RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 CYP2G1PQ6ZSU1 146 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 CEND1Q8N111 149 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 RTL8AQ9BWD3 113 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 KLK13Q9UKR3 277 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 PRUNE2Q8WUY3 3088 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 PLXNB3Q9ULL4 1909 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 A0A0D9SEW6 157 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 PLAC8L1A1L4L8 177 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 C5orf49A4QMS7 147 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 KNCNA6PVL3 124 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 COX7CP15954 63 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 SS18Q15532 418 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 SLC25A30Q5SVS4 291 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 MRPL2Q5T653 305 aaKnown RBP5.72□□□□□ -1.49
NIPBL-208ENST00000514335 C22orf39Q6P5X5 142 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 PCDH15Q96QU1 1955 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 RNF223E7ERA6 249 aa5.71□□□□□ -1.49
NIPBL-208ENST00000514335 HLA-DQA1Q5Y7H0 255 aa5.71□□□□□ -1.49
NIPBL-208ENST00000514335 POM121L12Q8N7R1 296 aa5.71□□□□□ -1.49
NIPBL-208ENST00000514335 OR9G1Q8NH87 305 aa5.71□□□□□ -1.49
NIPBL-208ENST00000514335 ODF3Q96PU9 254 aa5.71□□□□□ -1.49
NIPBL-208ENST00000514335 GPHA2Q96T91 129 aa5.71□□□□□ -1.49
NIPBL-208ENST00000514335 S1PR3Q99500 378 aa5.71□□□□□ -1.49
NIPBL-208ENST00000514335 SMIM7Q9BQ49 75 aa5.71□□□□□ -1.49
NIPBL-208ENST00000514335 AICDAQ9GZX7 198 aa5.71□□□□□ -1.49
NIPBL-208ENST00000514335 ARID1AO14497 2285 aa5.71□□□□□ -1.5
NIPBL-208ENST00000514335 TRGV11A0A075B6L2 103 aa5.71□□□□□ -1.5
NIPBL-208ENST00000514335 C2CD4DB7Z1M9 353 aa5.71□□□□□ -1.5
NIPBL-208ENST00000514335 SRSF10O75494 262 aaKnown RBP5.71□□□□□ -1.5
NIPBL-208ENST00000514335 PSMB8P28062 276 aa5.71□□□□□ -1.5
NIPBL-208ENST00000514335 LIM2P55344 173 aa5.71□□□□□ -1.5
NIPBL-208ENST00000514335 TMEM187Q14656 261 aa5.71□□□□□ -1.5
NIPBL-208ENST00000514335 LINC01356Q8N9X3 169 aa5.71□□□□□ -1.5
NIPBL-208ENST00000514335 PLEKHA3Q9HB20 300 aa5.71□□□□□ -1.5
NIPBL-208ENST00000514335 PTPRBP23467 1997 aa5.71□□□□□ -1.5
NIPBL-208ENST00000514335 A0A1W2PNR3 127 aa5.71□□□□□ -1.5
NIPBL-208ENST00000514335 IGLL5B9A064 214 aa5.71□□□□□ -1.5
NIPBL-208ENST00000514335 OR5AL1P0C617 328 aa5.71□□□□□ -1.5
NIPBL-208ENST00000514335 LOXL1Q08397 574 aaPredicted RBP5.71□□□□□ -1.5
NIPBL-208ENST00000514335 ZNF791Q3KP31 576 aaPredicted RBP5.71□□□□□ -1.5
NIPBL-208ENST00000514335 ASPHD1Q5U4P2 390 aa5.71□□□□□ -1.5
NIPBL-208ENST00000514335 ATP5L2Q7Z4Y8 100 aa5.71□□□□□ -1.5
NIPBL-208ENST00000514335 FAM57AQ8TBR7 257 aa5.71□□□□□ -1.5
NIPBL-208ENST00000514335 DPH3P1Q9H4G8 78 aa5.71□□□□□ -1.5
NIPBL-208ENST00000514335 TIMM13Q9Y5L4 95 aaPredicted RBP5.71□□□□□ -1.5
NIPBL-208ENST00000514335 FOXS1O43638 330 aa5.7□□□□□ -1.5
NIPBL-208ENST00000514335 PYYP10082 97 aa5.7□□□□□ -1.5
NIPBL-208ENST00000514335 MYCNOSP40205 109 aa5.7□□□□□ -1.5
NIPBL-208ENST00000514335 SFTPA2Q8IWL1 248 aa5.7□□□□□ -1.5
NIPBL-208ENST00000514335 SFTPA1Q8IWL2 248 aa5.7□□□□□ -1.5
NIPBL-208ENST00000514335 RNF182Q8N6D2 247 aa5.7□□□□□ -1.5
NIPBL-208ENST00000514335 DCANP1Q8TF63 244 aa5.7□□□□□ -1.5
NIPBL-208ENST00000514335 TMEM70Q9BUB7 260 aa5.7□□□□□ -1.5
NIPBL-208ENST00000514335 GNG13Q9P2W3 67 aa5.7□□□□□ -1.5
NIPBL-208ENST00000514335 GOLGA4Q13439 2230 aaKnown RBP5.7□□□□□ -1.5
NIPBL-208ENST00000514335 TRAV8-2A0A0B4J237 113 aa5.7□□□□□ -1.5
NIPBL-208ENST00000514335 SMKR1H3BMG3 65 aa5.7□□□□□ -1.5
NIPBL-208ENST00000514335 BMPR1BO00238 502 aa5.7□□□□□ -1.5
NIPBL-208ENST00000514335 SCRG1O75711 98 aa5.7□□□□□ -1.5
NIPBL-208ENST00000514335 FXYD5Q96DB9 178 aa5.7□□□□□ -1.5
NIPBL-208ENST00000514335 AP5S1Q9NUS5 200 aa5.7□□□□□ -1.5
NIPBL-208ENST00000514335 LINC00527Q9UJ94 153 aa5.7□□□□□ -1.5
NIPBL-208ENST00000514335 PLXNB1O43157 2135 aa5.69□□□□□ -1.5
NIPBL-208ENST00000514335 ZFP92A6NM28 416 aa5.69□□□□□ -1.5
NIPBL-208ENST00000514335 COX6A1P12074 109 aa5.69□□□□□ -1.5
NIPBL-208ENST00000514335 ZNF20P17024 532 aa5.69□□□□□ -1.5
NIPBL-208ENST00000514335 DPTQ07507 201 aa5.69□□□□□ -1.5
NIPBL-208ENST00000514335 RUSC1-AS1Q66K80 236 aa5.69□□□□□ -1.5
NIPBL-208ENST00000514335 FP248Q71RG6 208 aaPredicted RBP5.69□□□□□ -1.5
NIPBL-208ENST00000514335 IL1F10Q8WWZ1 152 aa5.69□□□□□ -1.5
NIPBL-208ENST00000514335 PRRC2BQ5JSZ5 2229 aaKnown RBP5.69□□□□□ -1.5
NIPBL-208ENST00000514335 ARHGEF17Q96PE2 2063 aaPredicted RBP5.69□□□□□ -1.5
NIPBL-208ENST00000514335 F6UB75 175 aa5.69□□□□□ -1.5
NIPBL-208ENST00000514335 IGHG1P01857 330 aa5.69□□□□□ -1.5
NIPBL-208ENST00000514335 CSRP3P50461 194 aa5.69□□□□□ -1.5
NIPBL-208ENST00000514335 FXYD2P54710 66 aa5.69□□□□□ -1.5
NIPBL-208ENST00000514335 LCN10Q6JVE6 187 aa5.69□□□□□ -1.5
NIPBL-208ENST00000514335 ZNF322Q6U7Q0 402 aaPredicted RBP5.69□□□□□ -1.5
NIPBL-208ENST00000514335 C11orf68Q9H3H3 251 aaKnown RBP5.69□□□□□ -1.5
NIPBL-208ENST00000514335 ZNF256Q9Y2P7 627 aaPredicted RBP5.69□□□□□ -1.5
NIPBL-208ENST00000514335 SPTBN4Q9H254 2564 aa5.69□□□□□ -1.5
NIPBL-208ENST00000514335 DOCK11Q5JSL3 2073 aa5.69□□□□□ -1.5
NIPBL-208ENST00000514335 EPM2AB3EWF7 344 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 INS-IGF2F8WCM5 200 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 P0DMU3 169 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 FAM231AP0DMU4 169 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 FAM231CP0DMU5 169 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 MPV17P39210 176 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 KCTD18Q6PI47 426 aaPredicted RBP5.68□□□□□ -1.5
NIPBL-208ENST00000514335 DRAM1Q8N682 238 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 TMSB15BA0A087X1C1 80 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 C16orf97H3BN30 126 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 NCR2O95944 276 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 EGR2P11161 476 aaPredicted RBP5.68□□□□□ -1.5
NIPBL-208ENST00000514335 SUB1P53999 127 aaKnown RBP eCLIP5.68□□□□□ -1.5
NIPBL-208ENST00000514335 C12orf73Q69YU5 71 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 PRR15Q8IV56 129 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 OR2A5Q96R48 311 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 OCIAD1Q9NX40 245 aa5.68□□□□□ -1.5
NIPBL-208ENST00000514335 ATRXP46100 2492 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms