RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 BRD3OSQ6XYD6 125 aa7.23□□□□□ -1.25
NDE1-201ENST00000396354 GTSCR1Q86UQ5 136 aa7.23□□□□□ -1.25
NDE1-201ENST00000396354 TMEM160Q9NX00 188 aa7.23□□□□□ -1.25
NDE1-201ENST00000396354 H3BRN7 92 aa7.22□□□□□ -1.25
NDE1-201ENST00000396354 LY6EQ16553 131 aa7.22□□□□□ -1.25
NDE1-201ENST00000396354 FANCD2OSQ96PS1 177 aa7.22□□□□□ -1.25
NDE1-201ENST00000396354 GAGE10A6NGK3 116 aa7.22□□□□□ -1.25
NDE1-201ENST00000396354 PVRIGQ6DKI7 326 aa7.22□□□□□ -1.25
NDE1-201ENST00000396354 CFHR4Q92496 578 aa7.22□□□□□ -1.25
NDE1-201ENST00000396354 NDFIP1Q9BT67 221 aa7.22□□□□□ -1.25
NDE1-201ENST00000396354 SCRT2Q9NQ03 307 aa7.22□□□□□ -1.25
NDE1-201ENST00000396354 AGRNO00468 2067 aa7.22□□□□□ -1.25
NDE1-201ENST00000396354 GAGE12BA1L429 117 aa7.22□□□□□ -1.25
NDE1-201ENST00000396354 M0R381 172 aa7.22□□□□□ -1.25
NDE1-201ENST00000396354 TRGV3P03979 118 aa7.22□□□□□ -1.25
NDE1-201ENST00000396354 C12orf54Q6X4T0 127 aa7.22□□□□□ -1.25
NDE1-201ENST00000396354 TNFRSF14Q92956 283 aa7.22□□□□□ -1.25
NDE1-201ENST00000396354 FOXC2Q99958 501 aa7.22□□□□□ -1.25
NDE1-201ENST00000396354 ZNF492Q9P255 531 aa7.22□□□□□ -1.25
NDE1-201ENST00000396354 SOX21Q9Y651 276 aaPredicted RBP7.22□□□□□ -1.25
NDE1-201ENST00000396354 NOTCH2Q04721 2471 aa7.21□□□□□ -1.25
NDE1-201ENST00000396354 MTORP42345 2549 aa7.21□□□□□ -1.25
NDE1-201ENST00000396354 GHRHP01286 108 aa7.21□□□□□ -1.26
NDE1-201ENST00000396354 IGF1P05019 195 aa7.21□□□□□ -1.26
NDE1-201ENST00000396354 RPL24P83731 157 aaKnown RBP7.21□□□□□ -1.26
NDE1-201ENST00000396354 IFI27L1Q96BM0 104 aa7.21□□□□□ -1.26
NDE1-201ENST00000396354 CLUHP3Q96NS8 147 aa7.21□□□□□ -1.26
NDE1-201ENST00000396354 PRR25Q96S07 402 aa7.21□□□□□ -1.26
NDE1-201ENST00000396354 RAB1BQ9H0U4 201 aa7.21□□□□□ -1.26
NDE1-201ENST00000396354 HELZ2Q9BYK8 2649 aaKnown RBP7.21□□□□□ -1.26
NDE1-201ENST00000396354 A0A096LNJ9 63 aa7.21□□□□□ -1.26
NDE1-201ENST00000396354 EMP1P54849 157 aa7.21□□□□□ -1.26
NDE1-201ENST00000396354 TMEM97Q5BJF2 176 aa7.21□□□□□ -1.26
NDE1-201ENST00000396354 PET117Q6UWS5 81 aa7.21□□□□□ -1.26
NDE1-201ENST00000396354 CST9LQ9H4G1 147 aa7.21□□□□□ -1.26
NDE1-201ENST00000396354 NF1P21359 2839 aa7.21□□□□□ -1.26
NDE1-201ENST00000396354 IGHV2-70DA0A0C4DH43 119 aa7.2□□□□□ -1.26
NDE1-201ENST00000396354 IGKV3-20P01619 116 aa7.2□□□□□ -1.26
NDE1-201ENST00000396354 CEACAM3P40198 252 aa7.2□□□□□ -1.26
NDE1-201ENST00000396354 EFNA4P52798 201 aa7.2□□□□□ -1.26
NDE1-201ENST00000396354 FAM104BQ5XKR9 115 aa7.2□□□□□ -1.26
NDE1-201ENST00000396354 ITLN2Q8WWU7 325 aaPredicted RBP7.2□□□□□ -1.26
NDE1-201ENST00000396354 TMEM238C9JI98 176 aa7.2□□□□□ -1.26
NDE1-201ENST00000396354 ATP6V0E1O15342 81 aa7.2□□□□□ -1.26
NDE1-201ENST00000396354 NDUFA3O95167 84 aa7.2□□□□□ -1.26
NDE1-201ENST00000396354 NEGR1Q7Z3B1 354 aa7.2□□□□□ -1.26
NDE1-201ENST00000396354 UBR5O95071 2799 aaPredicted RBP7.2□□□□□ -1.26
NDE1-201ENST00000396354 IGKV2D-26A0A0A0MRZ7 120 aa7.2□□□□□ -1.26
NDE1-201ENST00000396354 ODF3BA8MYP8 253 aa7.2□□□□□ -1.26
NDE1-201ENST00000396354 H3BVH4 76 aa7.2□□□□□ -1.26
NDE1-201ENST00000396354 HBDP02042 147 aa7.2□□□□□ -1.26
NDE1-201ENST00000396354 CTSGP08311 255 aa7.2□□□□□ -1.26
NDE1-201ENST00000396354 RPL7P18124 248 aaKnown RBP7.2□□□□□ -1.26
NDE1-201ENST00000396354 C2orf91Q6ZV80 131 aa7.2□□□□□ -1.26
NDE1-201ENST00000396354 NIPBLQ6KC79 2804 aaeCLIP7.19□□□□□ -1.26
NDE1-201ENST00000396354 F6UB75 175 aa7.19□□□□□ -1.26
NDE1-201ENST00000396354 CT83Q5H943 113 aa7.19□□□□□ -1.26
NDE1-201ENST00000396354 SPANXN1Q5VSR9 72 aa7.19□□□□□ -1.26
NDE1-201ENST00000396354 MEGF9Q9H1U4 602 aa7.19□□□□□ -1.26
NDE1-201ENST00000396354 FASNP49327 2511 aaKnown RBP7.19□□□□□ -1.26
NDE1-201ENST00000396354 A1L4Q6 167 aa7.19□□□□□ -1.26
NDE1-201ENST00000396354 GOSR1O95249 250 aa7.19□□□□□ -1.26
NDE1-201ENST00000396354 HIST1H1AQ02539 215 aaPredicted RBP7.19□□□□□ -1.26
NDE1-201ENST00000396354 KIR3DS1Q14943 382 aa7.19□□□□□ -1.26
NDE1-201ENST00000396354 TMEM158Q8WZ71 300 aa7.19□□□□□ -1.26
NDE1-201ENST00000396354 AJUBAQ96IF1 538 aa7.19□□□□□ -1.26
NDE1-201ENST00000396354 GFRA4Q9GZZ7 299 aa7.19□□□□□ -1.26
NDE1-201ENST00000396354 SMAD5-AS1Q9Y6J3 95 aa7.19□□□□□ -1.26
NDE1-201ENST00000396354 MXRA5Q9NR99 2828 aa7.19□□□□□ -1.26
NDE1-201ENST00000396354 AKAP9Q99996 3911 aa7.19□□□□□ -1.26
NDE1-201ENST00000396354 NPIPB6E9PJ23 425 aa7.18□□□□□ -1.26
NDE1-201ENST00000396354 F8W735 103 aaPredicted RBP7.18□□□□□ -1.26
NDE1-201ENST00000396354 MGPP08493 103 aa7.18□□□□□ -1.26
NDE1-201ENST00000396354 COX8AP10176 69 aa7.18□□□□□ -1.26
NDE1-201ENST00000396354 LINC01545Q5VT33 79 aa7.18□□□□□ -1.26
NDE1-201ENST00000396354 SMIM15Q7Z3B0 74 aa7.18□□□□□ -1.26
NDE1-201ENST00000396354 DTX2Q86UW9 622 aa7.18□□□□□ -1.26
NDE1-201ENST00000396354 DEFB125Q8N687 156 aa7.18□□□□□ -1.26
NDE1-201ENST00000396354 OR11H6Q8NGC7 330 aa7.18□□□□□ -1.26
NDE1-201ENST00000396354 JMJD8Q96S16 334 aa7.18□□□□□ -1.26
NDE1-201ENST00000396354 NHP2Q9NX24 153 aaKnown RBP7.18□□□□□ -1.26
NDE1-201ENST00000396354 EIF4EBP3O60516 100 aaPredicted RBP7.18□□□□□ -1.26
NDE1-201ENST00000396354 SAA4P35542 130 aa7.18□□□□□ -1.26
NDE1-201ENST00000396354 OCIAD2Q56VL3 154 aa7.18□□□□□ -1.26
NDE1-201ENST00000396354 OR2K2Q8NGT1 345 aa7.18□□□□□ -1.26
NDE1-201ENST00000396354 IGLV11-55A0A075B6I3 123 aa7.18□□□□□ -1.26
NDE1-201ENST00000396354 TRAV40A0A0B4J280 105 aa7.18□□□□□ -1.26
NDE1-201ENST00000396354 HTN1P15515 57 aa7.18□□□□□ -1.26
NDE1-201ENST00000396354 HOXB4P17483 251 aaPredicted RBP7.18□□□□□ -1.26
NDE1-201ENST00000396354 PLP1P60201 277 aa7.18□□□□□ -1.26
NDE1-201ENST00000396354 PAX2Q02962 417 aa7.18□□□□□ -1.26
NDE1-201ENST00000396354 TMEM14CQ9P0S9 112 aa7.18□□□□□ -1.26
NDE1-201ENST00000396354 IGHV7-81A0A0B4J1V7 117 aa7.17□□□□□ -1.26
NDE1-201ENST00000396354 S100A4P26447 101 aaKnown RBP7.17□□□□□ -1.26
NDE1-201ENST00000396354 Q5PR19 223 aa7.17□□□□□ -1.26
NDE1-201ENST00000396354 ZC2HC1BQ5TFG8 222 aa7.17□□□□□ -1.26
NDE1-201ENST00000396354 BPESC1Q9GZL8 116 aa7.17□□□□□ -1.26
NDE1-201ENST00000396354 MAP1LC3AQ9H492 121 aa7.17□□□□□ -1.26
NDE1-201ENST00000396354 TNFRSF6BO95407 300 aa7.17□□□□□ -1.26
NDE1-201ENST00000396354 TGFAP01135 160 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms