RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 CACNA1BQ00975 2339 aa14.95□□□□□ -0.02
PCF11-203ENST00000530304 HSD52Q0P140 79 aa14.95□□□□□ -0.02
PCF11-203ENST00000530304 C8orf86Q6ZUL3 223 aa14.95□□□□□ -0.02
PCF11-203ENST00000530304 UBTD1Q9HAC8 227 aa14.95□□□□□ -0.02
PCF11-203ENST00000530304 TRBV7-1A0A0A6YYK4 115 aa14.94□□□□□ -0.02
PCF11-203ENST00000530304 TRGV3P03979 118 aa14.94□□□□□ -0.02
PCF11-203ENST00000530304 IGF2RP11717 2491 aa14.94□□□□□ -0.02
PCF11-203ENST00000530304 A6NDN8 102 aa14.94□□□□□ -0.02
PCF11-203ENST00000530304 H3BRM9 83 aa14.93□□□□□ -0.02
PCF11-203ENST00000530304 ODF1Q14990 250 aa14.93□□□□□ -0.02
PCF11-203ENST00000530304 OR4X2Q8NGF9 303 aa14.93□□□□□ -0.02
PCF11-203ENST00000530304 GAGE12BA1L429 117 aa14.93□□□□□ -0.02
PCF11-203ENST00000530304 PRSS1P07477 247 aa14.93□□□□□ -0.02
PCF11-203ENST00000530304 EFNA4P52798 201 aa14.93□□□□□ -0.02
PCF11-203ENST00000530304 LMO4P61968 165 aa14.93□□□□□ -0.02
PCF11-203ENST00000530304 RNF151Q2KHN1 245 aa14.93□□□□□ -0.02
PCF11-203ENST00000530304 COL25A1Q9BXS0 654 aaPredicted RBP14.93□□□□□ -0.02
PCF11-203ENST00000530304 BPESC1Q9GZL8 116 aa14.93□□□□□ -0.02
PCF11-203ENST00000530304 ZMAT4Q9H898 229 aa14.93□□□□□ -0.02
PCF11-203ENST00000530304 IGHV7-4-1A0A0J9YVY3 117 aa14.92□□□□□ -0.02
PCF11-203ENST00000530304 NPFFO15130 113 aa14.92□□□□□ -0.02
PCF11-203ENST00000530304 Q6ZQT7 251 aa14.92□□□□□ -0.02
PCF11-203ENST00000530304 C5orf56Q8N8D9 126 aa14.92□□□□□ -0.02
PCF11-203ENST00000530304 Q8N8P6 123 aa14.92□□□□□ -0.02
PCF11-203ENST00000530304 TMEM158Q8WZ71 300 aa14.92□□□□□ -0.02
PCF11-203ENST00000530304 HHLA3Q9XRX5 114 aa14.92□□□□□ -0.02
PCF11-203ENST00000530304 IGLV2-18A0A075B6J9 118 aa14.92□□□□□ -0.02
PCF11-203ENST00000530304 OR2K2Q8NGT1 345 aa14.92□□□□□ -0.02
PCF11-203ENST00000530304 MRPL53Q96EL3 112 aaKnown RBP14.92□□□□□ -0.02
PCF11-203ENST00000530304 C9orf118A6NHY6 69 aa14.91□□□□□ -0.02
PCF11-203ENST00000530304 C9orf47Q6ZRZ4 202 aa14.91□□□□□ -0.02
PCF11-203ENST00000530304 PIFOQ8TCI5 191 aa14.91□□□□□ -0.02
PCF11-203ENST00000530304 U3KQE9 123 aa14.91□□□□□ -0.02
PCF11-203ENST00000530304 COL6A6A6NMZ7 2263 aa14.91□□□□□ -0.02
PCF11-203ENST00000530304 SPTBN1Q01082 2364 aaKnown RBP14.91□□□□□ -0.02
PCF11-203ENST00000530304 KIR3DS1Q14943 382 aa14.91□□□□□ -0.02
PCF11-203ENST00000530304 HIF1ANQ9NWT6 349 aa14.91□□□□□ -0.02
PCF11-203ENST00000530304 GAGE10A6NGK3 116 aa14.9□□□□□ -0.02
PCF11-203ENST00000530304 ATP5G2Q06055 141 aa14.9□□□□□ -0.02
PCF11-203ENST00000530304 OCIAD2Q56VL3 154 aa14.9□□□□□ -0.02
PCF11-203ENST00000530304 IGKV2D-26A0A0A0MRZ7 120 aa14.9□□□□□ -0.02
PCF11-203ENST00000530304 TMEM219Q86XT9 240 aa14.9□□□□□ -0.02
PCF11-203ENST00000530304 AP1S3Q96PC3 154 aa14.9□□□□□ -0.02
PCF11-203ENST00000530304 TRAV26-2A0A0B4J265 109 aa14.89□□□□□ -0.03
PCF11-203ENST00000530304 COTL1Q14019 142 aa14.89□□□□□ -0.03
PCF11-203ENST00000530304 SMIM15Q7Z3B0 74 aa14.89□□□□□ -0.03
PCF11-203ENST00000530304 FOXC2Q99958 501 aa14.89□□□□□ -0.03
PCF11-203ENST00000530304 UFC1Q9Y3C8 167 aa14.89□□□□□ -0.03
PCF11-203ENST00000530304 H3BUT2 72 aa14.88□□□□□ -0.03
PCF11-203ENST00000530304 IGKCP01834 107 aa14.88□□□□□ -0.03
PCF11-203ENST00000530304 NRACQ8N912 160 aa14.88□□□□□ -0.03
PCF11-203ENST00000530304 C16orf92Q96LL3 132 aa14.88□□□□□ -0.03
PCF11-203ENST00000530304 JMJD8Q96S16 334 aa14.88□□□□□ -0.03
PCF11-203ENST00000530304 LINC00527Q9UJ94 153 aa14.88□□□□□ -0.03
PCF11-203ENST00000530304 SMIM17P0DL12 118 aa14.87□□□□□ -0.03
PCF11-203ENST00000530304 SPANXN1Q5VSR9 72 aa14.87□□□□□ -0.03
PCF11-203ENST00000530304 NAA38Q9BRA0 125 aaKnown RBP14.87□□□□□ -0.03
PCF11-203ENST00000530304 PRSS47A8MTI9 375 aa14.87□□□□□ -0.03
PCF11-203ENST00000530304 PSMG4Q5JS54 123 aa14.87□□□□□ -0.03
PCF11-203ENST00000530304 UFSP1Q6NVU6 142 aa14.87□□□□□ -0.03
PCF11-203ENST00000530304 RAB37Q96AX2 223 aa14.87□□□□□ -0.03
PCF11-203ENST00000530304 TTTY13Q9BZ97 58 aa14.87□□□□□ -0.03
PCF11-203ENST00000530304 TRAV41A0A0B4J266 112 aa14.86□□□□□ -0.03
PCF11-203ENST00000530304 A0A0G2JLM5 398 aa14.86□□□□□ -0.03
PCF11-203ENST00000530304 IGHV4-4A0A075B6R2 117 aa14.86□□□□□ -0.03
PCF11-203ENST00000530304 ATP5LO75964 103 aa14.86□□□□□ -0.03
PCF11-203ENST00000530304 LAGE3Q14657 143 aa14.86□□□□□ -0.03
PCF11-203ENST00000530304 PRR9Q5T870 116 aa14.86□□□□□ -0.03
PCF11-203ENST00000530304 GTF2H5Q6ZYL4 71 aa14.86□□□□□ -0.03
PCF11-203ENST00000530304 IGHV3OR16-10A0A075B7F0 116 aa14.85□□□□□ -0.03
PCF11-203ENST00000530304 TMEM8BA6NDV4 472 aa14.85□□□□□ -0.03
PCF11-203ENST00000530304 GTSCR1Q86UQ5 136 aa14.85□□□□□ -0.03
PCF11-203ENST00000530304 SMPXQ9UHP9 88 aa14.85□□□□□ -0.03
PCF11-203ENST00000530304 DPM2O94777 84 aa14.85□□□□□ -0.03
PCF11-203ENST00000530304 GLMPQ8WWB7 406 aa14.85□□□□□ -0.03
PCF11-203ENST00000530304 C20orf173Q96LM9 149 aa14.85□□□□□ -0.03
PCF11-203ENST00000530304 VPS13CQ709C8 3753 aa14.85□□□□□ -0.03
PCF11-203ENST00000530304 H3BVH4 76 aa14.84□□□□□ -0.03
PCF11-203ENST00000530304 TM4SF20Q53R12 229 aa14.84□□□□□ -0.03
PCF11-203ENST00000530304 MOB4Q9Y3A3 225 aa14.84□□□□□ -0.03
PCF11-203ENST00000530304 IGF1P05019 195 aa14.84□□□□□ -0.03
PCF11-203ENST00000530304 C19orf54Q5BKX5 351 aa14.84□□□□□ -0.03
PCF11-203ENST00000530304 ZC2HC1BQ5TFG8 222 aa14.84□□□□□ -0.03
PCF11-203ENST00000530304 MYOZ3Q8TDC0 251 aa14.84□□□□□ -0.03
PCF11-203ENST00000530304 FAM223BA6NKX1 122 aa14.83□□□□□ -0.03
PCF11-203ENST00000530304 FAM223AQ8IWN6 122 aa14.83□□□□□ -0.03
PCF11-203ENST00000530304 ITLN2Q8WWU7 325 aaPredicted RBP14.83□□□□□ -0.03
PCF11-203ENST00000530304 TMEM160Q9NX00 188 aa14.83□□□□□ -0.03
PCF11-203ENST00000530304 SELENOKQ9Y6D0 94 aa14.83□□□□□ -0.03
PCF11-203ENST00000530304 HIVEP3Q5T1R4 2406 aa14.83□□□□□ -0.04
PCF11-203ENST00000530304 ARL3P36405 182 aa14.83□□□□□ -0.04
PCF11-203ENST00000530304 ATP6V0BQ99437 205 aa14.83□□□□□ -0.04
PCF11-203ENST00000530304 HIGD1BQ9P298 99 aa14.83□□□□□ -0.04
PCF11-203ENST00000530304 TRAV40A0A0B4J280 105 aa14.82□□□□□ -0.04
PCF11-203ENST00000530304 J3KRW8 73 aa14.82□□□□□ -0.04
PCF11-203ENST00000530304 UNQ9165/PRO28630Q6UXU0 137 aa14.82□□□□□ -0.04
PCF11-203ENST00000530304 C9orf139Q6ZV77 190 aa14.82□□□□□ -0.04
PCF11-203ENST00000530304 MRPL35Q9NZE8 188 aaKnown RBP14.82□□□□□ -0.04
PCF11-203ENST00000530304 AKAP6Q13023 2319 aa14.82□□□□□ -0.04
PCF11-203ENST00000530304 K7EP34 96 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 204.8 ms