RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 SMIM27A0A1W2PRY6 76 aa16.07■□□□□ 0.16
SMPDL3A-203ENST00000539041 XKRY2A2RUG3 117 aa16.07■□□□□ 0.16
SMPDL3A-203ENST00000539041 LTAP01374 205 aa16.07■□□□□ 0.16
SMPDL3A-203ENST00000539041 GPR183P32249 361 aa16.07■□□□□ 0.16
SMPDL3A-203ENST00000539041 COA6Q5JTJ3 125 aaKnown RBP16.07■□□□□ 0.16
SMPDL3A-203ENST00000539041 TMEM183AQ8IXX5 376 aa16.07■□□□□ 0.16
SMPDL3A-203ENST00000539041 ZNF414Q96IQ9 312 aa16.07■□□□□ 0.16
SMPDL3A-203ENST00000539041 C17orf77Q96MU5 243 aa16.07■□□□□ 0.16
SMPDL3A-203ENST00000539041 RABAC1Q9UI14 185 aa16.07■□□□□ 0.16
SMPDL3A-203ENST00000539041 SIGLEC15Q6ZMC9 328 aa16.06■□□□□ 0.16
SMPDL3A-203ENST00000539041 NUDT10Q8NFP7 164 aa16.06■□□□□ 0.16
SMPDL3A-203ENST00000539041 EEF1AKMT3Q96AZ1 226 aa16.06■□□□□ 0.16
SMPDL3A-203ENST00000539041 MBD6Q96DN6 1003 aa16.06■□□□□ 0.16
SMPDL3A-203ENST00000539041 NUDT11Q96G61 164 aa16.06■□□□□ 0.16
SMPDL3A-203ENST00000539041 MLST8Q9BVC4 326 aa16.06■□□□□ 0.16
SMPDL3A-203ENST00000539041 SOX21Q9Y651 276 aaPredicted RBP16.06■□□□□ 0.16
SMPDL3A-203ENST00000539041 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.06■□□□□ 0.16
SMPDL3A-203ENST00000539041 TRAV41A0A0B4J266 112 aa16.05■□□□□ 0.16
SMPDL3A-203ENST00000539041 A6NDX4 124 aa16.05■□□□□ 0.16
SMPDL3A-203ENST00000539041 S100A7P31151 101 aa16.05■□□□□ 0.16
SMPDL3A-203ENST00000539041 PDE6HQ13956 83 aa16.05■□□□□ 0.16
SMPDL3A-203ENST00000539041 C19orf54Q5BKX5 351 aa16.05■□□□□ 0.16
SMPDL3A-203ENST00000539041 PDZD11Q5EBL8 140 aa16.05■□□□□ 0.16
SMPDL3A-203ENST00000539041 PRR27Q6MZM9 219 aa16.05■□□□□ 0.16
SMPDL3A-203ENST00000539041 GRAMD2BQ96HH9 432 aa16.05■□□□□ 0.16
SMPDL3A-203ENST00000539041 H3BUX3 64 aa16.05■□□□□ 0.16
SMPDL3A-203ENST00000539041 BMPR1BO00238 502 aa16.05■□□□□ 0.16
SMPDL3A-203ENST00000539041 LY6EQ16553 131 aa16.05■□□□□ 0.16
SMPDL3A-203ENST00000539041 Q86TA4 180 aa16.05■□□□□ 0.16
SMPDL3A-203ENST00000539041 LINC01356Q8N9X3 169 aa16.05■□□□□ 0.16
SMPDL3A-203ENST00000539041 A0A096LNT2 108 aa16.04■□□□□ 0.16
SMPDL3A-203ENST00000539041 TRBV6-1A0A0K0K1D8 114 aa16.04■□□□□ 0.16
SMPDL3A-203ENST00000539041 CBLN1P23435 193 aa16.04■□□□□ 0.16
SMPDL3A-203ENST00000539041 TCL1AP56279 114 aa16.04■□□□□ 0.16
SMPDL3A-203ENST00000539041 COX19Q49B96 90 aa16.04■□□□□ 0.16
SMPDL3A-203ENST00000539041 C9orf152Q5JTZ5 239 aa16.04■□□□□ 0.16
SMPDL3A-203ENST00000539041 GOLT1AQ6ZVE7 132 aa16.04■□□□□ 0.16
SMPDL3A-203ENST00000539041 CCDC140Q96MF4 163 aa16.04■□□□□ 0.16
SMPDL3A-203ENST00000539041 MS4A10Q96PG2 267 aa16.04■□□□□ 0.16
SMPDL3A-203ENST00000539041 ZNF492Q9P255 531 aa16.04■□□□□ 0.16
SMPDL3A-203ENST00000539041 CR1P17927 2039 aa16.03■□□□□ 0.16
SMPDL3A-203ENST00000539041 TRBV7-1A0A0A6YYK4 115 aa16.03■□□□□ 0.16
SMPDL3A-203ENST00000539041 IZUMO1RA6ND01 250 aa16.03■□□□□ 0.16
SMPDL3A-203ENST00000539041 AVPP01185 164 aa16.03■□□□□ 0.16
SMPDL3A-203ENST00000539041 RPL7P18124 248 aaKnown RBP16.03■□□□□ 0.16
SMPDL3A-203ENST00000539041 IER3P46695 156 aa16.03■□□□□ 0.16
SMPDL3A-203ENST00000539041 MRPL18Q9H0U6 180 aaKnown RBP16.03■□□□□ 0.16
SMPDL3A-203ENST00000539041 ZNF462Q96JM2 2506 aa16.03■□□□□ 0.16
SMPDL3A-203ENST00000539041 MYO18BQ8IUG5 2567 aa16.03■□□□□ 0.16
SMPDL3A-203ENST00000539041 CLEC3BP05452 202 aa16.03■□□□□ 0.16
SMPDL3A-203ENST00000539041 GNB1LQ9BYB4 327 aa16.03■□□□□ 0.16
SMPDL3A-203ENST00000539041 ZFAND3Q9H8U3 227 aa16.03■□□□□ 0.16
SMPDL3A-203ENST00000539041 ASH1LQ9NR48 2969 aaKnown RBP16.02■□□□□ 0.16
SMPDL3A-203ENST00000539041 SNURFLB1AK76 121 aa16.02■□□□□ 0.15
SMPDL3A-203ENST00000539041 CA1P00915 261 aaPredicted RBP16.02■□□□□ 0.15
SMPDL3A-203ENST00000539041 WDR73Q6P4I2 378 aa16.02■□□□□ 0.15
SMPDL3A-203ENST00000539041 TOMM20LQ6UXN7 152 aa16.02■□□□□ 0.15
SMPDL3A-203ENST00000539041 CLEC19AQ6UXS0 136 aa16.02■□□□□ 0.15
SMPDL3A-203ENST00000539041 TMEM75Q8N9X5 138 aa16.02■□□□□ 0.15
SMPDL3A-203ENST00000539041 AAMDCQ9H7C9 122 aa16.02■□□□□ 0.15
SMPDL3A-203ENST00000539041 SPG11Q96JI7 2443 aa16.02■□□□□ 0.15
SMPDL3A-203ENST00000539041 K7EQM0 130 aa16.01■□□□□ 0.15
SMPDL3A-203ENST00000539041 M0QZK8 103 aa16.01■□□□□ 0.15
SMPDL3A-203ENST00000539041 IGLV2-11P01706 119 aa16.01■□□□□ 0.15
SMPDL3A-203ENST00000539041 FABP4P15090 132 aa16.01■□□□□ 0.15
SMPDL3A-203ENST00000539041 PSG9Q00887 426 aa16.01■□□□□ 0.15
SMPDL3A-203ENST00000539041 ATP5G2Q06055 141 aa16.01■□□□□ 0.15
SMPDL3A-203ENST00000539041 OR10D4PQ8NGN7 298 aa16.01■□□□□ 0.15
SMPDL3A-203ENST00000539041 GNB4Q9HAV0 340 aa16.01■□□□□ 0.15
SMPDL3A-203ENST00000539041 TRAV8-1A0A0A6YYK1 113 aa16■□□□□ 0.15
SMPDL3A-203ENST00000539041 FAM223BA6NKX1 122 aa16■□□□□ 0.15
SMPDL3A-203ENST00000539041 SPINK4O60575 86 aa16■□□□□ 0.15
SMPDL3A-203ENST00000539041 MT-ND6P03923 174 aa16■□□□□ 0.15
SMPDL3A-203ENST00000539041 FRMD6-AS1P0C7T7 363 aa16■□□□□ 0.15
SMPDL3A-203ENST00000539041 PRNTQ86SH4 94 aa16■□□□□ 0.15
SMPDL3A-203ENST00000539041 FAM223AQ8IWN6 122 aa16■□□□□ 0.15
SMPDL3A-203ENST00000539041 ATP6V0BQ99437 205 aa16■□□□□ 0.15
SMPDL3A-203ENST00000539041 LINC00527Q9UJ94 153 aa16■□□□□ 0.15
SMPDL3A-203ENST00000539041 ZFYVE26Q68DK2 2539 aa16■□□□□ 0.15
SMPDL3A-203ENST00000539041 COL12A1Q99715 3063 aa16■□□□□ 0.15
SMPDL3A-203ENST00000539041 IGHV3-35A0A0C4DH35 117 aa16■□□□□ 0.15
SMPDL3A-203ENST00000539041 IGHG2P01859 326 aa16■□□□□ 0.15
SMPDL3A-203ENST00000539041 IGF1P05019 195 aa16■□□□□ 0.15
SMPDL3A-203ENST00000539041 UBR5O95071 2799 aaPredicted RBP15.99■□□□□ 0.15
SMPDL3A-203ENST00000539041 ANKRD17O75179 2603 aaKnown RBP15.99■□□□□ 0.15
SMPDL3A-203ENST00000539041 C19orf71A6NCJ1 209 aa15.99■□□□□ 0.15
SMPDL3A-203ENST00000539041 DIRC3C9JPN6 131 aa15.99■□□□□ 0.15
SMPDL3A-203ENST00000539041 J3QLI3 93 aa15.99■□□□□ 0.15
SMPDL3A-203ENST00000539041 SLC35B1P78383 322 aa15.99■□□□□ 0.15
SMPDL3A-203ENST00000539041 TSKUQ8WUA8 353 aa15.99■□□□□ 0.15
SMPDL3A-203ENST00000539041 HIST1H2BLQ99880 126 aa15.99■□□□□ 0.15
SMPDL3A-203ENST00000539041 RPP21Q9H633 154 aaKnown RBP15.99■□□□□ 0.15
SMPDL3A-203ENST00000539041 PCP4L1A6NKN8 68 aa15.98■□□□□ 0.15
SMPDL3A-203ENST00000539041 RAB9AP51151 201 aa15.98■□□□□ 0.15
SMPDL3A-203ENST00000539041 MRPL54Q6P161 138 aaKnown RBP15.98■□□□□ 0.15
SMPDL3A-203ENST00000539041 LINC00322Q6ZN03 302 aaPredicted RBP15.98■□□□□ 0.15
SMPDL3A-203ENST00000539041 TMEM136Q6ZRR5 245 aa15.98■□□□□ 0.15
SMPDL3A-203ENST00000539041 PRSS22Q9GZN4 317 aa15.98■□□□□ 0.15
SMPDL3A-203ENST00000539041 BEX4Q9NWD9 120 aaPredicted RBP15.98■□□□□ 0.15
SMPDL3A-203ENST00000539041 NAT8BQ9UHF3 227 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms