RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 VAMP2P63027 116 aa12.18□□□□□ -0.46
SREBF1-219ENST00000580540 EWSR1Q01844 656 aaKnown RBP eCLIP12.18□□□□□ -0.46
SREBF1-219ENST00000580540 TMEM182Q6ZP80 229 aaPredicted RBP12.18□□□□□ -0.46
SREBF1-219ENST00000580540 TMEM144Q7Z5S9 345 aa12.18□□□□□ -0.46
SREBF1-219ENST00000580540 TRPT1Q86TN4 253 aaKnown RBP12.18□□□□□ -0.46
SREBF1-219ENST00000580540 OR10P1Q8NGE3 313 aa12.18□□□□□ -0.46
SREBF1-219ENST00000580540 OR1B1Q8NGR6 318 aa12.18□□□□□ -0.46
SREBF1-219ENST00000580540 WDR12Q9GZL7 423 aaKnown RBP12.18□□□□□ -0.46
SREBF1-219ENST00000580540 SLC25A22Q9H936 323 aa12.18□□□□□ -0.46
SREBF1-219ENST00000580540 TENM2Q9NT68 2774 aa12.18□□□□□ -0.46
SREBF1-219ENST00000580540 CSMD3Q7Z407 3707 aa12.18□□□□□ -0.46
SREBF1-219ENST00000580540 PMS2P5A8MQ11 134 aa12.17□□□□□ -0.46
SREBF1-219ENST00000580540 IL5P05113 134 aa12.17□□□□□ -0.46
SREBF1-219ENST00000580540 ASAH1Q13510 395 aa12.17□□□□□ -0.46
SREBF1-219ENST00000580540 C1orf194Q5T5A4 169 aa12.17□□□□□ -0.46
SREBF1-219ENST00000580540 TMEM14EPQ6UXP3 125 aa12.17□□□□□ -0.46
SREBF1-219ENST00000580540 CYP2G1PQ6ZSU1 146 aa12.17□□□□□ -0.46
SREBF1-219ENST00000580540 TMEM217Q8N7C4 229 aa12.17□□□□□ -0.46
SREBF1-219ENST00000580540 ENKURQ8TC29 256 aa12.17□□□□□ -0.46
SREBF1-219ENST00000580540 TMEM147Q9BVK8 224 aa12.17□□□□□ -0.46
SREBF1-219ENST00000580540 PTTG2Q9NZH5 202 aa12.17□□□□□ -0.46
SREBF1-219ENST00000580540 DOK5Q9P104 306 aa12.17□□□□□ -0.46
SREBF1-219ENST00000580540 MGAT4CQ9UBM8 478 aa12.17□□□□□ -0.46
SREBF1-219ENST00000580540 C7orf66A4D0T2 115 aa12.16□□□□□ -0.46
SREBF1-219ENST00000580540 TSC22D2O75157 780 aa12.16□□□□□ -0.46
SREBF1-219ENST00000580540 SPP1P10451 314 aa12.16□□□□□ -0.46
SREBF1-219ENST00000580540 ID1P41134 155 aa12.16□□□□□ -0.46
SREBF1-219ENST00000580540 BCAP31P51572 246 aa12.16□□□□□ -0.46
SREBF1-219ENST00000580540 TAS2R30P59541 319 aa12.16□□□□□ -0.46
SREBF1-219ENST00000580540 DLK1P80370 383 aa12.16□□□□□ -0.46
SREBF1-219ENST00000580540 MORN3Q6PF18 240 aaPredicted RBP12.16□□□□□ -0.46
SREBF1-219ENST00000580540 SACSQ9NZJ4 4579 aa12.16□□□□□ -0.46
SREBF1-219ENST00000580540 LCE6AA0A183 80 aa12.15□□□□□ -0.46
SREBF1-219ENST00000580540 ZNF98A6NK75 572 aa12.15□□□□□ -0.46
SREBF1-219ENST00000580540 DEFB4AO15263 64 aa12.15□□□□□ -0.46
SREBF1-219ENST00000580540 UPK1BO75841 260 aa12.15□□□□□ -0.46
SREBF1-219ENST00000580540 C2orf50Q96LR7 162 aa12.15□□□□□ -0.46
SREBF1-219ENST00000580540 NPVFQ9HCQ7 196 aa12.15□□□□□ -0.46
SREBF1-219ENST00000580540 SEPSECSQ9HD40 501 aaKnown RBP12.15□□□□□ -0.46
SREBF1-219ENST00000580540 CLEC5AQ9NY25 188 aa12.15□□□□□ -0.46
SREBF1-219ENST00000580540 K7EPK0 472 aa12.14□□□□□ -0.47
SREBF1-219ENST00000580540 OR5G3P0C626 314 aa12.14□□□□□ -0.47
SREBF1-219ENST00000580540 C4BPBP20851 252 aa12.14□□□□□ -0.47
SREBF1-219ENST00000580540 S100A7P31151 101 aa12.14□□□□□ -0.47
SREBF1-219ENST00000580540 GALR1P47211 349 aa12.14□□□□□ -0.47
SREBF1-219ENST00000580540 CAV2P51636 162 aa12.14□□□□□ -0.47
SREBF1-219ENST00000580540 DEFB1P60022 68 aa12.14□□□□□ -0.47
SREBF1-219ENST00000580540 S100A10P60903 97 aa12.14□□□□□ -0.47
SREBF1-219ENST00000580540 ARL16Q0P5N6 197 aa12.14□□□□□ -0.47
SREBF1-219ENST00000580540 RSG1Q9BU20 258 aa12.14□□□□□ -0.47
SREBF1-219ENST00000580540 SLC25A32Q9H2D1 315 aa12.14□□□□□ -0.47
SREBF1-219ENST00000580540 HYPMO75409 117 aa12.13□□□□□ -0.47
SREBF1-219ENST00000580540 IGKV3-20P01619 116 aa12.13□□□□□ -0.47
SREBF1-219ENST00000580540 GIG44P09565 113 aaPredicted RBP12.13□□□□□ -0.47
SREBF1-219ENST00000580540 LINC00869P0C866 280 aa12.13□□□□□ -0.47
SREBF1-219ENST00000580540 RAP2BP61225 183 aa12.13□□□□□ -0.47
SREBF1-219ENST00000580540 SLC38A11Q08AI6 406 aa12.13□□□□□ -0.47
SREBF1-219ENST00000580540 TMEM41BQ5BJD5 291 aa12.13□□□□□ -0.47
SREBF1-219ENST00000580540 C16orf92Q96LL3 132 aa12.13□□□□□ -0.47
SREBF1-219ENST00000580540 SCRT1Q9BWW7 348 aa12.13□□□□□ -0.47
SREBF1-219ENST00000580540 SLC45A2Q9UMX9 530 aa12.13□□□□□ -0.47
SREBF1-219ENST00000580540 HIGD1AQ9Y241 93 aa12.13□□□□□ -0.47
SREBF1-219ENST00000580540 FAM24AA6NFZ4 105 aa12.12□□□□□ -0.47
SREBF1-219ENST00000580540 H3BMM0 161 aa12.12□□□□□ -0.47
SREBF1-219ENST00000580540 JTBO76095 146 aa12.12□□□□□ -0.47
SREBF1-219ENST00000580540 PVALBP20472 110 aaPredicted RBP12.12□□□□□ -0.47
SREBF1-219ENST00000580540 PSMB3P49720 205 aa12.12□□□□□ -0.47
SREBF1-219ENST00000580540 SELENOTP62341 195 aa12.12□□□□□ -0.47
SREBF1-219ENST00000580540 IFITM3Q01628 133 aa12.12□□□□□ -0.47
SREBF1-219ENST00000580540 FGL1Q08830 312 aa12.12□□□□□ -0.47
SREBF1-219ENST00000580540 TEPPQ6URK8 271 aa12.12□□□□□ -0.47
SREBF1-219ENST00000580540 GPN1Q9HCN4 374 aaPredicted RBP12.12□□□□□ -0.47
SREBF1-219ENST00000580540 XCL2Q9UBD3 114 aa12.12□□□□□ -0.47
SREBF1-219ENST00000580540 RYR2Q92736 4967 aa12.11□□□□□ -0.47
SREBF1-219ENST00000580540 FNDC10F2Z333 226 aa12.11□□□□□ -0.47
SREBF1-219ENST00000580540 GOSR2O14653 212 aa12.11□□□□□ -0.47
SREBF1-219ENST00000580540 DEDDO75618 318 aa12.11□□□□□ -0.47
SREBF1-219ENST00000580540 CST7O76096 145 aa12.11□□□□□ -0.47
SREBF1-219ENST00000580540 NUTF2P61970 127 aaKnown RBP12.11□□□□□ -0.47
SREBF1-219ENST00000580540 GDF5OSQ5U4N7 250 aa12.11□□□□□ -0.47
SREBF1-219ENST00000580540 SLC25A39Q9BZJ4 359 aaPredicted RBP12.11□□□□□ -0.47
SREBF1-219ENST00000580540 ARL6Q9H0F7 186 aa12.11□□□□□ -0.47
SREBF1-219ENST00000580540 NUPR2A6NF83 97 aa12.1□□□□□ -0.47
SREBF1-219ENST00000580540 ISLRO14498 428 aa12.1□□□□□ -0.47
SREBF1-219ENST00000580540 SOCS3O14543 225 aa12.1□□□□□ -0.47
SREBF1-219ENST00000580540 HLA-DRB4P13762 266 aa12.1□□□□□ -0.47
SREBF1-219ENST00000580540 ATF4P18848 351 aaPredicted RBP12.1□□□□□ -0.47
SREBF1-219ENST00000580540 MEOX2P50222 304 aa12.1□□□□□ -0.47
SREBF1-219ENST00000580540 FXYD7P58549 80 aa12.1□□□□□ -0.47
SREBF1-219ENST00000580540 NANOS2P60321 138 aaKnown RBP12.1□□□□□ -0.47
SREBF1-219ENST00000580540 RAB32Q13637 225 aa12.1□□□□□ -0.47
SREBF1-219ENST00000580540 NRARPQ7Z6K4 114 aa12.1□□□□□ -0.47
SREBF1-219ENST00000580540 OR4B1Q8NGF8 309 aa12.1□□□□□ -0.47
SREBF1-219ENST00000580540 C11orf45Q8TAV5 145 aa12.1□□□□□ -0.47
SREBF1-219ENST00000580540 GPR82Q96P67 336 aa12.1□□□□□ -0.47
SREBF1-219ENST00000580540 UHRF2Q96PU4 802 aa12.1□□□□□ -0.47
SREBF1-219ENST00000580540 SHANK2-AS3Q9BTD1 123 aa12.1□□□□□ -0.47
SREBF1-219ENST00000580540 GGACTQ9BVM4 153 aa12.1□□□□□ -0.47
SREBF1-219ENST00000580540 BATF3Q9NR55 127 aa12.1□□□□□ -0.47
SREBF1-219ENST00000580540 HLA-DRB4X5D2U9 266 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms