RAP3-225ENST00000582482 PSG9Q00887 426 aa8.18□□□□□ -1.1
CDK5RAP3-225ENST00000582482 RIGQ13278 110 aa8.18□□□□□ -1.1
CDK5RAP3-225ENST00000582482 TM4SF20Q53R12 229 aa8.18□□□□□ -1.1
CDK5RAP3-225ENST00000582482 PRSS3P2Q8NHM4 247 aa8.18□□□□□ -1.1
CDK5RAP3-225ENST00000582482 EEF1AKMT3Q96AZ1 226 aa8.18□□□□□ -1.1
CDK5RAP3-225ENST00000582482 C18orf15Q96N68 181 aa8.18□□□□□ -1.1
CDK5RAP3-225ENST00000582482 TMEM70Q9BUB7 260 aa8.18□□□□□ -1.1
CDK5RAP3-225ENST00000582482 MOB4Q9Y3A3 225 aa8.18□□□□□ -1.1
CDK5RAP3-225ENST00000582482 ITPR3Q14573 2671 aa8.17□□□□□ -1.1
CDK5RAP3-225ENST00000582482 GOSR1O95249 250 aa8.17□□□□□ -1.1
CDK5RAP3-225ENST00000582482 ARL3P36405 182 aa8.17□□□□□ -1.1
CDK5RAP3-225ENST00000582482 PDE6HQ13956 83 aa8.17□□□□□ -1.1
CDK5RAP3-225ENST00000582482 GPHB5Q86YW7 130 aa8.17□□□□□ -1.1
CDK5RAP3-225ENST00000582482 FER1L6-AS1Q8NA97 138 aa8.17□□□□□ -1.1
CDK5RAP3-225ENST00000582482 OR10AG1Q8NH19 301 aa8.17□□□□□ -1.1
CDK5RAP3-225ENST00000582482 NPSP0C0P6 89 aa8.17□□□□□ -1.1
CDK5RAP3-225ENST00000582482 HNRNPA3P51991 378 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-225ENST00000582482 HIST2H2BCQ6DN03 193 aa8.17□□□□□ -1.1
CDK5RAP3-225ENST00000582482 CLEC2AQ6UVW9 174 aa8.17□□□□□ -1.1
CDK5RAP3-225ENST00000582482 NDFIP1Q9BT67 221 aa8.17□□□□□ -1.1
CDK5RAP3-225ENST00000582482 IGHV4-59P01825 116 aa8.16□□□□□ -1.1
CDK5RAP3-225ENST00000582482 PRELID3AQ96N28 172 aa8.16□□□□□ -1.1
CDK5RAP3-225ENST00000582482 WNK1Q9H4A3 2382 aa8.16□□□□□ -1.1
CDK5RAP3-225ENST00000582482 TRBV6-1A0A0K0K1D8 114 aa8.15□□□□□ -1.1
CDK5RAP3-225ENST00000582482 METTL26Q96S19 204 aa8.15□□□□□ -1.1
CDK5RAP3-225ENST00000582482 FLNAP21333 2647 aaKnown RBP8.15□□□□□ -1.1
CDK5RAP3-225ENST00000582482 PRRC2AP48634 2157 aaKnown RBP8.15□□□□□ -1.1
CDK5RAP3-225ENST00000582482 TRAV9-2A0A087WT02 112 aa8.15□□□□□ -1.1
CDK5RAP3-225ENST00000582482 TSPOP30536 169 aa8.15□□□□□ -1.1
CDK5RAP3-225ENST00000582482 SRSF1Q07955 248 aaKnown RBP eCLIP8.15□□□□□ -1.13e-9■□□□□ 10.4
CDK5RAP3-225ENST00000582482 C19orf54Q5BKX5 351 aa8.15□□□□□ -1.1
CDK5RAP3-225ENST00000582482 FAM104BQ5XKR9 115 aa8.15□□□□□ -1.1
CDK5RAP3-225ENST00000582482 FA2HQ7L5A8 372 aa8.15□□□□□ -1.1
CDK5RAP3-225ENST00000582482 RNF185Q96GF1 192 aa8.15□□□□□ -1.1
CDK5RAP3-225ENST00000582482 C16orf92Q96LL3 132 aa8.15□□□□□ -1.1
CDK5RAP3-225ENST00000582482 AP5S1Q9NUS5 200 aa8.15□□□□□ -1.1
CDK5RAP3-225ENST00000582482 PGPEP1Q9NXJ5 209 aa8.15□□□□□ -1.1
CDK5RAP3-225ENST00000582482 MTORP42345 2549 aa8.15□□□□□ -1.11
CDK5RAP3-225ENST00000582482 MSMBP08118 114 aa8.14□□□□□ -1.11
CDK5RAP3-225ENST00000582482 RNF24Q9Y225 148 aa8.14□□□□□ -1.11
CDK5RAP3-225ENST00000582482 RPLP1P05386 114 aaKnown RBP8.14□□□□□ -1.11
CDK5RAP3-225ENST00000582482 SFTPCP11686 197 aa8.14□□□□□ -1.11
CDK5RAP3-225ENST00000582482 CKS2P33552 79 aa8.14□□□□□ -1.11
CDK5RAP3-225ENST00000582482 ZNF738Q8NE65 137 aa8.14□□□□□ -1.11
CDK5RAP3-225ENST00000582482 UQCR10Q9UDW1 63 aa8.14□□□□□ -1.11
CDK5RAP3-225ENST00000582482 UFC1Q9Y3C8 167 aa8.14□□□□□ -1.11
CDK5RAP3-225ENST00000582482 ITPR2Q14571 2701 aa8.14□□□□□ -1.11
CDK5RAP3-225ENST00000582482 FAM231BA6NCW3 169 aa8.13□□□□□ -1.11
CDK5RAP3-225ENST00000582482 H3BVH4 76 aa8.13□□□□□ -1.11
CDK5RAP3-225ENST00000582482 IGKV3-20P01619 116 aa8.13□□□□□ -1.11
CDK5RAP3-225ENST00000582482 IGLC6P0CF74 106 aa8.13□□□□□ -1.11
CDK5RAP3-225ENST00000582482 DEFB112Q30KQ8 113 aa8.13□□□□□ -1.11
CDK5RAP3-225ENST00000582482 OR4X2Q8NGF9 303 aa8.13□□□□□ -1.11
CDK5RAP3-225ENST00000582482 CHCHD1Q96BP2 118 aaKnown RBP8.13□□□□□ -1.11
CDK5RAP3-225ENST00000582482 TMEM208Q9BTX3 173 aa8.13□□□□□ -1.11
CDK5RAP3-225ENST00000582482 LAMTOR2Q9Y2Q5 125 aa8.13□□□□□ -1.11
CDK5RAP3-225ENST00000582482 NOTCH3Q9UM47 2321 aa8.13□□□□□ -1.11
CDK5RAP3-225ENST00000582482 A0A087X0K7 114 aa8.12□□□□□ -1.11
CDK5RAP3-225ENST00000582482 OR5AL1P0C617 328 aa8.12□□□□□ -1.11
CDK5RAP3-225ENST00000582482 LBHQ53QV2 105 aaPredicted RBP8.12□□□□□ -1.11
CDK5RAP3-225ENST00000582482 SAPCD1Q5SSQ6 148 aa8.12□□□□□ -1.11
CDK5RAP3-225ENST00000582482 ZNF747Q9BV97 191 aa8.12□□□□□ -1.11
CDK5RAP3-225ENST00000582482 TTTY13Q9BZ97 58 aa8.12□□□□□ -1.11
CDK5RAP3-225ENST00000582482 PPP1R14DQ9NXH3 145 aa8.12□□□□□ -1.11
CDK5RAP3-225ENST00000582482 TRBV7-1A0A0A6YYK4 115 aa8.12□□□□□ -1.11
CDK5RAP3-225ENST00000582482 A6NDX4 124 aa8.12□□□□□ -1.11
CDK5RAP3-225ENST00000582482 FABP5P3A8MUU1 101 aa8.12□□□□□ -1.11
CDK5RAP3-225ENST00000582482 CACNG7P62955 275 aa8.12□□□□□ -1.11
CDK5RAP3-225ENST00000582482 HIST1H1AQ02539 215 aaPredicted RBP8.11□□□□□ -1.11
CDK5RAP3-225ENST00000582482 ANKRD39Q53RE8 183 aa8.11□□□□□ -1.11
CDK5RAP3-225ENST00000582482 MPV17L2Q567V2 206 aa8.11□□□□□ -1.11
CDK5RAP3-225ENST00000582482 ORMDL3Q8N138 153 aa8.11□□□□□ -1.11
CDK5RAP3-225ENST00000582482 MAP1LC3CQ9BXW4 147 aa8.11□□□□□ -1.11
CDK5RAP3-225ENST00000582482 DKK2Q9UBU2 259 aa8.11□□□□□ -1.11
CDK5RAP3-225ENST00000582482 IGHV7-4-1A0A0J9YVY3 117 aa8.11□□□□□ -1.11
CDK5RAP3-225ENST00000582482 M0R381 172 aa8.11□□□□□ -1.11
CDK5RAP3-225ENST00000582482 TMEM78Q5T7P6 136 aa8.11□□□□□ -1.11
CDK5RAP3-225ENST00000582482 ZNF493Q6ZR52 646 aa8.11□□□□□ -1.11
CDK5RAP3-225ENST00000582482 C18orf65Q6ZTR6 163 aa8.11□□□□□ -1.11
CDK5RAP3-225ENST00000582482 MUC4Q99102 2169 aa8.11□□□□□ -1.11
CDK5RAP3-225ENST00000582482 GNRH2O43555 120 aa8.1□□□□□ -1.11
CDK5RAP3-225ENST00000582482 TGFAP01135 160 aa8.1□□□□□ -1.11
CDK5RAP3-225ENST00000582482 U3KQE9 123 aa8.1□□□□□ -1.11
CDK5RAP3-225ENST00000582482 JMJD1CQ15652 2540 aa8.1□□□□□ -1.11
CDK5RAP3-225ENST00000582482 RNASE4P34096 147 aaKnown RBP8.1□□□□□ -1.11
CDK5RAP3-225ENST00000582482 DUX3Q96PT4 197 aa8.1□□□□□ -1.11
CDK5RAP3-225ENST00000582482 MEGF9Q9H1U4 602 aa8.1□□□□□ -1.11
CDK5RAP3-225ENST00000582482 BEX4Q9NWD9 120 aaPredicted RBP8.1□□□□□ -1.11
CDK5RAP3-225ENST00000582482 SCGB2A1O75556 95 aa8.09□□□□□ -1.11
CDK5RAP3-225ENST00000582482 IGHG2P01859 326 aa8.09□□□□□ -1.11
CDK5RAP3-225ENST00000582482 BMI1P35226 326 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms