RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 PRRG2O14669 202 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 IGKCP01834 107 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 FGF1P05230 155 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 VSIG8P0DPA2 414 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 HBG1P69891 147 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 PAX8Q06710 450 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 TRIP12Q14669 1992 aaPredicted RBP5.67□□□□□ -1.5
NIPBL-208ENST00000514335 MUC3AQ02505 3323 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 A1L4Q6 167 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 TIMM23O14925 209 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 GASTP01350 101 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 APCSP02743 223 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 EFNA4P52798 201 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 MORN3Q6PF18 240 aaPredicted RBP5.67□□□□□ -1.5
NIPBL-208ENST00000514335 ZNF793Q6ZN11 406 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 AMN1Q8IY45 258 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 PTPRZ1P23471 2315 aaPredicted RBP5.67□□□□□ -1.5
NIPBL-208ENST00000514335 TECTAO75443 2155 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 TRAV12-2A0A075B6T6 113 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 TRBV7-7A0A0K0K1E9 115 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 H3BT86 120 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 SNRPD3P62318 126 aaKnown RBP5.67□□□□□ -1.5
NIPBL-208ENST00000514335 CDK5R1Q15078 307 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 MLANAQ16655 118 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 DGAT2L6Q6ZPD8 337 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 OR52N5Q8NH56 324 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 TMEM255BQ8WV15 326 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 AAMDCQ9H7C9 122 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 ANAPC10Q9UM13 185 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 FAM186AA6NE01 2351 aa5.67□□□□□ -1.5
NIPBL-208ENST00000514335 TDRD6O60522 2096 aaKnown RBP5.66□□□□□ -1.5
NIPBL-208ENST00000514335 TRAV2A0A0B4J234 112 aa5.66□□□□□ -1.5
NIPBL-208ENST00000514335 SYNGR2O43760 224 aa5.66□□□□□ -1.5
NIPBL-208ENST00000514335 LMO2P25791 158 aa5.66□□□□□ -1.5
NIPBL-208ENST00000514335 NHP2Q9NX24 153 aaKnown RBP5.66□□□□□ -1.5
NIPBL-208ENST00000514335 CHD8Q9HCK8 2581 aa5.66□□□□□ -1.5
NIPBL-208ENST00000514335 A0A1B0GXF2 115 aa5.66□□□□□ -1.5
NIPBL-208ENST00000514335 SNURFLB1AK76 121 aa5.66□□□□□ -1.5
NIPBL-208ENST00000514335 LGALS9O00182 355 aa5.66□□□□□ -1.5
NIPBL-208ENST00000514335 FRMD6-AS1P0C7T7 363 aa5.66□□□□□ -1.5
NIPBL-208ENST00000514335 CRYGSP22914 178 aa5.66□□□□□ -1.5
NIPBL-208ENST00000514335 HES3Q5TGS1 186 aa5.66□□□□□ -1.5
NIPBL-208ENST00000514335 WDR86Q86TI4 376 aa5.66□□□□□ -1.5
NIPBL-208ENST00000514335 NCOA6Q14686 2063 aaPredicted RBP5.66□□□□□ -1.5
NIPBL-208ENST00000514335 PCNX3Q9H6A9 2034 aa5.66□□□□□ -1.5
NIPBL-208ENST00000514335 WISP2O76076 250 aa5.65□□□□□ -1.5
NIPBL-208ENST00000514335 RPL11P62913 178 aaKnown RBP5.65□□□□□ -1.5
NIPBL-208ENST00000514335 EFEMP1Q12805 493 aa5.65□□□□□ -1.5
NIPBL-208ENST00000514335 C19orf25Q9UFG5 118 aaPredicted RBP5.65□□□□□ -1.5
NIPBL-208ENST00000514335 KLF13Q9Y2Y9 288 aaPredicted RBP5.65□□□□□ -1.5
NIPBL-208ENST00000514335 ADAMTS20P59510 1910 aa5.65□□□□□ -1.5
NIPBL-208ENST00000514335 ANAPC1Q9H1A4 1944 aa5.65□□□□□ -1.5
NIPBL-208ENST00000514335 SCN3AQ9NY46 2000 aa5.65□□□□□ -1.5
NIPBL-208ENST00000514335 ARHGAP21Q5T5U3 1957 aa5.65□□□□□ -1.5
NIPBL-208ENST00000514335 EML6Q6ZMW3 1958 aa5.65□□□□□ -1.5
NIPBL-208ENST00000514335 OBSL1O75147 1896 aa5.65□□□□□ -1.51
NIPBL-208ENST00000514335 MYO16Q9Y6X6 1858 aa5.65□□□□□ -1.51
NIPBL-208ENST00000514335 IRGMA1A4Y4 181 aa5.65□□□□□ -1.51
NIPBL-208ENST00000514335 C10orf142B7Z368 130 aa5.65□□□□□ -1.51
NIPBL-208ENST00000514335 FGF13Q92913 245 aa5.65□□□□□ -1.51
NIPBL-208ENST00000514335 TRAV1-2A0A0B4J238 106 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 CEBPZOSA8MTT3 80 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 LINC01565O15544 149 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 SLC25A16P16260 332 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 RPL18AQ02543 176 aaKnown RBP5.64□□□□□ -1.51
NIPBL-208ENST00000514335 ECSCRQ19T08 205 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 LGALS9BQ3B8N2 356 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 LINC00305Q7Z4B0 112 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 C6orf223Q8N319 242 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 NUP35Q8NFH5 326 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 C2orf50Q96LR7 162 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 KXD1Q9BQD3 176 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 PRR13Q9NZ81 148 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 K7EMI3 77 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 NSUN5P1Q3KNT7 163 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 BCL6BQ8N143 479 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-208ENST00000514335 TRBV5-3A0A0A0MS03 114 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 TMEM202A6NGA9 273 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 IGLV3-19P01714 112 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 HLA-DMBP28068 263 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 CACNG7P62955 275 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 CENPWQ5EE01 88 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 ZNF678Q5SXM1 525 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 MIC13Q5XKP0 118 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 LRRC29Q8WV35 223 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 FGF11Q92914 225 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 TSACCQ96A04 125 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-208ENST00000514335 EPG5Q9HCE0 2579 aa5.64□□□□□ -1.51
NIPBL-208ENST00000514335 EYSQ5T1H1 3165 aa5.63□□□□□ -1.51
NIPBL-208ENST00000514335 GYPBP06028 91 aa5.63□□□□□ -1.51
NIPBL-208ENST00000514335 NPC2P61916 151 aa5.63□□□□□ -1.51
NIPBL-208ENST00000514335 WDR38Q5JTN6 314 aa5.63□□□□□ -1.51
NIPBL-208ENST00000514335 RFLNBQ8N5W9 214 aa5.63□□□□□ -1.51
NIPBL-208ENST00000514335 PCSK5Q92824 1860 aa5.63□□□□□ -1.51
NIPBL-208ENST00000514335 TM2D3Q9BRN9 247 aa5.63□□□□□ -1.51
NIPBL-208ENST00000514335 HEATR1Q9H583 2144 aaKnown RBP5.63□□□□□ -1.51
NIPBL-208ENST00000514335 SMIM26A0A096LP01 95 aa5.63□□□□□ -1.51
NIPBL-208ENST00000514335 A0A1B0GTL3 188 aa5.63□□□□□ -1.51
NIPBL-208ENST00000514335 CRYBA2P53672 197 aa5.63□□□□□ -1.51
NIPBL-208ENST00000514335 HERVK_113P61574 105 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 268.4 ms