RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 PYY3Q5JQD4 70 aa6.55□□□□□ -1.36
VPS13B-206ENST00000496144 K7EIM0 57 aa6.55□□□□□ -1.36
VPS13B-206ENST00000496144 HSPB9Q9BQS6 159 aa6.55□□□□□ -1.36
VPS13B-206ENST00000496144 RNASE7Q9H1E1 156 aaKnown RBP6.55□□□□□ -1.36
VPS13B-206ENST00000496144 IGHV3-23P01764 117 aa6.55□□□□□ -1.36
VPS13B-206ENST00000496144 TCTEX1D4Q5JR98 221 aa6.55□□□□□ -1.36
VPS13B-206ENST00000496144 VN1R17PQ8TDU5 208 aa6.55□□□□□ -1.36
VPS13B-206ENST00000496144 FN1P02751 2386 aaKnown RBP6.55□□□□□ -1.36
VPS13B-206ENST00000496144 GNG5P63218 68 aa6.55□□□□□ -1.36
VPS13B-206ENST00000496144 FMC1Q96HJ9 113 aa6.55□□□□□ -1.36
VPS13B-206ENST00000496144 TXN2Q99757 166 aa6.55□□□□□ -1.36
VPS13B-206ENST00000496144 ITPR3Q14573 2671 aa6.54□□□□□ -1.36
VPS13B-206ENST00000496144 WI2-2373I1.2A0A1W2PRP0 233 aa6.54□□□□□ -1.36
VPS13B-206ENST00000496144 H3BRN7 92 aa6.54□□□□□ -1.36
VPS13B-206ENST00000496144 IBA57Q5T440 356 aaKnown RBP6.54□□□□□ -1.36
VPS13B-206ENST00000496144 FAM231DQ6ZW35 169 aa6.54□□□□□ -1.36
VPS13B-206ENST00000496144 GBGT1Q8N5D6 347 aa6.54□□□□□ -1.36
VPS13B-206ENST00000496144 TMEM190Q8WZ59 177 aa6.54□□□□□ -1.36
VPS13B-206ENST00000496144 EPDR1Q9UM22 224 aa6.54□□□□□ -1.36
VPS13B-206ENST00000496144 IGKV3-7A0A075B6H7 116 aa6.54□□□□□ -1.36
VPS13B-206ENST00000496144 MGST1P10620 155 aaKnown RBP6.54□□□□□ -1.36
VPS13B-206ENST00000496144 PSG1P11464 419 aa6.54□□□□□ -1.36
VPS13B-206ENST00000496144 LYZP61626 148 aa6.54□□□□□ -1.36
VPS13B-206ENST00000496144 GNB1LQ9BYB4 327 aa6.54□□□□□ -1.36
VPS13B-206ENST00000496144 SLC25A39Q9BZJ4 359 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-206ENST00000496144 AMBPP02760 352 aa6.54□□□□□ -1.36
VPS13B-206ENST00000496144 BLNKQ8WV28 456 aa6.54□□□□□ -1.36
VPS13B-206ENST00000496144 DLX4Q92988 240 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-206ENST00000496144 KLF12Q9Y4X4 402 aa6.54□□□□□ -1.36
VPS13B-206ENST00000496144 AMY1AP04745 511 aa6.54□□□□□ -1.36
VPS13B-206ENST00000496144 CDPF1Q6NVV7 123 aa6.54□□□□□ -1.36
VPS13B-206ENST00000496144 MRPL18Q9H0U6 180 aaKnown RBP6.54□□□□□ -1.36
VPS13B-206ENST00000496144 DAZ1Q9NQZ3 744 aaKnown RBP6.54□□□□□ -1.36
VPS13B-206ENST00000496144 ACANP16112 2415 aa6.54□□□□□ -1.36
VPS13B-206ENST00000496144 IGLV11-55A0A075B6I3 123 aa6.53□□□□□ -1.36
VPS13B-206ENST00000496144 LTAP01374 205 aa6.53□□□□□ -1.36
VPS13B-206ENST00000496144 SLC25A5P05141 298 aaKnown RBP6.53□□□□□ -1.36
VPS13B-206ENST00000496144 NHLRC2Q8NBF2 726 aa6.53□□□□□ -1.36
VPS13B-206ENST00000496144 MUC7Q8TAX7 377 aa6.53□□□□□ -1.36
VPS13B-206ENST00000496144 Q9H3A6 140 aa6.53□□□□□ -1.36
VPS13B-206ENST00000496144 RPL35AP18077 110 aaKnown RBP6.53□□□□□ -1.36
VPS13B-206ENST00000496144 ZFAND6Q6FIF0 208 aa6.53□□□□□ -1.36
VPS13B-206ENST00000496144 OR8I2Q8N0Y5 310 aa6.53□□□□□ -1.36
VPS13B-206ENST00000496144 OTORQ9NRC9 128 aa6.53□□□□□ -1.36
VPS13B-206ENST00000496144 NUPR2A6NF83 97 aa6.53□□□□□ -1.36
VPS13B-206ENST00000496144 IZUMO1RA6ND01 250 aa6.53□□□□□ -1.36
VPS13B-206ENST00000496144 EGR2P11161 476 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-206ENST00000496144 PSMB8P28062 276 aa6.53□□□□□ -1.36
VPS13B-206ENST00000496144 ATG101Q9BSB4 218 aa6.53□□□□□ -1.36
VPS13B-206ENST00000496144 SHANK2-AS3Q9BTD1 123 aa6.53□□□□□ -1.36
VPS13B-206ENST00000496144 TEX48A0A1B0GUV7 120 aa6.53□□□□□ -1.36
VPS13B-206ENST00000496144 LEMD1Q68G75 181 aa6.53□□□□□ -1.36
VPS13B-206ENST00000496144 LINC00479Q96M42 142 aa6.53□□□□□ -1.36
VPS13B-206ENST00000496144 ZNF586Q9NXT0 402 aa6.53□□□□□ -1.36
VPS13B-206ENST00000496144 TRAV34A0A0B4J273 112 aa6.52□□□□□ -1.37
VPS13B-206ENST00000496144 CLEC3BP05452 202 aa6.52□□□□□ -1.37
VPS13B-206ENST00000496144 WDR73Q6P4I2 378 aa6.52□□□□□ -1.37
VPS13B-206ENST00000496144 PIFOQ8TCI5 191 aa6.52□□□□□ -1.37
VPS13B-206ENST00000496144 TENM4Q6N022 2769 aa6.52□□□□□ -1.37
VPS13B-206ENST00000496144 TRBV6-1A0A0K0K1D8 114 aa6.52□□□□□ -1.37
VPS13B-206ENST00000496144 ZNF705GA8MUZ8 300 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-206ENST00000496144 NBEAP1P0C6P0 100 aa6.52□□□□□ -1.37
VPS13B-206ENST00000496144 RANP62826 216 aaKnown RBP6.52□□□□□ -1.37
VPS13B-206ENST00000496144 TMEM136Q6ZRR5 245 aa6.52□□□□□ -1.37
VPS13B-206ENST00000496144 SPAG8Q99932 426 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-206ENST00000496144 RD3LP0DJH9 198 aa6.52□□□□□ -1.37
VPS13B-206ENST00000496144 CBLN1P23435 193 aa6.52□□□□□ -1.37
VPS13B-206ENST00000496144 KLK9Q2XQG4 91 aa6.52□□□□□ -1.37
VPS13B-206ENST00000496144 WIPF2Q8TF74 440 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-206ENST00000496144 KLK9Q9UKQ9 250 aa6.52□□□□□ -1.37
VPS13B-206ENST00000496144 GOLT1BQ9Y3E0 138 aa6.52□□□□□ -1.37
VPS13B-206ENST00000496144 UBE2G1P62253 170 aa6.52□□□□□ -1.37
VPS13B-206ENST00000496144 C5orf17Q8NAS9 161 aa6.52□□□□□ -1.37
VPS13B-206ENST00000496144 PGPA6NDG6 321 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 IGKV1-17P01599 117 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 KRTAP10-3P60369 221 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 RASL11AQ6T310 242 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 ZNF600Q6ZNG1 722 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 NUDT10Q8NFP7 164 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 NUDT11Q96G61 164 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 FANCD2OSQ96PS1 177 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 DOCK11Q5JSL3 2073 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 F8W735 103 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-206ENST00000496144 MRPS12O15235 138 aaKnown RBP6.51□□□□□ -1.37
VPS13B-206ENST00000496144 NDPQ00604 133 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 ZNF492Q9P255 531 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 TP53TG3Q9ULZ0 132 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 OR2T8A6NH00 312 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 COX19Q49B96 90 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 BAGE2Q86Y30 109 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 ZFHX3Q15911 3703 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 MTORP42345 2549 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 NDUFA4O00483 81 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 SPRY2O43597 315 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 KALRNO60229 2985 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 TCRAP04437 139 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 ESDP10768 282 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 USF2Q15853 346 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-206ENST00000496144 CHRDL1Q9BU40 450 aa6.51□□□□□ -1.37
VPS13B-206ENST00000496144 LINC00587B1AMM8 73 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms