RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 MT-CO2P00403 227 aa9.39□□□□□ -0.91
IRF3-218ENST00000597369 OR10J1P30954 320 aa9.39□□□□□ -0.91
IRF3-218ENST00000597369 PEA15Q15121 130 aa9.39□□□□□ -0.91
IRF3-218ENST00000597369 ZNF726P1Q15940 193 aa9.39□□□□□ -0.91
IRF3-218ENST00000597369 MLANAQ16655 118 aa9.39□□□□□ -0.91
IRF3-218ENST00000597369 ODF3L2Q3SX64 289 aa9.39□□□□□ -0.91
IRF3-218ENST00000597369 LCN15Q6UWW0 184 aa9.39□□□□□ -0.91
IRF3-218ENST00000597369 C19orf35Q6ZS72 473 aa9.39□□□□□ -0.91
IRF3-218ENST00000597369 FAM223AQ8IWN6 122 aa9.39□□□□□ -0.91
IRF3-218ENST00000597369 TTC9CQ8N5M4 171 aa9.39□□□□□ -0.91
IRF3-218ENST00000597369 LINC00052Q96N35 136 aa9.39□□□□□ -0.91
IRF3-218ENST00000597369 SPAG8Q99932 426 aaPredicted RBP9.39□□□□□ -0.91
IRF3-218ENST00000597369 NDUFAF3Q9BU61 184 aa9.39□□□□□ -0.91
IRF3-218ENST00000597369 MAP1LC3BQ9GZQ8 125 aa9.39□□□□□ -0.91
IRF3-218ENST00000597369 SLC45A2Q9UMX9 530 aa9.39□□□□□ -0.91
IRF3-218ENST00000597369 TRBV9A0A0B4J1U6 114 aa9.38□□□□□ -0.91
IRF3-218ENST00000597369 YIF1AO95070 293 aa9.38□□□□□ -0.91
IRF3-218ENST00000597369 OR2C1O95371 312 aa9.38□□□□□ -0.91
IRF3-218ENST00000597369 IFNA1P01562 189 aa9.38□□□□□ -0.91
IRF3-218ENST00000597369 RBMY1CP0DJD4 496 aa9.38□□□□□ -0.91
IRF3-218ENST00000597369 C8orf88P0DMB2 117 aa9.38□□□□□ -0.91
IRF3-218ENST00000597369 CDC34P49427 236 aaPredicted RBP9.38□□□□□ -0.91
IRF3-218ENST00000597369 ATP5G2Q06055 141 aa9.38□□□□□ -0.91
IRF3-218ENST00000597369 GUK1Q16774 197 aa9.38□□□□□ -0.91
IRF3-218ENST00000597369 CYP2G1PQ6ZSU1 146 aa9.38□□□□□ -0.91
IRF3-218ENST00000597369 THAP8Q8NA92 274 aa9.38□□□□□ -0.91
IRF3-218ENST00000597369 NPIPB3Q92617 1050 aa9.38□□□□□ -0.91
IRF3-218ENST00000597369 EIF5A2Q9GZV4 153 aaKnown RBP9.38□□□□□ -0.91
IRF3-218ENST00000597369 SLC25A22Q9H936 323 aa9.38□□□□□ -0.91
IRF3-218ENST00000597369 A0A1W2PPV4 95 aa9.37□□□□□ -0.91
IRF3-218ENST00000597369 TMEM218A2RU14 115 aa9.37□□□□□ -0.91
IRF3-218ENST00000597369 ZFP92A6NM28 416 aa9.37□□□□□ -0.91
IRF3-218ENST00000597369 PPP5D1E7EU14 171 aa9.37□□□□□ -0.91
IRF3-218ENST00000597369 CD5P06127 495 aa9.37□□□□□ -0.91
IRF3-218ENST00000597369 RND2P52198 227 aa9.37□□□□□ -0.91
IRF3-218ENST00000597369 SELENOTP62341 195 aa9.37□□□□□ -0.91
IRF3-218ENST00000597369 CCL20P78556 96 aa9.37□□□□□ -0.91
IRF3-218ENST00000597369 RHOGP84095 191 aa9.37□□□□□ -0.91
IRF3-218ENST00000597369 SRSF3P84103 164 aaKnown RBP9.37□□□□□ -0.91
IRF3-218ENST00000597369 SSX7Q7RTT5 188 aa9.37□□□□□ -0.91
IRF3-218ENST00000597369 RAB24Q969Q5 203 aa9.37□□□□□ -0.91
IRF3-218ENST00000597369 SMDT1Q9H4I9 107 aa9.37□□□□□ -0.91
IRF3-218ENST00000597369 TMEM231Q9H6L2 316 aa9.37□□□□□ -0.91
IRF3-218ENST00000597369 IGKV1OR2-108A0A075B7D4 117 aa9.36□□□□□ -0.91
IRF3-218ENST00000597369 RBFOX3A6NFN3 312 aa9.36□□□□□ -0.91
IRF3-218ENST00000597369 I3L2K1 104 aa9.36□□□□□ -0.91
IRF3-218ENST00000597369 J3QL48 77 aa9.36□□□□□ -0.91
IRF3-218ENST00000597369 LINC00869P0C866 280 aa9.36□□□□□ -0.91
IRF3-218ENST00000597369 HIST1H1BP16401 226 aaKnown RBP9.36□□□□□ -0.91
IRF3-218ENST00000597369 FGF8P55075 233 aaPredicted RBP9.36□□□□□ -0.91
IRF3-218ENST00000597369 RHOBP62745 196 aa9.36□□□□□ -0.91
IRF3-218ENST00000597369 GCSAMLQ5JQS6 135 aa9.36□□□□□ -0.91
IRF3-218ENST00000597369 SERTAD4-AS1Q5TG53 156 aa9.36□□□□□ -0.91
IRF3-218ENST00000597369 Q8NAQ8 132 aa9.36□□□□□ -0.91
IRF3-218ENST00000597369 TMEM116Q8NCL8 245 aa9.36□□□□□ -0.91
IRF3-218ENST00000597369 OR4X1Q8NH49 305 aa9.36□□□□□ -0.91
IRF3-218ENST00000597369 TRGV9Q99603 122 aa9.36□□□□□ -0.91
IRF3-218ENST00000597369 THYN1Q9P016 225 aa9.36□□□□□ -0.91
IRF3-218ENST00000597369 IGLV11-55A0A075B6I3 123 aa9.35□□□□□ -0.91
IRF3-218ENST00000597369 IGKV1D-37A0A075B6S9 117 aa9.35□□□□□ -0.91
IRF3-218ENST00000597369 IGHV3-21A0A0B4J1V1 117 aa9.35□□□□□ -0.91
IRF3-218ENST00000597369 TSPAN4O14817 238 aa9.35□□□□□ -0.91
IRF3-218ENST00000597369 IGHV3-48P01763 117 aa9.35□□□□□ -0.91
IRF3-218ENST00000597369 PPT1P50897 306 aa9.35□□□□□ -0.91
IRF3-218ENST00000597369 RNF212Q495C1 297 aa9.35□□□□□ -0.91
IRF3-218ENST00000597369 FAM106AQ4KMX7 169 aa9.35□□□□□ -0.91
IRF3-218ENST00000597369 ZNF506Q5JVG8 444 aa9.35□□□□□ -0.91
IRF3-218ENST00000597369 Q5VSD8 79 aa9.35□□□□□ -0.91
IRF3-218ENST00000597369 MRPL36Q9P0J6 103 aaKnown RBP9.35□□□□□ -0.91
IRF3-218ENST00000597369 GNG13Q9P2W3 67 aa9.35□□□□□ -0.91
IRF3-218ENST00000597369 DEFB131BA0A096LNP1 70 aa9.34□□□□□ -0.91
IRF3-218ENST00000597369 LOC102723971A0A1B0GUV8 181 aa9.34□□□□□ -0.91
IRF3-218ENST00000597369 F8W036 122 aa9.34□□□□□ -0.91
IRF3-218ENST00000597369 K7EIM0 57 aa9.34□□□□□ -0.91
IRF3-218ENST00000597369 FABP1P07148 127 aa9.34□□□□□ -0.91
IRF3-218ENST00000597369 SFTA3P0C7M3 94 aa9.34□□□□□ -0.91
IRF3-218ENST00000597369 BCL2P10415 239 aa9.34□□□□□ -0.91
IRF3-218ENST00000597369 TAGLN2P37802 199 aaKnown RBP9.34□□□□□ -0.91
IRF3-218ENST00000597369 SPATA12Q7Z6I5 190 aa9.34□□□□□ -0.91
IRF3-218ENST00000597369 LYPD1Q8N2G4 141 aa9.34□□□□□ -0.91
IRF3-218ENST00000597369 NECAP1Q8NC96 275 aa9.34□□□□□ -0.91
IRF3-218ENST00000597369 OR1L4Q8NGR5 311 aa9.34□□□□□ -0.91
IRF3-218ENST00000597369 FANCD2OSQ96PS1 177 aa9.34□□□□□ -0.91
IRF3-218ENST00000597369 RNF2Q99496 336 aa9.34□□□□□ -0.91
IRF3-218ENST00000597369 SCRT1Q9BWW7 348 aa9.34□□□□□ -0.91
IRF3-218ENST00000597369 MRPL27Q9P0M9 148 aaKnown RBP9.34□□□□□ -0.91
IRF3-218ENST00000597369 ZNF320A2RRD8 509 aa9.33□□□□□ -0.92
IRF3-218ENST00000597369 HMGB3O15347 200 aaKnown RBP9.33□□□□□ -0.92
IRF3-218ENST00000597369 CLN5O75503 358 aa9.33□□□□□ -0.92
IRF3-218ENST00000597369 SCGB2A1O75556 95 aa9.33□□□□□ -0.92
IRF3-218ENST00000597369 EIF3GO75821 320 aaKnown RBP eCLIP9.33□□□□□ -0.92
IRF3-218ENST00000597369 CXorf1O96002 111 aa9.33□□□□□ -0.92
IRF3-218ENST00000597369 STAG3L2P0CL84 134 aa9.33□□□□□ -0.92
IRF3-218ENST00000597369 STAG3L3P0CL85 134 aa9.33□□□□□ -0.92
IRF3-218ENST00000597369 GATA2P23769 480 aaPredicted RBP9.33□□□□□ -0.92
IRF3-218ENST00000597369 NPBWR1P48145 328 aa9.33□□□□□ -0.92
IRF3-218ENST00000597369 PSMB3P49720 205 aa9.33□□□□□ -0.92
IRF3-218ENST00000597369 ZNF90Q03938 601 aa9.33□□□□□ -0.92
IRF3-218ENST00000597369 KLK9Q2XQG4 91 aa9.33□□□□□ -0.92
IRF3-218ENST00000597369 KHDC3LQ587J8 217 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms