RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 CD5LO43866 347 aa15.08■□□□□ 0
PCF11-203ENST00000530304 CACNG7P62955 275 aa15.08■□□□□ 0
PCF11-203ENST00000530304 ERCC8Q13216 396 aa15.08■□□□□ 0
PCF11-203ENST00000530304 DPF1Q92782 380 aa15.08■□□□□ 0
PCF11-203ENST00000530304 FGF6P10767 208 aa15.07■□□□□ 0
PCF11-203ENST00000530304 S100A7P31151 101 aa15.07■□□□□ 0
PCF11-203ENST00000530304 SRSF2Q01130 221 aaKnown RBP15.07■□□□□ 0
PCF11-203ENST00000530304 ZNF502Q8TBZ5 544 aa15.07■□□□□ 0
PCF11-203ENST00000530304 WNK2Q9Y3S1 2297 aa15.07■□□□□ 0
PCF11-203ENST00000530304 ASH1LQ9NR48 2969 aaKnown RBP15.07■□□□□ 0
PCF11-203ENST00000530304 FABP5P3A8MUU1 101 aa15.07■□□□□ 0
PCF11-203ENST00000530304 PRAC2D3DTV9 90 aa15.07■□□□□ 0
PCF11-203ENST00000530304 CLEC3BP05452 202 aa15.07■□□□□ 0
PCF11-203ENST00000530304 ECSCRQ19T08 205 aa15.07■□□□□ 0
PCF11-203ENST00000530304 PSMG3-AS1Q96PY0 264 aa15.07■□□□□ 0
PCF11-203ENST00000530304 SIRPDQ9H106 197 aa15.07■□□□□ 0
PCF11-203ENST00000530304 RNF185Q96GF1 192 aa15.06■□□□□ 0
PCF11-203ENST00000530304 ZFAND3Q9H8U3 227 aa15.06■□□□□ 0
PCF11-203ENST00000530304 BUB3O43684 328 aa15.06■□□□□ 0
PCF11-203ENST00000530304 PRSS57Q6UWY2 283 aa15.06■□□□□ 0
PCF11-203ENST00000530304 OR1N2Q8NGR9 330 aa15.06■□□□□ 0
PCF11-203ENST00000530304 FAM110DQ8TAY7 271 aaPredicted RBP15.06■□□□□ 0
PCF11-203ENST00000530304 IFI27L1Q96BM0 104 aa15.06■□□□□ 0
PCF11-203ENST00000530304 NDUFS7O75251 213 aa15.05■□□□□ 0
PCF11-203ENST00000530304 AMMECR1LQ6DCA0 310 aa15.05■□□□□ 0
PCF11-203ENST00000530304 RNF182Q8N6D2 247 aa15.05■□□□□ 0
PCF11-203ENST00000530304 CNFNQ9BYD5 112 aa15.05■□□□□ 0
PCF11-203ENST00000530304 NBASA2RRP1 2371 aa15.05■□□□□ -0
PCF11-203ENST00000530304 ATP6V0E1O15342 81 aa15.04■□□□□ -0
PCF11-203ENST00000530304 TCTAP57738 103 aa15.04■□□□□ -0
PCF11-203ENST00000530304 RBX1P62877 108 aa15.04■□□□□ -0
PCF11-203ENST00000530304 TMEM97Q5BJF2 176 aa15.04■□□□□ -0
PCF11-203ENST00000530304 DTX2Q86UW9 622 aa15.04■□□□□ -0
PCF11-203ENST00000530304 IGHV3-66A0A0C4DH42 116 aa15.04■□□□□ -0
PCF11-203ENST00000530304 GAS8-AS1O95177 125 aa15.04■□□□□ -0
PCF11-203ENST00000530304 KLRB1Q12918 225 aa15.04■□□□□ -0
PCF11-203ENST00000530304 AJUBAQ96IF1 538 aa15.04■□□□□ -0
PCF11-203ENST00000530304 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.03■□□□□ -0
PCF11-203ENST00000530304 RAB9AP51151 201 aa15.03■□□□□ -0
PCF11-203ENST00000530304 IL17RELQ6ZVW7 336 aa15.03■□□□□ -0
PCF11-203ENST00000530304 WFDC3Q8IUB2 231 aa15.03■□□□□ -0
PCF11-203ENST00000530304 BOD1L2Q8IYS8 172 aa15.03■□□□□ -0
PCF11-203ENST00000530304 A0A1W2PPR1 153 aa15.02■□□□□ -0
PCF11-203ENST00000530304 GOSR1O95249 250 aa15.02■□□□□ -0
PCF11-203ENST00000530304 PPIFP30405 207 aaKnown RBP15.02■□□□□ -0
PCF11-203ENST00000530304 LINC01559Q495D7 138 aa15.02■□□□□ -0
PCF11-203ENST00000530304 MAP1LC3AQ9H492 121 aa15.02■□□□□ -0
PCF11-203ENST00000530304 MED13LQ71F56 2210 aa15.02■□□□□ -0
PCF11-203ENST00000530304 CLPSL1A2RUU4 121 aa15.02□□□□□ -0.01
PCF11-203ENST00000530304 PPBPP02775 128 aa15.02□□□□□ -0.01
PCF11-203ENST00000530304 UBE2E1P51965 193 aa15.02□□□□□ -0.01
PCF11-203ENST00000530304 CLEC19AQ6UXS0 136 aa15.02□□□□□ -0.01
PCF11-203ENST00000530304 IGHV3OR16-13A0A075B7E8 117 aa15.01□□□□□ -0.01
PCF11-203ENST00000530304 IGHV3-74A0A0B4J1X5 117 aa15.01□□□□□ -0.01
PCF11-203ENST00000530304 RBAKDNA6NC62 111 aa15.01□□□□□ -0.01
PCF11-203ENST00000530304 C7orf71A4D174 169 aa15.01□□□□□ -0.01
PCF11-203ENST00000530304 G3V318 75 aa15.01□□□□□ -0.01
PCF11-203ENST00000530304 SEC11AP67812 179 aa15.01□□□□□ -0.01
PCF11-203ENST00000530304 KLK9Q2XQG4 91 aa15.01□□□□□ -0.01
PCF11-203ENST00000530304 CCDC140Q96MF4 163 aa15.01□□□□□ -0.01
PCF11-203ENST00000530304 NPFFR1Q9GZQ6 430 aa15.01□□□□□ -0.01
PCF11-203ENST00000530304 KLK9Q9UKQ9 250 aa15.01□□□□□ -0.01
PCF11-203ENST00000530304 TRAV8-6A0A0B4J262 113 aa15□□□□□ -0.01
PCF11-203ENST00000530304 LINC01548A6NM66 108 aa15□□□□□ -0.01
PCF11-203ENST00000530304 C18orf15Q96N68 181 aa15□□□□□ -0.01
PCF11-203ENST00000530304 DKK2Q9UBU2 259 aa15□□□□□ -0.01
PCF11-203ENST00000530304 ZFHX3Q15911 3703 aa15□□□□□ -0.01
PCF11-203ENST00000530304 SAA4P35542 130 aa15□□□□□ -0.01
PCF11-203ENST00000530304 SLC50A1Q9BRV3 221 aa15□□□□□ -0.01
PCF11-203ENST00000530304 PEF1Q9UBV8 284 aaKnown RBP15□□□□□ -0.01
PCF11-203ENST00000530304 RAXQ9Y2V3 346 aa15□□□□□ -0.01
PCF11-203ENST00000530304 LINC01546A6NGU7 62 aa14.99□□□□□ -0.01
PCF11-203ENST00000530304 SMAD7O15105 426 aaKnown RBP14.99□□□□□ -0.01
PCF11-203ENST00000530304 TNFRSF6BO95407 300 aa14.99□□□□□ -0.01
PCF11-203ENST00000530304 EVI2AP22794 236 aa14.99□□□□□ -0.01
PCF11-203ENST00000530304 IGKV3D-20A0A0C4DH25 116 aa14.99□□□□□ -0.01
PCF11-203ENST00000530304 LEPP41159 167 aa14.99□□□□□ -0.01
PCF11-203ENST00000530304 UQCRFS1P47985 274 aa14.99□□□□□ -0.01
PCF11-203ENST00000530304 AGPAT4-IT1Q9H0P7 198 aa14.99□□□□□ -0.01
PCF11-203ENST00000530304 IGHV3-49A0A0A0MS15 119 aa14.98□□□□□ -0.01
PCF11-203ENST00000530304 C11orf21Q9P2W6 132 aa14.98□□□□□ -0.01
PCF11-203ENST00000530304 A1L4Q6 167 aa14.97□□□□□ -0.01
PCF11-203ENST00000530304 GATA1P15976 413 aaPredicted RBP14.97□□□□□ -0.01
PCF11-203ENST00000530304 TRAV8-2A0A0B4J237 113 aa14.97□□□□□ -0.01
PCF11-203ENST00000530304 FCER1GP30273 86 aa14.97□□□□□ -0.01
PCF11-203ENST00000530304 NMUP48645 174 aa14.97□□□□□ -0.01
PCF11-203ENST00000530304 PCP2Q8IVA1 136 aa14.97□□□□□ -0.01
PCF11-203ENST00000530304 OR9G4Q8NGQ1 327 aa14.97□□□□□ -0.01
PCF11-203ENST00000530304 NXT2Q9NPJ8 142 aaKnown RBP14.97□□□□□ -0.01
PCF11-203ENST00000530304 ZNF207O43670 478 aaKnown RBP14.96□□□□□ -0.01
PCF11-203ENST00000530304 EEF1AKMT3Q96AZ1 226 aa14.96□□□□□ -0.01
PCF11-203ENST00000530304 SIVA1O15304 175 aa14.96□□□□□ -0.01
PCF11-203ENST00000530304 ATRXP46100 2492 aa14.96□□□□□ -0.02
PCF11-203ENST00000530304 CDKN1BP46527 198 aa14.96□□□□□ -0.02
PCF11-203ENST00000530304 UCNP55089 124 aa14.96□□□□□ -0.02
PCF11-203ENST00000530304 ADAMTSL5Q6ZMM2 481 aa14.96□□□□□ -0.02
PCF11-203ENST00000530304 CENPVL3A0A0U1RRI6 287 aa14.95□□□□□ -0.02
PCF11-203ENST00000530304 TMEM78Q5T7P6 136 aa14.95□□□□□ -0.02
PCF11-203ENST00000530304 METTL26Q96S19 204 aa14.95□□□□□ -0.02
PCF11-203ENST00000530304 CST9LQ9H4G1 147 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms