RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 Q86TA4 180 aa12.87□□□□□ -0.35
TRAM1-202ENST00000518678 C20orf144Q9BQM9 153 aa12.87□□□□□ -0.35
TRAM1-202ENST00000518678 TREM1Q9NP99 234 aa12.87□□□□□ -0.35
TRAM1-202ENST00000518678 TENM3Q9P273 2699 aa12.87□□□□□ -0.35
TRAM1-202ENST00000518678 C7orf71A4D174 169 aa12.86□□□□□ -0.35
TRAM1-202ENST00000518678 RBMY1A1P0DJD3 496 aaKnown RBP12.86□□□□□ -0.35
TRAM1-202ENST00000518678 RBMY1CP0DJD4 496 aa12.86□□□□□ -0.35
TRAM1-202ENST00000518678 BTN1A1Q13410 526 aa12.86□□□□□ -0.35
TRAM1-202ENST00000518678 RBMY1FQ15415 496 aaKnown RBP12.86□□□□□ -0.35
TRAM1-202ENST00000518678 SAPCD1Q5SSQ6 148 aa12.86□□□□□ -0.35
TRAM1-202ENST00000518678 EIF5A2Q9GZV4 153 aaKnown RBP12.86□□□□□ -0.35
TRAM1-202ENST00000518678 TRAV12-3A0A0B4J271 114 aa12.85□□□□□ -0.35
TRAM1-202ENST00000518678 NDUFS6O75380 124 aaKnown RBP12.85□□□□□ -0.35
TRAM1-202ENST00000518678 RNASE4P34096 147 aaKnown RBP12.85□□□□□ -0.35
TRAM1-202ENST00000518678 TMEM256Q8N2U0 113 aa12.85□□□□□ -0.35
TRAM1-202ENST00000518678 OR11H2Q8NH07 326 aa12.85□□□□□ -0.35
TRAM1-202ENST00000518678 ZFP30Q9Y2G7 519 aa12.85□□□□□ -0.35
TRAM1-202ENST00000518678 X6R8D5 127 aa12.85□□□□□ -0.35
TRAM1-202ENST00000518678 IGHV3OR16-12A0A075B7B8 117 aa12.84□□□□□ -0.35
TRAM1-202ENST00000518678 RGS13O14921 159 aa12.84□□□□□ -0.35
TRAM1-202ENST00000518678 ZNF324O75467 553 aaPredicted RBP12.84□□□□□ -0.35
TRAM1-202ENST00000518678 LTAP01374 205 aa12.84□□□□□ -0.35
TRAM1-202ENST00000518678 C8orf49Q96NF6 230 aa12.84□□□□□ -0.35
TRAM1-202ENST00000518678 NEU1Q99519 415 aa12.84□□□□□ -0.35
TRAM1-202ENST00000518678 NIPSNAP3BQ9BS92 247 aa12.84□□□□□ -0.35
TRAM1-202ENST00000518678 TMEM208Q9BTX3 173 aa12.84□□□□□ -0.35
TRAM1-202ENST00000518678 DERL1Q9BUN8 251 aa12.84□□□□□ -0.35
TRAM1-202ENST00000518678 MED9Q9NWA0 146 aa12.84□□□□□ -0.35
TRAM1-202ENST00000518678 TMEM250H0YL14 139 aa12.83□□□□□ -0.36
TRAM1-202ENST00000518678 H7BYZ3 331 aa12.83□□□□□ -0.36
TRAM1-202ENST00000518678 RPL35P42766 123 aaKnown RBP12.83□□□□□ -0.36
TRAM1-202ENST00000518678 TAS2R60P59551 318 aa12.83□□□□□ -0.36
TRAM1-202ENST00000518678 SMUG1Q53HV7 270 aa12.83□□□□□ -0.36
TRAM1-202ENST00000518678 Q6AWC8 147 aa12.82□□□□□ -0.36
TRAM1-202ENST00000518678 COX8CQ7Z4L0 72 aa12.82□□□□□ -0.36
TRAM1-202ENST00000518678 LINC01587Q99440 93 aa12.82□□□□□ -0.36
TRAM1-202ENST00000518678 DYNC2H1Q8NCM8 4307 aaKnown RBP12.82□□□□□ -0.36
TRAM1-202ENST00000518678 STAB2Q8WWQ8 2551 aa12.81□□□□□ -0.36
TRAM1-202ENST00000518678 SMIM9A6NGZ8 99 aa12.81□□□□□ -0.36
TRAM1-202ENST00000518678 MIFP14174 115 aa12.81□□□□□ -0.36
TRAM1-202ENST00000518678 Q6ZQT7 251 aa12.81□□□□□ -0.36
TRAM1-202ENST00000518678 BAGE2Q86Y30 109 aa12.81□□□□□ -0.36
TRAM1-202ENST00000518678 TMEM183AQ8IXX5 376 aa12.81□□□□□ -0.36
TRAM1-202ENST00000518678 U3KQK5 164 aa12.81□□□□□ -0.36
TRAM1-202ENST00000518678 GCGP01275 180 aa12.8□□□□□ -0.36
TRAM1-202ENST00000518678 SRP19P09132 144 aaKnown RBP12.8□□□□□ -0.36
TRAM1-202ENST00000518678 ZNF80P51504 273 aaPredicted RBP12.8□□□□□ -0.36
TRAM1-202ENST00000518678 PEA15Q15121 130 aa12.8□□□□□ -0.36
TRAM1-202ENST00000518678 Q8NAQ8 132 aa12.8□□□□□ -0.36
TRAM1-202ENST00000518678 PYGO2Q9BRQ0 406 aa12.8□□□□□ -0.36
TRAM1-202ENST00000518678 LINC00467Q9BRT7 94 aa12.8□□□□□ -0.36
TRAM1-202ENST00000518678 SMDT1Q9H4I9 107 aa12.8□□□□□ -0.36
TRAM1-202ENST00000518678 TRAV21A0A0B4J279 112 aa12.79□□□□□ -0.36
TRAM1-202ENST00000518678 RAB19A4D1S5 217 aa12.79□□□□□ -0.36
TRAM1-202ENST00000518678 ZNF705GA8MUZ8 300 aaPredicted RBP12.79□□□□□ -0.36
TRAM1-202ENST00000518678 SRSF3P84103 164 aaKnown RBP12.79□□□□□ -0.36
TRAM1-202ENST00000518678 RRN3P1Q2M238 152 aa12.79□□□□□ -0.36
TRAM1-202ENST00000518678 CENPWQ5EE01 88 aa12.79□□□□□ -0.36
TRAM1-202ENST00000518678 ZC2HC1AQ96GY0 325 aa12.79□□□□□ -0.36
TRAM1-202ENST00000518678 MLST8Q9BVC4 326 aa12.79□□□□□ -0.36
TRAM1-202ENST00000518678 IGHV4-28A0A0C4DH34 117 aa12.78□□□□□ -0.36
TRAM1-202ENST00000518678 GNG4P50150 75 aa12.78□□□□□ -0.36
TRAM1-202ENST00000518678 PARLQ9H300 379 aa12.78□□□□□ -0.36
TRAM1-202ENST00000518678 SACSQ9NZJ4 4579 aa12.78□□□□□ -0.36
TRAM1-202ENST00000518678 TRBV20OR9-2A0A075B6H5 130 aa12.77□□□□□ -0.37
TRAM1-202ENST00000518678 IGHV1OR15-1A0A075B7D0 117 aa12.77□□□□□ -0.37
TRAM1-202ENST00000518678 C9JQL5 133 aa12.77□□□□□ -0.37
TRAM1-202ENST00000518678 PRM2P04554 102 aa12.77□□□□□ -0.37
TRAM1-202ENST00000518678 PFN1P07737 140 aaKnown RBP12.77□□□□□ -0.37
TRAM1-202ENST00000518678 HTN1P15515 57 aa12.77□□□□□ -0.37
TRAM1-202ENST00000518678 CEBPGP53567 150 aa12.77□□□□□ -0.37
TRAM1-202ENST00000518678 EIF4E3Q8N5X7 224 aaKnown RBP12.77□□□□□ -0.37
TRAM1-202ENST00000518678 NHLRC2Q8NBF2 726 aa12.77□□□□□ -0.37
TRAM1-202ENST00000518678 SMIM12Q96EX1 92 aa12.77□□□□□ -0.37
TRAM1-202ENST00000518678 WWC2-AS2Q96NR7 200 aa12.77□□□□□ -0.37
TRAM1-202ENST00000518678 C11orf68Q9H3H3 251 aaKnown RBP12.77□□□□□ -0.37
TRAM1-202ENST00000518678 STARD9Q9P2P6 4700 aa12.77□□□□□ -0.37
TRAM1-202ENST00000518678 C9JCJ5 164 aa12.76□□□□□ -0.37
TRAM1-202ENST00000518678 IGLV2-8P01709 118 aa12.76□□□□□ -0.37
TRAM1-202ENST00000518678 AZU1P20160 251 aa12.76□□□□□ -0.37
TRAM1-202ENST00000518678 CRIP1P50238 77 aa12.76□□□□□ -0.37
TRAM1-202ENST00000518678 ZNF674Q2M3X9 581 aa12.76□□□□□ -0.37
TRAM1-202ENST00000518678 A0A0J9YWU9 116 aa12.75□□□□□ -0.37
TRAM1-202ENST00000518678 FABP5P3A8MUU1 101 aa12.75□□□□□ -0.37
TRAM1-202ENST00000518678 ANXA2RQ3ZCQ2 193 aa12.75□□□□□ -0.37
TRAM1-202ENST00000518678 MUC21Q5SSG8 566 aa12.75□□□□□ -0.37
TRAM1-202ENST00000518678 FAM162BQ5T6X4 162 aa12.75□□□□□ -0.37
TRAM1-202ENST00000518678 FAM159AQ6UWV7 190 aa12.75□□□□□ -0.37
TRAM1-202ENST00000518678 ZNF493Q6ZR52 646 aa12.75□□□□□ -0.37
TRAM1-202ENST00000518678 C16orf74Q96GX8 76 aa12.75□□□□□ -0.37
TRAM1-202ENST00000518678 RYR2Q92736 4967 aa12.74□□□□□ -0.37
TRAM1-202ENST00000518678 TMEM189A5PLL7 270 aa12.74□□□□□ -0.37
TRAM1-202ENST00000518678 CBY3A6NI87 242 aa12.74□□□□□ -0.37
TRAM1-202ENST00000518678 DEFB4AO15263 64 aa12.74□□□□□ -0.37
TRAM1-202ENST00000518678 SH2D1AO60880 128 aa12.74□□□□□ -0.37
TRAM1-202ENST00000518678 TDRG1Q3Y452 100 aa12.74□□□□□ -0.37
TRAM1-202ENST00000518678 RNASE8Q8TDE3 154 aaKnown RBP12.74□□□□□ -0.37
TRAM1-202ENST00000518678 TMEM263Q8WUH6 116 aaKnown RBP12.74□□□□□ -0.37
TRAM1-202ENST00000518678 SMIM7Q9BQ49 75 aa12.74□□□□□ -0.37
TRAM1-202ENST00000518678 C11orf21Q9P2W6 132 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms