RNA–Protein interactions for RNA: ENST00000499125.3

HMGN1P12-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 12, humanhuman

BASIC

Gene HMGN1P12, Length 195 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P12-201ENST00000499125 RPS3P23396 243 aaKnown RBP eCLIP0.22□□□□□ -2.37
HMGN1P12-201ENST00000499125 CAV3P56539 151 aa0.22□□□□□ -2.37
HMGN1P12-201ENST00000499125 DNAJB13P59910 316 aa0.22□□□□□ -2.37
HMGN1P12-201ENST00000499125 SAMD13Q5VXD3 122 aa0.22□□□□□ -2.37
HMGN1P12-201ENST00000499125 C10orf99Q6UWK7 81 aa0.22□□□□□ -2.37
HMGN1P12-201ENST00000499125 C3orf62Q6ZUJ4 267 aa0.22□□□□□ -2.37
HMGN1P12-201ENST00000499125 Q86TA4 180 aa0.22□□□□□ -2.37
HMGN1P12-201ENST00000499125 TMEM229BQ8NBD8 167 aa0.22□□□□□ -2.37
HMGN1P12-201ENST00000499125 NAT14Q8WUY8 206 aa0.22□□□□□ -2.37
HMGN1P12-201ENST00000499125 PLAC4Q8WY50 150 aa0.22□□□□□ -2.37
HMGN1P12-201ENST00000499125 C19orf12Q9NSK7 152 aa0.22□□□□□ -2.37
HMGN1P12-201ENST00000499125 PLAC8Q9NZF1 115 aa0.22□□□□□ -2.37
HMGN1P12-201ENST00000499125 TRAPPC2LQ9UL33 140 aa0.22□□□□□ -2.37
HMGN1P12-201ENST00000499125 KCPQ6ZWJ8 1503 aa0.22□□□□□ -2.37
HMGN1P12-201ENST00000499125 KIAA1549LQ6ZVL6 1849 aa0.22□□□□□ -2.37
HMGN1P12-201ENST00000499125 NAV2Q8IVL1 2488 aa0.22□□□□□ -2.37
HMGN1P12-201ENST00000499125 NINQ8N4C6 2090 aa0.22□□□□□ -2.38
HMGN1P12-201ENST00000499125 BDP1A6H8Y1 2624 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 CTTNBP2Q8WZ74 1663 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 DSPPQ9NZW4 1301 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 PRORSD1PA6NEY8 169 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 PGRMC1O00264 195 aaKnown RBP0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 IGF2P01344 180 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 PRH1P02810 166 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 RPL7P18124 248 aaKnown RBP0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 RPL22P35268 128 aaKnown RBP0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 ETV6P41212 452 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 LSM3P62310 102 aaKnown RBP0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 SNRPD3P62318 126 aaKnown RBP0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 QRFPP83859 136 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 KRTAP21-1Q3LI58 79 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 ASB16-AS1Q495Z4 193 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 TMEM128Q5BJH2 165 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 C6orf52Q5T4I8 152 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 XAF1Q6GPH4 301 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 SMIM15Q7Z3B0 74 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 DEFB132Q7Z7B7 95 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 OR5A2Q8NGI9 324 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 OR51A4Q8NGJ6 313 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 CCDC115Q96NT0 180 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 SELENOSQ9BQE4 189 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 CBLN4Q9NTU7 201 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 FKBP11Q9NYL4 201 aa0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 MRPL35Q9NZE8 188 aaKnown RBP0.21□□□□□ -2.38
HMGN1P12-201ENST00000499125 TANC2Q9HCD6 1990 aa0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 LOC107984156A0A0G2JMH3 177 aa0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 EDF1O60869 148 aaKnown RBP0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 HBDP02042 147 aa0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 SLC25A4P12235 298 aa0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 EVI2AP22794 236 aa0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 S100GP29377 79 aa0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 SPINK7P58062 85 aa0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 BLCAPP62952 87 aa0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 CSAG1Q6PB30 78 aa0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 ARL17AQ8IVW1 177 aa0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 TMEM35BQ8NCS4 154 aa0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 OR8J3Q8NGG0 315 aa0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 BRK1Q8WUW1 75 aa0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 SKA2Q8WVK7 121 aaPredicted RBP0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 SMR3AQ99954 134 aa0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 SMIM7Q9BQ49 75 aa0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 FAM103A1Q9BTL3 118 aaKnown RBP0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 ASH1LQ9NR48 2969 aaKnown RBP0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 WDR97A6NE52 1622 aa0.2□□□□□ -2.38
HMGN1P12-201ENST00000499125 MED23Q9ULK4 1368 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 CACNA1HO95180 2353 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 ABCA1O95477 2261 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 ABCA4P78363 2273 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 ANK1P16157 1881 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 FER1L6Q2WGJ9 1857 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 NBDYA0A0U1RRE5 68 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 TMEM30CPA0ZSE6 113 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 TMEM189A5PLL7 270 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 TSTD3H0UI37 97 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 J3KT08 172 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 M0QZK8 103 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 UQCRQO14949 82 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 GTF2A1P52655 376 aaPredicted RBP0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 RPS28P62857 69 aaKnown RBP0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 FXYD3Q14802 87 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 SPINK13Q1W4C9 94 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 GLYATL3Q5SZD4 288 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 DMAC1Q96GE9 116 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 NDUFAF1Q9Y375 327 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 OVOS2A0A0G2JMS6 1433 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 PTPRGP23470 1445 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 JMJD1CQ15652 2540 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 PIEZO1Q92508 2521 aa0.19□□□□□ -2.38
HMGN1P12-201ENST00000499125 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.18□□□□□ -2.38
HMGN1P12-201ENST00000499125 FRAS1Q86XX4 4008 aa0.18□□□□□ -2.38
HMGN1P12-201ENST00000499125 APCP25054 2843 aa0.18□□□□□ -2.38
HMGN1P12-201ENST00000499125 A0A0G2JMM0 328 aa0.18□□□□□ -2.38
HMGN1P12-201ENST00000499125 PNMA8CA0A1B0GUJ8 204 aa0.18□□□□□ -2.38
HMGN1P12-201ENST00000499125 HIGD1CA8MV81 97 aa0.18□□□□□ -2.38
HMGN1P12-201ENST00000499125 CDC42EP2O14613 210 aa0.18□□□□□ -2.38
HMGN1P12-201ENST00000499125 TPST1O60507 370 aa0.18□□□□□ -2.38
HMGN1P12-201ENST00000499125 LY6G6CO95867 125 aa0.18□□□□□ -2.38
HMGN1P12-201ENST00000499125 KRTAP2-3P0C7H8 128 aa0.18□□□□□ -2.38
HMGN1P12-201ENST00000499125 KDELR1P24390 212 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms