RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 TMEM30BQ3MIR4 351 aa7.28□□□□□ -1.24
NDE1-201ENST00000396354 TMEM219Q86XT9 240 aa7.28□□□□□ -1.24
NDE1-201ENST00000396354 DYNAPQ8N1N2 210 aa7.28□□□□□ -1.24
NDE1-201ENST00000396354 PRELID3AQ96N28 172 aa7.28□□□□□ -1.24
NDE1-201ENST00000396354 ABCA2Q9BZC7 2435 aa7.28□□□□□ -1.24
NDE1-201ENST00000396354 C19orf71A6NCJ1 209 aa7.27□□□□□ -1.24
NDE1-201ENST00000396354 SH2D1AO60880 128 aa7.27□□□□□ -1.24
NDE1-201ENST00000396354 FCER1GP30273 86 aa7.27□□□□□ -1.24
NDE1-201ENST00000396354 RIGQ13278 110 aa7.27□□□□□ -1.24
NDE1-201ENST00000396354 UBE2V1Q13404 147 aa7.27□□□□□ -1.24
NDE1-201ENST00000396354 LCNL1Q6ZST4 164 aa7.27□□□□□ -1.24
NDE1-201ENST00000396354 OR4A5Q8NH83 315 aa7.27□□□□□ -1.24
NDE1-201ENST00000396354 AP1S3Q96PC3 154 aa7.27□□□□□ -1.24
NDE1-201ENST00000396354 NACAE9PAV3 2078 aa7.27□□□□□ -1.25
NDE1-201ENST00000396354 G3V318 75 aa7.27□□□□□ -1.25
NDE1-201ENST00000396354 NBR2O15453 112 aa7.27□□□□□ -1.25
NDE1-201ENST00000396354 SIGLEC15Q6ZMC9 328 aa7.27□□□□□ -1.25
NDE1-201ENST00000396354 NEU4Q8WWR8 484 aaPredicted RBP7.27□□□□□ -1.25
NDE1-201ENST00000396354 LOC105371242A0A075B767 164 aa7.27□□□□□ -1.25
NDE1-201ENST00000396354 CRYGBP07316 175 aa7.27□□□□□ -1.25
NDE1-201ENST00000396354 PRSS1P07477 247 aa7.27□□□□□ -1.25
NDE1-201ENST00000396354 ZNF80P51504 273 aaPredicted RBP7.27□□□□□ -1.25
NDE1-201ENST00000396354 C11orf71Q6IPW1 123 aa7.27□□□□□ -1.25
NDE1-201ENST00000396354 PCP2Q8IVA1 136 aa7.27□□□□□ -1.25
NDE1-201ENST00000396354 C8orf31Q8N9H6 132 aa7.27□□□□□ -1.25
NDE1-201ENST00000396354 WIPF2Q8TF74 440 aaPredicted RBP7.27□□□□□ -1.25
NDE1-201ENST00000396354 HIF1ANQ9NWT6 349 aa7.27□□□□□ -1.25
NDE1-201ENST00000396354 C1RLQ9NZP8 487 aa7.27□□□□□ -1.25
NDE1-201ENST00000396354 C7orf71A4D174 169 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 PRAC2D3DTV9 90 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 ATP5IP56385 69 aaPredicted RBP7.26□□□□□ -1.25
NDE1-201ENST00000396354 ATP5L2Q7Z4Y8 100 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 MTURNQ8N3F0 131 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 PRSS22Q9GZN4 317 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 SIGLEC8Q9NYZ4 499 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 DPM3Q9P2X0 92 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 DKK2Q9UBU2 259 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 HSPB8Q9UJY1 196 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 ZNF469Q96JG9 3925 aaPredicted RBP7.26□□□□□ -1.25
NDE1-201ENST00000396354 TRAV8-6A0A0B4J262 113 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 H3BUT2 72 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 NPYP01303 97 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 CRYGCP07315 174 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 EGR2P11161 476 aaPredicted RBP7.26□□□□□ -1.25
NDE1-201ENST00000396354 RIPPLY3P57055 190 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 RHOGP84095 191 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 PSG3Q16557 428 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 BVES-AS1Q5T3Y7 98 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 SFTA2Q6UW10 78 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 OR10AG1Q8NH19 301 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 GLMPQ8WWB7 406 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 SHANK2-AS3Q9BTD1 123 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 UBTD1Q9HAC8 227 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 C21orf62Q9NYP8 219 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 KLF12Q9Y4X4 402 aa7.26□□□□□ -1.25
NDE1-201ENST00000396354 LINC01548A6NM66 108 aa7.25□□□□□ -1.25
NDE1-201ENST00000396354 PSG9Q00887 426 aa7.25□□□□□ -1.25
NDE1-201ENST00000396354 KLF5Q13887 457 aaPredicted RBP7.25□□□□□ -1.25
NDE1-201ENST00000396354 CLEC19AQ6UXS0 136 aa7.25□□□□□ -1.25
NDE1-201ENST00000396354 ZNF414Q96IQ9 312 aa7.25□□□□□ -1.25
NDE1-201ENST00000396354 LY6LH3BQJ8 138 aa7.25□□□□□ -1.25
NDE1-201ENST00000396354 CIDEAO60543 219 aa7.25□□□□□ -1.25
NDE1-201ENST00000396354 CLEC3BP05452 202 aa7.25□□□□□ -1.25
NDE1-201ENST00000396354 ARPC1AQ92747 370 aa7.25□□□□□ -1.25
NDE1-201ENST00000396354 MRPS16Q9Y3D3 137 aaKnown RBP7.25□□□□□ -1.25
NDE1-201ENST00000396354 JMJD1CQ15652 2540 aa7.25□□□□□ -1.25
NDE1-201ENST00000396354 DOPEY1Q5JWR5 2465 aa7.25□□□□□ -1.25
NDE1-201ENST00000396354 C19orf84I3L1E1 186 aa7.25□□□□□ -1.25
NDE1-201ENST00000396354 TAX1BP3O14907 124 aa7.25□□□□□ -1.25
NDE1-201ENST00000396354 SRD5A1P18405 259 aa7.25□□□□□ -1.25
NDE1-201ENST00000396354 GCSHP23434 173 aa7.25□□□□□ -1.25
NDE1-201ENST00000396354 CDKN1BP46527 198 aa7.25□□□□□ -1.25
NDE1-201ENST00000396354 FAM71F2Q6NXP2 309 aa7.25□□□□□ -1.25
NDE1-201ENST00000396354 ZNF843Q8N446 348 aa7.25□□□□□ -1.25
NDE1-201ENST00000396354 SAP30O75446 220 aa7.24□□□□□ -1.25
NDE1-201ENST00000396354 MRPL52Q86TS9 123 aaKnown RBP7.24□□□□□ -1.25
NDE1-201ENST00000396354 ZNF747Q9BV97 191 aa7.24□□□□□ -1.25
NDE1-201ENST00000396354 NAV2Q8IVL1 2488 aa7.24□□□□□ -1.25
NDE1-201ENST00000396354 K7ERJ3 54 aa7.24□□□□□ -1.25
NDE1-201ENST00000396354 MFAP4P55083 255 aa7.24□□□□□ -1.25
NDE1-201ENST00000396354 C15orf32Q32M92 178 aa7.24□□□□□ -1.25
NDE1-201ENST00000396354 MRPL51Q4U2R6 128 aaKnown RBP7.24□□□□□ -1.25
NDE1-201ENST00000396354 RASL11AQ6T310 242 aa7.24□□□□□ -1.25
NDE1-201ENST00000396354 INS-IGF2F8WCM5 200 aa7.23□□□□□ -1.25
NDE1-201ENST00000396354 ZFP36P26651 326 aaKnown RBP7.23□□□□□ -1.25
NDE1-201ENST00000396354 IL17RELQ6ZVW7 336 aa7.23□□□□□ -1.25
NDE1-201ENST00000396354 VMO1Q7Z5L0 202 aa7.23□□□□□ -1.25
NDE1-201ENST00000396354 LY6G5BQ8NDX9 201 aa7.23□□□□□ -1.25
NDE1-201ENST00000396354 ORAOV1Q8WV07 137 aa7.23□□□□□ -1.25
NDE1-201ENST00000396354 TIMD4Q96H15 378 aa7.23□□□□□ -1.25
NDE1-201ENST00000396354 RABAC1Q9UI14 185 aa7.23□□□□□ -1.25
NDE1-201ENST00000396354 IGHV3-11P01762 117 aa7.23□□□□□ -1.25
NDE1-201ENST00000396354 C5orf64Q2M2E5 130 aa7.23□□□□□ -1.25
NDE1-201ENST00000396354 FAM162BQ5T6X4 162 aa7.23□□□□□ -1.25
NDE1-201ENST00000396354 ORMDL3Q8N138 153 aa7.23□□□□□ -1.25
NDE1-201ENST00000396354 FER1L6-AS1Q8NA97 138 aa7.23□□□□□ -1.25
NDE1-201ENST00000396354 CHCHD1Q96BP2 118 aaKnown RBP7.23□□□□□ -1.25
NDE1-201ENST00000396354 ST20Q9HBF5 79 aa7.23□□□□□ -1.25
NDE1-201ENST00000396354 FAM231BA6NCW3 169 aa7.23□□□□□ -1.25
NDE1-201ENST00000396354 LEPP41159 167 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms