RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 Q6ZVH6 145 aa15.32■□□□□ 0.04
PCF11-203ENST00000530304 BCL6BQ8N143 479 aaPredicted RBP15.32■□□□□ 0.04
PCF11-203ENST00000530304 CFHR4Q92496 578 aa15.32■□□□□ 0.04
PCF11-203ENST00000530304 TCF21O43680 179 aa15.31■□□□□ 0.04
PCF11-203ENST00000530304 OR11H6Q8NGC7 330 aa15.31■□□□□ 0.04
PCF11-203ENST00000530304 MAP1LC3CQ9BXW4 147 aa15.31■□□□□ 0.04
PCF11-203ENST00000530304 RELNP78509 3460 aa15.31■□□□□ 0.04
PCF11-203ENST00000530304 FAM90A27PA6NNH2 459 aa15.31■□□□□ 0.04
PCF11-203ENST00000530304 NPBQ8NG41 125 aa15.31■□□□□ 0.04
PCF11-203ENST00000530304 NDUFA3O95167 84 aa15.3■□□□□ 0.04
PCF11-203ENST00000530304 FBLN7Q53RD9 439 aa15.3■□□□□ 0.04
PCF11-203ENST00000530304 NEU4Q8WWR8 484 aaPredicted RBP15.3■□□□□ 0.04
PCF11-203ENST00000530304 MCRIP2Q9BUT9 160 aaKnown RBP15.3■□□□□ 0.04
PCF11-203ENST00000530304 TMEM191AQ9H0A3 160 aa15.3■□□□□ 0.04
PCF11-203ENST00000530304 ARHGAP32A7KAX9 2087 aa15.3■□□□□ 0.04
PCF11-203ENST00000530304 GNG7O60262 68 aa15.3■□□□□ 0.04
PCF11-203ENST00000530304 C21orf62-AS1Q17RA5 79 aa15.3■□□□□ 0.04
PCF11-203ENST00000530304 TPPP3Q9BW30 176 aa15.3■□□□□ 0.04
PCF11-203ENST00000530304 KLRD1Q13241 179 aa15.3■□□□□ 0.04
PCF11-203ENST00000530304 GATD1Q8NB37 220 aa15.3■□□□□ 0.04
PCF11-203ENST00000530304 C8orf49Q96NF6 230 aa15.3■□□□□ 0.04
PCF11-203ENST00000530304 SPTBN2O15020 2390 aa15.29■□□□□ 0.04
PCF11-203ENST00000530304 HES1Q14469 280 aa15.29■□□□□ 0.04
PCF11-203ENST00000530304 PET117Q6UWS5 81 aa15.29■□□□□ 0.04
PCF11-203ENST00000530304 HSPB8Q9UJY1 196 aa15.29■□□□□ 0.04
PCF11-203ENST00000530304 TIMM8BQ9Y5J9 83 aaPredicted RBP15.29■□□□□ 0.04
PCF11-203ENST00000530304 H0Y8G0 127 aa15.29■□□□□ 0.04
PCF11-203ENST00000530304 FANCD2OSQ96PS1 177 aa15.29■□□□□ 0.04
PCF11-203ENST00000530304 RAB1BQ9H0U4 201 aa15.29■□□□□ 0.04
PCF11-203ENST00000530304 COX11Q9Y6N1 276 aa15.29■□□□□ 0.04
PCF11-203ENST00000530304 TRAV30A0A087WSZ9 112 aa15.28■□□□□ 0.04
PCF11-203ENST00000530304 CEACAM3P40198 252 aa15.28■□□□□ 0.04
PCF11-203ENST00000530304 C5orf64Q2M2E5 130 aa15.28■□□□□ 0.04
PCF11-203ENST00000530304 AAMDCQ9H7C9 122 aa15.28■□□□□ 0.04
PCF11-203ENST00000530304 CBY1Q9Y3M2 126 aa15.28■□□□□ 0.04
PCF11-203ENST00000530304 IGLV11-55A0A075B6I3 123 aa15.27■□□□□ 0.04
PCF11-203ENST00000530304 A0A1B0GW15 77 aa15.27■□□□□ 0.04
PCF11-203ENST00000530304 A0A1W2PRD5 423 aa15.27■□□□□ 0.04
PCF11-203ENST00000530304 A0A1W2PRF3 423 aa15.27■□□□□ 0.04
PCF11-203ENST00000530304 A0A1W2PRM7 423 aa15.27■□□□□ 0.04
PCF11-203ENST00000530304 HSBP1L1C9JCN9 74 aa15.27■□□□□ 0.04
PCF11-203ENST00000530304 K7ENP7 123 aa15.27■□□□□ 0.04
PCF11-203ENST00000530304 AP5S1Q9NUS5 200 aa15.27■□□□□ 0.04
PCF11-203ENST00000530304 CCL25O15444 150 aa15.27■□□□□ 0.03
PCF11-203ENST00000530304 CT45A10P0DMU9 189 aa15.27■□□□□ 0.03
PCF11-203ENST00000530304 MFAP4P55083 255 aa15.27■□□□□ 0.03
PCF11-203ENST00000530304 PDE6HQ13956 83 aa15.27■□□□□ 0.03
PCF11-203ENST00000530304 Q6AWC8 147 aa15.27■□□□□ 0.03
PCF11-203ENST00000530304 ZNF738Q8NE65 137 aa15.27■□□□□ 0.03
PCF11-203ENST00000530304 PTTG1IPP53801 180 aa15.26■□□□□ 0.03
PCF11-203ENST00000530304 F8W735 103 aaPredicted RBP15.26■□□□□ 0.03
PCF11-203ENST00000530304 MPV17L2Q567V2 206 aa15.26■□□□□ 0.03
PCF11-203ENST00000530304 S100A7AQ86SG5 101 aa15.26■□□□□ 0.03
PCF11-203ENST00000530304 NPIPB5A8MRT5 1133 aa15.25■□□□□ 0.03
PCF11-203ENST00000530304 SLC25A34Q6PIV7 304 aa15.25■□□□□ 0.03
PCF11-203ENST00000530304 PRSS3P2Q8NHM4 247 aa15.25■□□□□ 0.03
PCF11-203ENST00000530304 PMCHL2Q9BQD1 86 aa15.25■□□□□ 0.03
PCF11-203ENST00000530304 ODF3BA8MYP8 253 aa15.25■□□□□ 0.03
PCF11-203ENST00000530304 NBL1P41271 181 aa15.25■□□□□ 0.03
PCF11-203ENST00000530304 FOXC1Q12948 553 aa15.25■□□□□ 0.03
PCF11-203ENST00000530304 ZNF562Q6V9R5 426 aa15.25■□□□□ 0.03
PCF11-203ENST00000530304 SCRT2Q9NQ03 307 aa15.25■□□□□ 0.03
PCF11-203ENST00000530304 ABCA4P78363 2273 aa15.24■□□□□ 0.03
PCF11-203ENST00000530304 FBXL19-AS1Q494R0 122 aa15.24■□□□□ 0.03
PCF11-203ENST00000530304 ZNF493Q6ZR52 646 aa15.24■□□□□ 0.03
PCF11-203ENST00000530304 LOC105371242A0A075B767 164 aa15.24■□□□□ 0.03
PCF11-203ENST00000530304 TMSB15BA0A087X1C1 80 aa15.24■□□□□ 0.03
PCF11-203ENST00000530304 CSN1S1P47710 185 aa15.24■□□□□ 0.03
PCF11-203ENST00000530304 NDPQ00604 133 aa15.24■□□□□ 0.03
PCF11-203ENST00000530304 LINC01545Q5VT33 79 aa15.24■□□□□ 0.03
PCF11-203ENST00000530304 LYZL1Q6UWQ5 148 aa15.24■□□□□ 0.03
PCF11-203ENST00000530304 FA2HQ7L5A8 372 aa15.24■□□□□ 0.03
PCF11-203ENST00000530304 ARPC1AQ92747 370 aa15.24■□□□□ 0.03
PCF11-203ENST00000530304 TIMD4Q96H15 378 aa15.24■□□□□ 0.03
PCF11-203ENST00000530304 ZNF48Q96MX3 618 aaPredicted RBP15.24■□□□□ 0.03
PCF11-203ENST00000530304 TLN1Q9Y490 2541 aaKnown RBP15.24■□□□□ 0.03
PCF11-203ENST00000530304 NCBP2LA6PVI3 153 aaKnown RBP15.23■□□□□ 0.03
PCF11-203ENST00000530304 M0R1W7 72 aa15.23■□□□□ 0.03
PCF11-203ENST00000530304 IGHV3-23P01764 117 aa15.23■□□□□ 0.03
PCF11-203ENST00000530304 PRTN3P24158 256 aa15.23■□□□□ 0.03
PCF11-203ENST00000530304 UBE2V1Q13404 147 aa15.23■□□□□ 0.03
PCF11-203ENST00000530304 ZNF747Q9BV97 191 aa15.23■□□□□ 0.03
PCF11-203ENST00000530304 C21orf62Q9NYP8 219 aa15.23■□□□□ 0.03
PCF11-203ENST00000530304 SERTM2A0A1B0GWG4 89 aa15.23■□□□□ 0.03
PCF11-203ENST00000530304 TMEM189A5PLL7 270 aa15.23■□□□□ 0.03
PCF11-203ENST00000530304 TTC9CQ8N5M4 171 aa15.23■□□□□ 0.03
PCF11-203ENST00000530304 IFI27P40305 119 aaPredicted RBP15.22■□□□□ 0.03
PCF11-203ENST00000530304 PSG9Q00887 426 aa15.22■□□□□ 0.03
PCF11-203ENST00000530304 ANKHD1Q8IWZ3 2542 aaKnown RBP15.22■□□□□ 0.03
PCF11-203ENST00000530304 IGKV2-40A0A087WW87 121 aaPredicted RBP15.22■□□□□ 0.03
PCF11-203ENST00000530304 TMEM213A2RRL7 107 aa15.22■□□□□ 0.03
PCF11-203ENST00000530304 SH2D1AO60880 128 aa15.22■□□□□ 0.03
PCF11-203ENST00000530304 NUDT3O95989 172 aa15.22■□□□□ 0.03
PCF11-203ENST00000530304 IGKV2D-40P01614 121 aaPredicted RBP15.22■□□□□ 0.03
PCF11-203ENST00000530304 FAM106CPP0CH98 169 aa15.22■□□□□ 0.03
PCF11-203ENST00000530304 FAM106AQ4KMX7 169 aa15.22■□□□□ 0.03
PCF11-203ENST00000530304 OR10AG1Q8NH19 301 aa15.22■□□□□ 0.03
PCF11-203ENST00000530304 MS4A6AQ9H2W1 248 aa15.22■□□□□ 0.03
PCF11-203ENST00000530304 CDSNQ15517 529 aa15.21■□□□□ 0.03
PCF11-203ENST00000530304 D6R8Y8 96 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 290 ms