RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 GVINP1Q7Z2Y8 2422 aa15.42■□□□□ 0.06
PCF11-203ENST00000530304 CHCHD1Q96BP2 118 aaKnown RBP15.42■□□□□ 0.06
PCF11-203ENST00000530304 IGHV1-24A0A0C4DH33 117 aa15.42■□□□□ 0.06
PCF11-203ENST00000530304 C20orf202A1L168 122 aa15.42■□□□□ 0.06
PCF11-203ENST00000530304 LY6LH3BQJ8 138 aa15.42■□□□□ 0.06
PCF11-203ENST00000530304 CHEK1O14757 476 aa15.42■□□□□ 0.06
PCF11-203ENST00000530304 CNIH1O95406 144 aa15.42■□□□□ 0.06
PCF11-203ENST00000530304 HOXB4P17483 251 aaPredicted RBP15.42■□□□□ 0.06
PCF11-203ENST00000530304 MRPS16Q9Y3D3 137 aaKnown RBP15.42■□□□□ 0.06
PCF11-203ENST00000530304 TACC2O95359 2948 aa15.42■□□□□ 0.06
PCF11-203ENST00000530304 LOC102724200A0A096LPH7 203 aaPredicted RBP15.41■□□□□ 0.06
PCF11-203ENST00000530304 C17orf77Q96MU5 243 aa15.41■□□□□ 0.06
PCF11-203ENST00000530304 RNF5Q99942 180 aa15.41■□□□□ 0.06
PCF11-203ENST00000530304 NDFIP1Q9BT67 221 aa15.41■□□□□ 0.06
PCF11-203ENST00000530304 NDUFB8O95169 186 aa15.41■□□□□ 0.06
PCF11-203ENST00000530304 APOHP02749 345 aaPredicted RBP15.41■□□□□ 0.06
PCF11-203ENST00000530304 LINC00614P0C842 121 aa15.41■□□□□ 0.06
PCF11-203ENST00000530304 ZFHX2Q9C0A1 2572 aaPredicted RBP15.4■□□□□ 0.06
PCF11-203ENST00000530304 ZNF785A8K8V0 405 aa15.4■□□□□ 0.06
PCF11-203ENST00000530304 K7EIM0 57 aa15.4■□□□□ 0.06
PCF11-203ENST00000530304 HAX1O00165 279 aa15.4■□□□□ 0.06
PCF11-203ENST00000530304 CRXO43186 299 aaPredicted RBP15.4■□□□□ 0.06
PCF11-203ENST00000530304 LDLRAD2Q5SZI1 272 aa15.4■□□□□ 0.06
PCF11-203ENST00000530304 TRBV19A0A075B6N1 114 aa15.4■□□□□ 0.06
PCF11-203ENST00000530304 C16orf54Q6UWD8 224 aa15.4■□□□□ 0.06
PCF11-203ENST00000530304 LINC00173Q6ZV60 143 aa15.4■□□□□ 0.06
PCF11-203ENST00000530304 TIMM23O14925 209 aa15.39■□□□□ 0.05
PCF11-203ENST00000530304 HINT1P49773 126 aaPredicted RBP15.39■□□□□ 0.05
PCF11-203ENST00000530304 BPIFA4PQ86YQ2 179 aa15.39■□□□□ 0.05
PCF11-203ENST00000530304 MUC15Q8N387 334 aa15.39■□□□□ 0.05
PCF11-203ENST00000530304 LINC01560Q8TB33 94 aa15.39■□□□□ 0.05
PCF11-203ENST00000530304 SHANK2-AS3Q9BTD1 123 aa15.39■□□□□ 0.05
PCF11-203ENST00000530304 SCNM1Q9BWG6 230 aa15.39■□□□□ 0.05
PCF11-203ENST00000530304 ONECUT1Q9UBC0 465 aa15.39■□□□□ 0.05
PCF11-203ENST00000530304 OVOL3O00110 214 aa15.39■□□□□ 0.05
PCF11-203ENST00000530304 LEPROTL1O95214 131 aa15.39■□□□□ 0.05
PCF11-203ENST00000530304 ZC2HC1AQ96GY0 325 aa15.39■□□□□ 0.05
PCF11-203ENST00000530304 SRSF8Q9BRL6 282 aaKnown RBP15.39■□□□□ 0.05
PCF11-203ENST00000530304 PRB4P10163 310 aaPredicted RBP15.38■□□□□ 0.05
PCF11-203ENST00000530304 ASCL2Q99929 193 aa15.38■□□□□ 0.05
PCF11-203ENST00000530304 TRBV6-1A0A0K0K1D8 114 aa15.38■□□□□ 0.05
PCF11-203ENST00000530304 OR4C46A6NHA9 309 aa15.38■□□□□ 0.05
PCF11-203ENST00000530304 SYS1-DBNDD2H3BUS1 97 aa15.38■□□□□ 0.05
PCF11-203ENST00000530304 OR4F17Q8NGA8 305 aa15.38■□□□□ 0.05
PCF11-203ENST00000530304 PPP1R14DQ9NXH3 145 aa15.38■□□□□ 0.05
PCF11-203ENST00000530304 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.37■□□□□ 0.05
PCF11-203ENST00000530304 H3BRN7 92 aa15.37■□□□□ 0.05
PCF11-203ENST00000530304 SIAH2O43255 324 aa15.37■□□□□ 0.05
PCF11-203ENST00000530304 ZNF138P52744 262 aa15.37■□□□□ 0.05
PCF11-203ENST00000530304 ZNF491Q8N8L2 437 aa15.37■□□□□ 0.05
PCF11-203ENST00000530304 TMEM75Q8N9X5 138 aa15.37■□□□□ 0.05
PCF11-203ENST00000530304 SFTPCP11686 197 aa15.37■□□□□ 0.05
PCF11-203ENST00000530304 SIGLEC15Q6ZMC9 328 aa15.37■□□□□ 0.05
PCF11-203ENST00000530304 C1RLQ9NZP8 487 aa15.37■□□□□ 0.05
PCF11-203ENST00000530304 RELQ04864 619 aaPredicted RBP15.36■□□□□ 0.05
PCF11-203ENST00000530304 DMRTA1Q5VZB9 504 aa15.36■□□□□ 0.05
PCF11-203ENST00000530304 RNF24Q9Y225 148 aa15.36■□□□□ 0.05
PCF11-203ENST00000530304 IL4P05112 153 aa15.36■□□□□ 0.05
PCF11-203ENST00000530304 ZNF672Q499Z4 452 aaPredicted RBP15.36■□□□□ 0.05
PCF11-203ENST00000530304 VKORC1Q9BQB6 163 aa15.36■□□□□ 0.05
PCF11-203ENST00000530304 RNF125Q96EQ8 232 aa15.35■□□□□ 0.05
PCF11-203ENST00000530304 PSG8Q9UQ74 426 aa15.35■□□□□ 0.05
PCF11-203ENST00000530304 HILPDAQ9Y5L2 63 aa15.35■□□□□ 0.05
PCF11-203ENST00000530304 A0A1B0GUT8 65 aa15.35■□□□□ 0.05
PCF11-203ENST00000530304 LIPFP07098 398 aa15.35■□□□□ 0.05
PCF11-203ENST00000530304 ARMS2P0C7Q2 107 aa15.35■□□□□ 0.05
PCF11-203ENST00000530304 HTR1DP28221 377 aa15.35■□□□□ 0.05
PCF11-203ENST00000530304 IGFBPL1Q8WX77 278 aa15.35■□□□□ 0.05
PCF11-203ENST00000530304 NBR2O15453 112 aa15.34■□□□□ 0.05
PCF11-203ENST00000530304 HLA-DRB1P01911 266 aa15.34■□□□□ 0.05
PCF11-203ENST00000530304 PSG3Q16557 428 aa15.34■□□□□ 0.05
PCF11-203ENST00000530304 KLF17Q5JT82 389 aaPredicted RBP15.34■□□□□ 0.05
PCF11-203ENST00000530304 LYPD1Q8N2G4 141 aa15.34■□□□□ 0.05
PCF11-203ENST00000530304 S4R3C0 116 aa15.34■□□□□ 0.05
PCF11-203ENST00000530304 TPRP12270 2363 aaKnown RBP15.34■□□□□ 0.05
PCF11-203ENST00000530304 CSMD1Q96PZ7 3565 aa15.34■□□□□ 0.05
PCF11-203ENST00000530304 K7EQM0 130 aa15.34■□□□□ 0.05
PCF11-203ENST00000530304 FCGR2BP31994 310 aaPredicted RBP15.34■□□□□ 0.05
PCF11-203ENST00000530304 LY6G5BQ8NDX9 201 aa15.34■□□□□ 0.05
PCF11-203ENST00000530304 ZNF414Q96IQ9 312 aa15.34■□□□□ 0.05
PCF11-203ENST00000530304 LRBAP50851 2863 aa15.34■□□□□ 0.05
PCF11-203ENST00000530304 MRPS12O15235 138 aaKnown RBP15.33■□□□□ 0.05
PCF11-203ENST00000530304 CRIP1P50238 77 aa15.33■□□□□ 0.05
PCF11-203ENST00000530304 ARF6P62330 175 aa15.33■□□□□ 0.05
PCF11-203ENST00000530304 OR5AL1P0C617 328 aa15.33■□□□□ 0.04
PCF11-203ENST00000530304 TMUB1Q9BVT8 246 aa15.33■□□□□ 0.04
PCF11-203ENST00000530304 DPM3Q9P2X0 92 aa15.33■□□□□ 0.04
PCF11-203ENST00000530304 hDV102S1A0JD36 115 aa15.32■□□□□ 0.04
PCF11-203ENST00000530304 CSN3P07498 182 aa15.32■□□□□ 0.04
PCF11-203ENST00000530304 GRNP28799 593 aaKnown RBP15.32■□□□□ 0.04
PCF11-203ENST00000530304 RIGQ13278 110 aa15.32■□□□□ 0.04
PCF11-203ENST00000530304 ORAOV1Q8WV07 137 aa15.32■□□□□ 0.04
PCF11-203ENST00000530304 TMEM190Q8WZ59 177 aa15.32■□□□□ 0.04
PCF11-203ENST00000530304 ST20Q9HBF5 79 aa15.32■□□□□ 0.04
PCF11-203ENST00000530304 TP73-AS1Q9UF72 201 aa15.32■□□□□ 0.04
PCF11-203ENST00000530304 DCHS2Q6V1P9 2916 aa15.32■□□□□ 0.04
PCF11-203ENST00000530304 WI2-2373I1.2A0A1W2PRP0 233 aa15.32■□□□□ 0.04
PCF11-203ENST00000530304 M0R3E3 92 aa15.32■□□□□ 0.04
PCF11-203ENST00000530304 LY6HO94772 140 aa15.32■□□□□ 0.04
PCF11-203ENST00000530304 UNQ5815/PRO19632Q6UWF5 114 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms