RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 LINC00322Q6ZN03 302 aaPredicted RBP13.09□□□□□ -0.31
TRAM1-202ENST00000518678 RPUSD4Q96CM3 377 aaKnown RBP13.09□□□□□ -0.31
TRAM1-202ENST00000518678 Q9H3A6 140 aa13.09□□□□□ -0.31
TRAM1-202ENST00000518678 A0A0J9YX75 114 aa13.08□□□□□ -0.32
TRAM1-202ENST00000518678 ZNF705FA8MVS1 300 aaPredicted RBP13.08□□□□□ -0.32
TRAM1-202ENST00000518678 F6UB75 175 aa13.08□□□□□ -0.32
TRAM1-202ENST00000518678 FRMD6-AS1P0C7T7 363 aa13.08□□□□□ -0.32
TRAM1-202ENST00000518678 HLA-DRB4P13762 266 aa13.08□□□□□ -0.32
TRAM1-202ENST00000518678 GDF5OSQ5U4N7 250 aa13.08□□□□□ -0.32
TRAM1-202ENST00000518678 EBLN2Q6P2I7 272 aa13.08□□□□□ -0.32
TRAM1-202ENST00000518678 STHQ8IWL8 128 aa13.08□□□□□ -0.32
TRAM1-202ENST00000518678 OTORQ9NRC9 128 aa13.08□□□□□ -0.32
TRAM1-202ENST00000518678 HLA-DRB4X5D2U9 266 aa13.08□□□□□ -0.32
TRAM1-202ENST00000518678 LOC102724200A0A096LPH7 203 aaPredicted RBP13.07□□□□□ -0.32
TRAM1-202ENST00000518678 TRAV1-1A0A0B4J248 108 aa13.07□□□□□ -0.32
TRAM1-202ENST00000518678 ZNF705EA8MWA4 302 aaPredicted RBP13.07□□□□□ -0.32
TRAM1-202ENST00000518678 H3BMM0 161 aa13.07□□□□□ -0.32
TRAM1-202ENST00000518678 M0R3E3 92 aa13.07□□□□□ -0.32
TRAM1-202ENST00000518678 TEX261Q6UWH6 196 aa13.07□□□□□ -0.32
TRAM1-202ENST00000518678 TRPT1Q86TN4 253 aaKnown RBP13.07□□□□□ -0.32
TRAM1-202ENST00000518678 A0A1B0GV50 99 aa13.06□□□□□ -0.32
TRAM1-202ENST00000518678 PGPA6NDG6 321 aa13.06□□□□□ -0.32
TRAM1-202ENST00000518678 PRAC2D3DTV9 90 aa13.06□□□□□ -0.32
TRAM1-202ENST00000518678 HBE1P02100 147 aa13.06□□□□□ -0.32
TRAM1-202ENST00000518678 OR8A1Q8NGG7 326 aa13.06□□□□□ -0.32
TRAM1-202ENST00000518678 KMT2CQ8NEZ4 4911 aaKnown RBP13.05□□□□□ -0.32
TRAM1-202ENST00000518678 A0A1W2PRE2 83 aa13.05□□□□□ -0.32
TRAM1-202ENST00000518678 A8MTW9 85 aa13.05□□□□□ -0.32
TRAM1-202ENST00000518678 TEX46H3BTG2 121 aa13.05□□□□□ -0.32
TRAM1-202ENST00000518678 DUSP14O95147 198 aaKnown RBP13.05□□□□□ -0.32
TRAM1-202ENST00000518678 RPL35AP18077 110 aaKnown RBP13.05□□□□□ -0.32
TRAM1-202ENST00000518678 BLOC1S1P78537 153 aa13.05□□□□□ -0.32
TRAM1-202ENST00000518678 ZNF680Q8NEM1 530 aa13.05□□□□□ -0.32
TRAM1-202ENST00000518678 CLUHP3Q96NS8 147 aa13.05□□□□□ -0.32
TRAM1-202ENST00000518678 FAM74A7A6NL05 159 aa13.04□□□□□ -0.32
TRAM1-202ENST00000518678 ZNF705DP0CH99 300 aaPredicted RBP13.04□□□□□ -0.32
TRAM1-202ENST00000518678 ZNF705BP0CI00 300 aaPredicted RBP13.04□□□□□ -0.32
TRAM1-202ENST00000518678 PRB4P10163 310 aaPredicted RBP13.04□□□□□ -0.32
TRAM1-202ENST00000518678 CSN1S1P47710 185 aa13.04□□□□□ -0.32
TRAM1-202ENST00000518678 UBE2G2P60604 165 aa13.04□□□□□ -0.32
TRAM1-202ENST00000518678 RXFP4Q8TDU9 374 aa13.04□□□□□ -0.32
TRAM1-202ENST00000518678 YTHDF2Q9Y5A9 579 aaKnown RBP13.04□□□□□ -0.32
TRAM1-202ENST00000518678 ARL2-SNX15V9GYD0 113 aa13.04□□□□□ -0.32
TRAM1-202ENST00000518678 KIR2DL5BA0A0G2JN68 375 aa13.03□□□□□ -0.32
TRAM1-202ENST00000518678 KIR2DL5BA0A0G2JPC4 375 aa13.03□□□□□ -0.32
TRAM1-202ENST00000518678 GGTLC3B5MD39 225 aa13.03□□□□□ -0.32
TRAM1-202ENST00000518678 IFNA7P01567 189 aa13.03□□□□□ -0.32
TRAM1-202ENST00000518678 PPT1P50897 306 aa13.03□□□□□ -0.32
TRAM1-202ENST00000518678 CNN1P51911 297 aaKnown RBP13.03□□□□□ -0.32
TRAM1-202ENST00000518678 APOC4P55056 127 aa13.03□□□□□ -0.32
TRAM1-202ENST00000518678 CCL20P78556 96 aa13.03□□□□□ -0.32
TRAM1-202ENST00000518678 HIST1H1AQ02539 215 aaPredicted RBP13.03□□□□□ -0.32
TRAM1-202ENST00000518678 KIR2DL5AQ8N109 375 aa13.03□□□□□ -0.32
TRAM1-202ENST00000518678 ARL6IP6Q8N6S5 226 aa13.03□□□□□ -0.32
TRAM1-202ENST00000518678 OR4B1Q8NGF8 309 aa13.03□□□□□ -0.32
TRAM1-202ENST00000518678 OR10J6PQ8NGY7 276 aa13.03□□□□□ -0.32
TRAM1-202ENST00000518678 KIR2DL5BQ8NHK3 375 aa13.03□□□□□ -0.32
TRAM1-202ENST00000518678 CMTM2Q8TAZ6 248 aa13.03□□□□□ -0.32
TRAM1-202ENST00000518678 AGRNO00468 2067 aa13.02□□□□□ -0.33
TRAM1-202ENST00000518678 IGKV3-20P01619 116 aa13.02□□□□□ -0.33
TRAM1-202ENST00000518678 SUMO1P63165 101 aaKnown RBP13.02□□□□□ -0.33
TRAM1-202ENST00000518678 HAGHQ16775 308 aa13.02□□□□□ -0.33
TRAM1-202ENST00000518678 C5orf17Q8NAS9 161 aa13.02□□□□□ -0.33
TRAM1-202ENST00000518678 B9D2Q9BPU9 175 aa13.02□□□□□ -0.33
TRAM1-202ENST00000518678 NKX6-2Q9C056 277 aaPredicted RBP13.02□□□□□ -0.33
TRAM1-202ENST00000518678 HUWE1Q7Z6Z7 4374 aaKnown RBP13.02□□□□□ -0.33
TRAM1-202ENST00000518678 IGKV2-40A0A087WW87 121 aaPredicted RBP13.01□□□□□ -0.33
TRAM1-202ENST00000518678 DIRC3C9JPN6 131 aa13.01□□□□□ -0.33
TRAM1-202ENST00000518678 NPIPB6E9PJ23 425 aa13.01□□□□□ -0.33
TRAM1-202ENST00000518678 IGKV2D-40P01614 121 aaPredicted RBP13.01□□□□□ -0.33
TRAM1-202ENST00000518678 SLC25A5P05141 298 aaKnown RBP13.01□□□□□ -0.33
TRAM1-202ENST00000518678 MORN3Q6PF18 240 aaPredicted RBP13.01□□□□□ -0.33
TRAM1-202ENST00000518678 LYPD6BQ8NI32 183 aa13.01□□□□□ -0.33
TRAM1-202ENST00000518678 CSTL1Q9H114 145 aa13.01□□□□□ -0.33
TRAM1-202ENST00000518678 RBAKDNA6NC62 111 aa13□□□□□ -0.33
TRAM1-202ENST00000518678 PAGE4O60829 102 aa13□□□□□ -0.33
TRAM1-202ENST00000518678 NUTF2P61970 127 aaKnown RBP13□□□□□ -0.33
TRAM1-202ENST00000518678 GNG5P63218 68 aa13□□□□□ -0.33
TRAM1-202ENST00000518678 PMS2P11Q13670 270 aa13□□□□□ -0.33
TRAM1-202ENST00000518678 AMTNQ6UX39 209 aa13□□□□□ -0.33
TRAM1-202ENST00000518678 SBSPONQ8IVN8 264 aa13□□□□□ -0.33
TRAM1-202ENST00000518678 MANBALQ9NQG1 85 aa13□□□□□ -0.33
TRAM1-202ENST00000518678 EPDR1Q9UM22 224 aa13□□□□□ -0.33
TRAM1-202ENST00000518678 UBE2CO00762 179 aa12.99□□□□□ -0.33
TRAM1-202ENST00000518678 CST9LP1Q5W188 147 aa12.99□□□□□ -0.33
TRAM1-202ENST00000518678 C9orf47Q6ZRZ4 202 aa12.99□□□□□ -0.33
TRAM1-202ENST00000518678 CCDC28AQ8IWP9 274 aa12.99□□□□□ -0.33
TRAM1-202ENST00000518678 AGPAT4-IT1Q9H0P7 198 aa12.99□□□□□ -0.33
TRAM1-202ENST00000518678 GNG13Q9P2W3 67 aa12.99□□□□□ -0.33
TRAM1-202ENST00000518678 RPH3ALQ9UNE2 315 aa12.99□□□□□ -0.33
TRAM1-202ENST00000518678 RYR3Q15413 4870 aa12.99□□□□□ -0.33
TRAM1-202ENST00000518678 CA1P00915 261 aaPredicted RBP12.98□□□□□ -0.33
TRAM1-202ENST00000518678 TCRAP04437 139 aa12.98□□□□□ -0.33
TRAM1-202ENST00000518678 GIG44P09565 113 aaPredicted RBP12.98□□□□□ -0.33
TRAM1-202ENST00000518678 ATP5G3P48201 142 aa12.98□□□□□ -0.33
TRAM1-202ENST00000518678 ERCC8Q13216 396 aa12.98□□□□□ -0.33
TRAM1-202ENST00000518678 LINC00477Q96M19 166 aa12.98□□□□□ -0.33
TRAM1-202ENST00000518678 ASCL2Q99929 193 aa12.98□□□□□ -0.33
TRAM1-202ENST00000518678 VGLL1Q99990 258 aa12.98□□□□□ -0.33
TRAM1-202ENST00000518678 SLC35B3Q9H1N7 401 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms