RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 F6UB75 175 aa12.09□□□□□ -0.47
SREBF1-219ENST00000580540 INMT-MINDY4F8WBC2 141 aa12.09□□□□□ -0.47
SREBF1-219ENST00000580540 H3BRN7 92 aa12.09□□□□□ -0.47
SREBF1-219ENST00000580540 AGPAT2O15120 278 aa12.09□□□□□ -0.47
SREBF1-219ENST00000580540 SIX6O95475 246 aa12.09□□□□□ -0.47
SREBF1-219ENST00000580540 SAMD13Q5VXD3 122 aa12.09□□□□□ -0.47
SREBF1-219ENST00000580540 EBLN2Q6P2I7 272 aa12.09□□□□□ -0.47
SREBF1-219ENST00000580540 CEMP1Q6PRD7 247 aaPredicted RBP12.09□□□□□ -0.47
SREBF1-219ENST00000580540 FOXI2Q6ZQN5 318 aa12.09□□□□□ -0.47
SREBF1-219ENST00000580540 C20orf173Q96LM9 149 aa12.09□□□□□ -0.47
SREBF1-219ENST00000580540 C1QTNF4Q9BXJ3 329 aa12.09□□□□□ -0.47
SREBF1-219ENST00000580540 C11orf68Q9H3H3 251 aaKnown RBP12.09□□□□□ -0.47
SREBF1-219ENST00000580540 SAV1Q9H4B6 383 aaPredicted RBP12.09□□□□□ -0.47
SREBF1-219ENST00000580540 RPRMQ9NS64 109 aa12.09□□□□□ -0.47
SREBF1-219ENST00000580540 PLECQ15149 4684 aaKnown RBP12.09□□□□□ -0.47
SREBF1-219ENST00000580540 IGHV4-28A0A0C4DH34 117 aa12.08□□□□□ -0.48
SREBF1-219ENST00000580540 PLP1P60201 277 aa12.08□□□□□ -0.48
SREBF1-219ENST00000580540 IGFL4Q6B9Z1 124 aa12.08□□□□□ -0.48
SREBF1-219ENST00000580540 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.08□□□□□ -0.48
SREBF1-219ENST00000580540 S100A7AQ86SG5 101 aa12.08□□□□□ -0.48
SREBF1-219ENST00000580540 ZNF546Q86UE3 836 aa12.08□□□□□ -0.48
SREBF1-219ENST00000580540 PHLDA1Q8WV24 401 aaPredicted RBP12.08□□□□□ -0.48
SREBF1-219ENST00000580540 LYSTQ99698 3801 aa12.08□□□□□ -0.48
SREBF1-219ENST00000580540 C11orf1Q9H5F2 150 aa12.08□□□□□ -0.48
SREBF1-219ENST00000580540 KLK5Q9Y337 293 aaPredicted RBP12.08□□□□□ -0.48
SREBF1-219ENST00000580540 RPL7P18124 248 aaKnown RBP12.07□□□□□ -0.48
SREBF1-219ENST00000580540 DEFA1P59665 94 aa12.07□□□□□ -0.48
SREBF1-219ENST00000580540 DEFA3P59666 94 aa12.07□□□□□ -0.48
SREBF1-219ENST00000580540 RAB31Q13636 194 aa12.07□□□□□ -0.48
SREBF1-219ENST00000580540 PATE2Q6UY27 113 aa12.07□□□□□ -0.48
SREBF1-219ENST00000580540 Q8NAQ8 132 aa12.07□□□□□ -0.48
SREBF1-219ENST00000580540 CSNK1G2-AS1Q8NCQ2 148 aa12.07□□□□□ -0.48
SREBF1-219ENST00000580540 C17orf77Q96MU5 243 aa12.07□□□□□ -0.48
SREBF1-219ENST00000580540 MGST2Q99735 147 aa12.07□□□□□ -0.48
SREBF1-219ENST00000580540 MFFQ9GZY8 342 aa12.07□□□□□ -0.48
SREBF1-219ENST00000580540 ARV1Q9H2C2 271 aa12.07□□□□□ -0.48
SREBF1-219ENST00000580540 X6R8D5 127 aa12.07□□□□□ -0.48
SREBF1-219ENST00000580540 IGHV3OR16-12A0A075B7B8 117 aa12.06□□□□□ -0.48
SREBF1-219ENST00000580540 IGSF23A1L1A6 192 aa12.06□□□□□ -0.48
SREBF1-219ENST00000580540 ZNF705EA8MWA4 302 aaPredicted RBP12.06□□□□□ -0.48
SREBF1-219ENST00000580540 COX7A2P2O60397 106 aa12.06□□□□□ -0.48
SREBF1-219ENST00000580540 PRAF2O60831 178 aa12.06□□□□□ -0.48
SREBF1-219ENST00000580540 RBMY1A1P0DJD3 496 aaKnown RBP12.06□□□□□ -0.48
SREBF1-219ENST00000580540 RBMY1CP0DJD4 496 aa12.06□□□□□ -0.48
SREBF1-219ENST00000580540 MIFP14174 115 aa12.06□□□□□ -0.48
SREBF1-219ENST00000580540 CAMLGP49069 296 aa12.06□□□□□ -0.48
SREBF1-219ENST00000580540 SULT1A1P50225 295 aa12.06□□□□□ -0.48
SREBF1-219ENST00000580540 IL15RAQ13261 267 aa12.06□□□□□ -0.48
SREBF1-219ENST00000580540 RBMY1FQ15415 496 aaKnown RBP12.06□□□□□ -0.48
SREBF1-219ENST00000580540 FAM78BQ5VT40 261 aa12.06□□□□□ -0.48
SREBF1-219ENST00000580540 STX12Q86Y82 276 aa12.06□□□□□ -0.48
SREBF1-219ENST00000580540 TMEM252Q8N6L7 170 aa12.06□□□□□ -0.48
SREBF1-219ENST00000580540 LRRC20Q8TCA0 184 aa12.06□□□□□ -0.48
SREBF1-219ENST00000580540 LYRM2Q9NU23 88 aaPredicted RBP12.06□□□□□ -0.48
SREBF1-219ENST00000580540 UQCC1Q9NVA1 299 aa12.06□□□□□ -0.48
SREBF1-219ENST00000580540 UBE2L5PA0A1B0GUS4 154 aa12.05□□□□□ -0.48
SREBF1-219ENST00000580540 PSG9Q00887 426 aa12.05□□□□□ -0.48
SREBF1-219ENST00000580540 LRRC37A5PQ49AS3 106 aa12.05□□□□□ -0.48
SREBF1-219ENST00000580540 PXDC1Q5TGL8 231 aa12.05□□□□□ -0.48
SREBF1-219ENST00000580540 SPATA31B1PQ5VZV4 182 aa12.05□□□□□ -0.48
SREBF1-219ENST00000580540 LINC00305Q7Z4B0 112 aa12.05□□□□□ -0.48
SREBF1-219ENST00000580540 RNF182Q8N6D2 247 aa12.05□□□□□ -0.48
SREBF1-219ENST00000580540 SLC35B3Q9H1N7 401 aa12.05□□□□□ -0.48
SREBF1-219ENST00000580540 ALMS1Q8TCU4 4167 aa12.04□□□□□ -0.48
SREBF1-219ENST00000580540 A0A0J9YX75 114 aa12.04□□□□□ -0.48
SREBF1-219ENST00000580540 RLN2P04090 185 aa12.04□□□□□ -0.48
SREBF1-219ENST00000580540 SNRPCP09234 159 aaKnown RBP12.04□□□□□ -0.48
SREBF1-219ENST00000580540 S100A11P31949 105 aa12.04□□□□□ -0.48
SREBF1-219ENST00000580540 HBG1P69891 147 aa12.04□□□□□ -0.48
SREBF1-219ENST00000580540 HBG2P69892 147 aa12.04□□□□□ -0.48
SREBF1-219ENST00000580540 BAXQ07812 192 aa12.04□□□□□ -0.48
SREBF1-219ENST00000580540 MIC13Q5XKP0 118 aa12.04□□□□□ -0.48
SREBF1-219ENST00000580540 Q6ZRG5 221 aa12.04□□□□□ -0.48
SREBF1-219ENST00000580540 ZNF738Q8NE65 137 aa12.04□□□□□ -0.48
SREBF1-219ENST00000580540 DNAH1Q9P2D7 4330 aa12.04□□□□□ -0.48
SREBF1-219ENST00000580540 TRAV8-2A0A0B4J237 113 aa12.03□□□□□ -0.48
SREBF1-219ENST00000580540 SSNA1O43805 119 aa12.03□□□□□ -0.48
SREBF1-219ENST00000580540 ZNF705DP0CH99 300 aaPredicted RBP12.03□□□□□ -0.48
SREBF1-219ENST00000580540 ZNF705BP0CI00 300 aaPredicted RBP12.03□□□□□ -0.48
SREBF1-219ENST00000580540 C10orf113Q5VZT2 155 aa12.03□□□□□ -0.48
SREBF1-219ENST00000580540 RNF24Q9Y225 148 aa12.03□□□□□ -0.48
SREBF1-219ENST00000580540 WDR83OSQ9Y284 106 aa12.03□□□□□ -0.48
SREBF1-219ENST00000580540 ELOA3CA0A087WX78 387 aaPredicted RBP12.02□□□□□ -0.49
SREBF1-219ENST00000580540 LY6G6CO95867 125 aa12.02□□□□□ -0.49
SREBF1-219ENST00000580540 PRB4P10163 310 aaPredicted RBP12.02□□□□□ -0.49
SREBF1-219ENST00000580540 FGF7P21781 194 aa12.02□□□□□ -0.49
SREBF1-219ENST00000580540 HLA-DMBP28068 263 aa12.02□□□□□ -0.49
SREBF1-219ENST00000580540 ZNF709Q8N972 641 aa12.02□□□□□ -0.49
SREBF1-219ENST00000580540 TMEM37Q8WXS4 190 aa12.02□□□□□ -0.49
SREBF1-219ENST00000580540 MARVELD1Q9BSK0 173 aa12.02□□□□□ -0.49
SREBF1-219ENST00000580540 NMES1Q9C002 83 aa12.02□□□□□ -0.49
SREBF1-219ENST00000580540 DNAJC4Q9NNZ3 241 aa12.02□□□□□ -0.49
SREBF1-219ENST00000580540 A0A087X0K7 114 aa12.01□□□□□ -0.49
SREBF1-219ENST00000580540 DUSP14O95147 198 aaKnown RBP12.01□□□□□ -0.49
SREBF1-219ENST00000580540 CYCSP99999 105 aaKnown RBP12.01□□□□□ -0.49
SREBF1-219ENST00000580540 ATP6V1FQ16864 119 aa12.01□□□□□ -0.49
SREBF1-219ENST00000580540 CLUHP3Q96NS8 147 aa12.01□□□□□ -0.49
SREBF1-219ENST00000580540 OR5AC2Q9NZP5 309 aa12.01□□□□□ -0.49
SREBF1-219ENST00000580540 HYDINQ4G0P3 5121 aa12.01□□□□□ -0.49
SREBF1-219ENST00000580540 E5RGE8 158 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms