RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 SPINK4O60575 86 aa6.68□□□□□ -1.34
CD40-203ENST00000461171 GPX1P07203 203 aa6.68□□□□□ -1.34
CD40-203ENST00000461171 PET100P0DJ07 73 aa6.68□□□□□ -1.34
CD40-203ENST00000461171 ZNF138P52744 262 aa6.68□□□□□ -1.34
CD40-203ENST00000461171 DEFA1P59665 94 aa6.68□□□□□ -1.34
CD40-203ENST00000461171 DEFA3P59666 94 aa6.68□□□□□ -1.34
CD40-203ENST00000461171 UBE2L3P68036 154 aaKnown RBP6.68□□□□□ -1.34
CD40-203ENST00000461171 TNP2Q05952 138 aa6.68□□□□□ -1.34
CD40-203ENST00000461171 TMEM78Q5T7P6 136 aa6.68□□□□□ -1.34
CD40-203ENST00000461171 LYPD1Q8N2G4 141 aa6.68□□□□□ -1.34
CD40-203ENST00000461171 MBD2Q9UBB5 411 aa6.68□□□□□ -1.34
CD40-203ENST00000461171 KLF12Q9Y4X4 402 aa6.68□□□□□ -1.34
CD40-203ENST00000461171 IGHV1OR15-1A0A075B7D0 117 aa6.67□□□□□ -1.34
CD40-203ENST00000461171 TRGV1A0A0A0MS02 117 aa6.67□□□□□ -1.34
CD40-203ENST00000461171 RPL12P30050 165 aaKnown RBP6.67□□□□□ -1.34
CD40-203ENST00000461171 ZNF266Q14584 549 aa6.67□□□□□ -1.34
CD40-203ENST00000461171 ESRGQ1W209 222 aa6.67□□□□□ -1.34
CD40-203ENST00000461171 FFAR4Q5NUL3 377 aa6.67□□□□□ -1.34
CD40-203ENST00000461171 SMIM3Q9BZL3 60 aa6.67□□□□□ -1.34
CD40-203ENST00000461171 Q9H3A6 140 aa6.67□□□□□ -1.34
CD40-203ENST00000461171 Q9H8V8 135 aa6.67□□□□□ -1.34
CD40-203ENST00000461171 WFDC1Q9HC57 220 aa6.67□□□□□ -1.34
CD40-203ENST00000461171 TP53TG3Q9ULZ0 132 aa6.67□□□□□ -1.34
CD40-203ENST00000461171 MRPS16Q9Y3D3 137 aaKnown RBP6.67□□□□□ -1.34
CD40-203ENST00000461171 TRGV2A0A075B6R0 118 aa6.66□□□□□ -1.34
CD40-203ENST00000461171 A0A096LPF7 62 aa6.66□□□□□ -1.34
CD40-203ENST00000461171 A0A1W2PPQ1 181 aa6.66□□□□□ -1.34
CD40-203ENST00000461171 RGS13O14921 159 aa6.66□□□□□ -1.34
CD40-203ENST00000461171 RANP62826 216 aaKnown RBP6.66□□□□□ -1.34
CD40-203ENST00000461171 KHDC3LQ587J8 217 aa6.66□□□□□ -1.34
CD40-203ENST00000461171 TTC32Q5I0X7 151 aa6.66□□□□□ -1.34
CD40-203ENST00000461171 ST6GAL2Q96JF0 529 aa6.66□□□□□ -1.34
CD40-203ENST00000461171 HSPG2P98160 4391 aa6.65□□□□□ -1.34
CD40-203ENST00000461171 DIRC3C9JPN6 131 aa6.65□□□□□ -1.34
CD40-203ENST00000461171 EIF3GO75821 320 aaKnown RBP eCLIP6.65□□□□□ -1.34
CD40-203ENST00000461171 IFNA5P01569 189 aa6.65□□□□□ -1.34
CD40-203ENST00000461171 CSN1S1P47710 185 aa6.65□□□□□ -1.34
CD40-203ENST00000461171 TAS2R45P59539 299 aa6.65□□□□□ -1.34
CD40-203ENST00000461171 Q6AWC8 147 aa6.65□□□□□ -1.34
CD40-203ENST00000461171 SCGB1C1Q8TD33 95 aa6.65□□□□□ -1.34
CD40-203ENST00000461171 TMED6Q8WW62 240 aa6.65□□□□□ -1.34
CD40-203ENST00000461171 MRPL16Q9NX20 251 aaKnown RBP6.65□□□□□ -1.34
CD40-203ENST00000461171 LENEPQ9Y5L5 61 aa6.65□□□□□ -1.34
CD40-203ENST00000461171 BTF3P20290 206 aaKnown RBP6.64□□□□□ -1.35
CD40-203ENST00000461171 RAB2AP61019 212 aa6.64□□□□□ -1.35
CD40-203ENST00000461171 ZNF415Q09FC8 603 aa6.64□□□□□ -1.35
CD40-203ENST00000461171 TDRG1Q3Y452 100 aa6.64□□□□□ -1.35
CD40-203ENST00000461171 PQLC2Q6ZP29 291 aa6.64□□□□□ -1.35
CD40-203ENST00000461171 LINC00528Q8N1L1 170 aa6.64□□□□□ -1.35
CD40-203ENST00000461171 ARPC5LQ9BPX5 153 aa6.64□□□□□ -1.35
CD40-203ENST00000461171 OTORQ9NRC9 128 aa6.64□□□□□ -1.35
CD40-203ENST00000461171 ALG5Q9Y673 324 aa6.64□□□□□ -1.35
CD40-203ENST00000461171 DNAH5Q8TE73 4624 aa6.64□□□□□ -1.35
CD40-203ENST00000461171 CRYBA4P53673 196 aa6.63□□□□□ -1.35
CD40-203ENST00000461171 FHL2Q14192 279 aa6.63□□□□□ -1.35
CD40-203ENST00000461171 ACOT6Q3I5F7 207 aaPredicted RBP6.63□□□□□ -1.35
CD40-203ENST00000461171 MUC21Q5SSG8 566 aa6.63□□□□□ -1.35
CD40-203ENST00000461171 ARL6IP6Q8N6S5 226 aa6.63□□□□□ -1.35
CD40-203ENST00000461171 OR2G3Q8NGZ4 309 aa6.63□□□□□ -1.35
CD40-203ENST00000461171 MDFICQ9P1T7 246 aa6.63□□□□□ -1.35
CD40-203ENST00000461171 APOBP04114 4563 aaKnown RBP6.62□□□□□ -1.35
CD40-203ENST00000461171 C16orf90A8MZG2 172 aa6.62□□□□□ -1.35
CD40-203ENST00000461171 PAX4O43316 350 aa6.62□□□□□ -1.35
CD40-203ENST00000461171 CDK2AP2O75956 126 aa6.62□□□□□ -1.35
CD40-203ENST00000461171 PTTG1O95997 202 aa6.62□□□□□ -1.35
CD40-203ENST00000461171 IGHV3-53P01767 116 aa6.62□□□□□ -1.35
CD40-203ENST00000461171 LCE3BQ5TA77 95 aa6.62□□□□□ -1.35
CD40-203ENST00000461171 Q6ZRN7 208 aaPredicted RBP6.62□□□□□ -1.35
CD40-203ENST00000461171 RASL10AQ92737 203 aa6.62□□□□□ -1.35
CD40-203ENST00000461171 TVP23CQ96ET8 276 aa6.62□□□□□ -1.35
CD40-203ENST00000461171 HYLS1Q96M11 299 aa6.62□□□□□ -1.35
CD40-203ENST00000461171 AQP10Q96PS8 301 aa6.62□□□□□ -1.35
CD40-203ENST00000461171 BATF3Q9NR55 127 aa6.62□□□□□ -1.35
CD40-203ENST00000461171 PRO0255Q9UI72 69 aa6.62□□□□□ -1.35
CD40-203ENST00000461171 ICOSQ9Y6W8 199 aa6.62□□□□□ -1.35
CD40-203ENST00000461171 TRGV11A0A075B6L2 103 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 TRAV8-1A0A0A6YYK1 113 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 PGPA6NDG6 321 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 NXPH4O95158 308 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 STAG3L2P0CL84 134 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 STAG3L3P0CL85 134 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 ARL14EPLP0DKL9 152 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 SLAQ13239 276 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 TMEM183BQ1AE95 376 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 GOLT1AQ6ZVE7 132 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 IQCF2Q8IXL9 164 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 TMEM183AQ8IXX5 376 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 OR10G4Q8NGN3 311 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 OR10G9Q8NGN4 311 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 OR10G7Q8NGN6 311 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 CMTM2Q8TAZ6 248 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 C8orf49Q96NF6 230 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 SPXQ9BT56 116 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 PSMG3Q9BT73 122 aaPredicted RBP6.61□□□□□ -1.35
CD40-203ENST00000461171 HHLA3Q9XRX5 114 aa6.61□□□□□ -1.35
CD40-203ENST00000461171 IGHV3-16A0A0C4DH30 117 aa6.6□□□□□ -1.35
CD40-203ENST00000461171 A0A1W2PPV4 95 aa6.6□□□□□ -1.35
CD40-203ENST00000461171 SIVA1O15304 175 aa6.6□□□□□ -1.35
CD40-203ENST00000461171 HMGB3O15347 200 aaKnown RBP6.6□□□□□ -1.35
CD40-203ENST00000461171 SFTA3P0C7M3 94 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms