RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 SNRPD3P62318 126 aaKnown RBP10.61□□□□□ -0.71
SF3A2-204ENST00000589118 SRPXP78539 464 aa10.61□□□□□ -0.71
SF3A2-204ENST00000589118 TMEM128Q5BJH2 165 aa10.61□□□□□ -0.71
SF3A2-204ENST00000589118 TMEM268Q5VZI3 342 aa10.61□□□□□ -0.71
SF3A2-204ENST00000589118 ZNF709Q8N972 641 aa10.61□□□□□ -0.71
SF3A2-204ENST00000589118 OR4B1Q8NGF8 309 aa10.61□□□□□ -0.71
SF3A2-204ENST00000589118 SDHCQ99643 169 aaPredicted RBP10.61□□□□□ -0.71
SF3A2-204ENST00000589118 ATG101Q9BSB4 218 aa10.61□□□□□ -0.71
SF3A2-204ENST00000589118 PDCD10Q9BUL8 212 aa10.61□□□□□ -0.71
SF3A2-204ENST00000589118 NRN1Q9NPD7 142 aa10.61□□□□□ -0.71
SF3A2-204ENST00000589118 SHPKQ9UHJ6 478 aa10.61□□□□□ -0.71
SF3A2-204ENST00000589118 NAP1L6A6NFF2 107 aa10.6□□□□□ -0.71
SF3A2-204ENST00000589118 SMIM9A6NGZ8 99 aa10.6□□□□□ -0.71
SF3A2-204ENST00000589118 CENPXA8MT69 81 aa10.6□□□□□ -0.71
SF3A2-204ENST00000589118 NXPH3O95157 252 aa10.6□□□□□ -0.71
SF3A2-204ENST00000589118 IL4P05112 153 aa10.6□□□□□ -0.71
SF3A2-204ENST00000589118 ANXA3P12429 323 aa10.6□□□□□ -0.71
SF3A2-204ENST00000589118 EIF2B2P49770 351 aaKnown RBP10.6□□□□□ -0.71
SF3A2-204ENST00000589118 RND2P52198 227 aa10.6□□□□□ -0.71
SF3A2-204ENST00000589118 SPCS3P61009 180 aa10.6□□□□□ -0.71
SF3A2-204ENST00000589118 DAD1P61803 113 aa10.6□□□□□ -0.71
SF3A2-204ENST00000589118 BAK1Q16611 211 aa10.6□□□□□ -0.71
SF3A2-204ENST00000589118 NMSQ5H8A3 153 aa10.6□□□□□ -0.71
SF3A2-204ENST00000589118 SIGLEC15Q6ZMC9 328 aa10.6□□□□□ -0.71
SF3A2-204ENST00000589118 Q8WTZ3 238 aa10.6□□□□□ -0.71
SF3A2-204ENST00000589118 GPR146Q96CH1 333 aa10.6□□□□□ -0.71
SF3A2-204ENST00000589118 DUXBA0A1W2PPF3 345 aa10.59□□□□□ -0.71
SF3A2-204ENST00000589118 RPS10-NUDT3A0A1W2PQS6 291 aa10.59□□□□□ -0.71
SF3A2-204ENST00000589118 CORTO00230 105 aa10.59□□□□□ -0.71
SF3A2-204ENST00000589118 BUB3O43684 328 aa10.59□□□□□ -0.71
SF3A2-204ENST00000589118 NUDT3O95989 172 aa10.59□□□□□ -0.71
SF3A2-204ENST00000589118 AKR1C4P17516 323 aa10.59□□□□□ -0.71
SF3A2-204ENST00000589118 FUSP35637 526 aaKnown RBP eCLIP10.59□□□□□ -0.71
SF3A2-204ENST00000589118 AP2S1P53680 142 aaPredicted RBP10.59□□□□□ -0.71
SF3A2-204ENST00000589118 SUB1P53999 127 aaKnown RBP eCLIP10.59□□□□□ -0.71
SF3A2-204ENST00000589118 FCN2Q15485 313 aa10.59□□□□□ -0.71
SF3A2-204ENST00000589118 PRSS54Q6PEW0 395 aa10.59□□□□□ -0.71
SF3A2-204ENST00000589118 LRTM2Q8N967 370 aa10.59□□□□□ -0.71
SF3A2-204ENST00000589118 RNASE11Q8TAA1 199 aaKnown RBP10.59□□□□□ -0.71
SF3A2-204ENST00000589118 C7orf50Q9BRJ6 194 aaKnown RBP10.59□□□□□ -0.71
SF3A2-204ENST00000589118 CACNG5Q9UF02 275 aa10.59□□□□□ -0.71
SF3A2-204ENST00000589118 OR10J1P30954 320 aa10.58□□□□□ -0.72
SF3A2-204ENST00000589118 NKX2-1P43699 371 aaPredicted RBP10.58□□□□□ -0.72
SF3A2-204ENST00000589118 UBE2MP61081 183 aaKnown RBP10.58□□□□□ -0.72
SF3A2-204ENST00000589118 DLK1P80370 383 aa10.58□□□□□ -0.72
SF3A2-204ENST00000589118 LGI3Q8N145 548 aa10.58□□□□□ -0.72
SF3A2-204ENST00000589118 SAV1Q9H4B6 383 aaPredicted RBP10.58□□□□□ -0.72
SF3A2-204ENST00000589118 FAT1Q14517 4588 aa10.57□□□□□ -0.72
SF3A2-204ENST00000589118 TRAV30A0A087WSZ9 112 aa10.57□□□□□ -0.72
SF3A2-204ENST00000589118 LINC00854A0A1B0GVQ3 168 aa10.57□□□□□ -0.72
SF3A2-204ENST00000589118 UPK1BO75841 260 aa10.57□□□□□ -0.72
SF3A2-204ENST00000589118 HBE1P02100 147 aa10.57□□□□□ -0.72
SF3A2-204ENST00000589118 SULT1A3P0DMM9 295 aa10.57□□□□□ -0.72
SF3A2-204ENST00000589118 SULT1A4P0DMN0 295 aa10.57□□□□□ -0.72
SF3A2-204ENST00000589118 CCR6P51684 374 aa10.57□□□□□ -0.72
SF3A2-204ENST00000589118 OXA1LQ15070 435 aa10.57□□□□□ -0.72
SF3A2-204ENST00000589118 C2orf83Q53S99 150 aa10.57□□□□□ -0.72
SF3A2-204ENST00000589118 OR51G1Q8NGK1 321 aa10.57□□□□□ -0.72
SF3A2-204ENST00000589118 OR1S2Q8NGQ3 325 aa10.57□□□□□ -0.72
SF3A2-204ENST00000589118 TMEM170AQ8WVE7 144 aa10.57□□□□□ -0.72
SF3A2-204ENST00000589118 NPIPB3Q92617 1050 aa10.57□□□□□ -0.72
SF3A2-204ENST00000589118 KRTAP1-5Q9BYS1 174 aa10.57□□□□□ -0.72
SF3A2-204ENST00000589118 ENY2Q9NPA8 101 aa10.57□□□□□ -0.72
SF3A2-204ENST00000589118 HSPB7Q9UBY9 170 aa10.57□□□□□ -0.72
SF3A2-204ENST00000589118 LINC00588Q9Y4M8 146 aa10.57□□□□□ -0.72
SF3A2-204ENST00000589118 ZNF705GA8MUZ8 300 aaPredicted RBP10.56□□□□□ -0.72
SF3A2-204ENST00000589118 NDUFB6O95139 128 aa10.56□□□□□ -0.72
SF3A2-204ENST00000589118 DEFB130BP0DP73 79 aa10.56□□□□□ -0.72
SF3A2-204ENST00000589118 DEFB130AP0DP74 79 aa10.56□□□□□ -0.72
SF3A2-204ENST00000589118 SLC25A6P12236 298 aa10.56□□□□□ -0.72
SF3A2-204ENST00000589118 HTR2BP41595 481 aa10.56□□□□□ -0.72
SF3A2-204ENST00000589118 YPEL3P61236 119 aaPredicted RBP10.56□□□□□ -0.72
SF3A2-204ENST00000589118 SMCO1Q147U7 214 aa10.56□□□□□ -0.72
SF3A2-204ENST00000589118 FAM78BQ5VT40 261 aa10.56□□□□□ -0.72
SF3A2-204ENST00000589118 LYZL2Q7Z4W2 148 aa10.56□□□□□ -0.72
SF3A2-204ENST00000589118 TMED4Q7Z7H5 227 aa10.56□□□□□ -0.72
SF3A2-204ENST00000589118 ACY3Q96HD9 319 aa10.56□□□□□ -0.72
SF3A2-204ENST00000589118 PRR13Q9NZ81 148 aa10.56□□□□□ -0.72
SF3A2-204ENST00000589118 DMBT1Q9UGM3 2413 aaPredicted RBP10.55□□□□□ -0.72
SF3A2-204ENST00000589118 SFT2D2O95562 160 aa10.55□□□□□ -0.72
SF3A2-204ENST00000589118 INAFM2P0DMQ5 153 aa10.55□□□□□ -0.72
SF3A2-204ENST00000589118 BTCP35070 178 aa10.55□□□□□ -0.72
SF3A2-204ENST00000589118 DEFA1P59665 94 aa10.55□□□□□ -0.72
SF3A2-204ENST00000589118 DEFA3P59666 94 aa10.55□□□□□ -0.72
SF3A2-204ENST00000589118 RRN3P1Q2M238 152 aa10.55□□□□□ -0.72
SF3A2-204ENST00000589118 MZT2BQ6NZ67 158 aa10.55□□□□□ -0.72
SF3A2-204ENST00000589118 GOLT1BQ9Y3E0 138 aa10.55□□□□□ -0.72
SF3A2-204ENST00000589118 TEX48A0A1B0GUV7 120 aa10.54□□□□□ -0.72
SF3A2-204ENST00000589118 EPM2AB3EWF7 344 aa10.54□□□□□ -0.72
SF3A2-204ENST00000589118 F5H768 121 aa10.54□□□□□ -0.72
SF3A2-204ENST00000589118 LYRM1O43325 122 aa10.54□□□□□ -0.72
SF3A2-204ENST00000589118 PITX3O75364 302 aa10.54□□□□□ -0.72
SF3A2-204ENST00000589118 RD3LP0DJH9 198 aa10.54□□□□□ -0.72
SF3A2-204ENST00000589118 PSG1P11464 419 aa10.54□□□□□ -0.72
SF3A2-204ENST00000589118 PSG9Q00887 426 aa10.54□□□□□ -0.72
SF3A2-204ENST00000589118 PPP1R1AQ13522 171 aa10.54□□□□□ -0.72
SF3A2-204ENST00000589118 FOXI2Q6ZQN5 318 aa10.54□□□□□ -0.72
SF3A2-204ENST00000589118 C15orf53Q8NAA6 179 aa10.54□□□□□ -0.72
SF3A2-204ENST00000589118 RNASEH2CQ8TDP1 164 aaKnown RBP10.54□□□□□ -0.72
SF3A2-204ENST00000589118 C20orf173Q96LM9 149 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms