RNA–Protein interactions for RNA: ENST00000390534.1

TRAJ3-201, Transcript of T cell receptor alpha joining 3, humanhuman

APPRIS P1 BASIC

Gene TRAJ3, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ3-201ENST00000390534 C1QCP02747 245 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 HIST1H2BJP06899 126 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 CTSDP07339 412 aaPredicted RBP0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 PAEPP09466 180 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 COX6A1P12074 109 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 PEBP1P30086 187 aaKnown RBP0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 RPL22P35268 128 aaKnown RBP0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 FOXA3P55318 350 aaPredicted RBP0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 KRTAP10-3P60369 221 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 TMEM258P61165 79 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 ERHP84090 104 aaKnown RBP0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 ZNF90Q03938 601 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 ZNF345Q14585 488 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 IGFBP7Q16270 282 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 NNATQ16517 81 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 VMA21Q3ZAQ7 101 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 RNASE10Q5GAN6 216 aaKnown RBP0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 LCE3EQ5T5B0 92 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 Q5XG85 94 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 IGFL1Q6UW32 110 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 PATE2Q6UY27 113 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 C4orf22Q6V702 233 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 PHF5AQ7RTV0 110 aaKnown RBP0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 AAED1Q7RTV5 226 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 TCTE3Q8IZS6 198 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 OR8I2Q8N0Y5 310 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 C10orf126Q8N4M7 172 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 SLC30A7Q8NEW0 376 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 TSTD1Q8NFU3 115 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 OR8B3Q8NGG8 313 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 OR51A4Q8NGJ6 313 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 CMTM2Q8TAZ6 248 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 BRK1Q8WUW1 75 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 CHCHD1Q96BP2 118 aaKnown RBP0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 C20orf166-AS1Q96NR2 134 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 VPS25Q9BRG1 176 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 Q9BRP9 147 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 SMIM3Q9BZL3 60 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 TPT1P8Q9HAU6 139 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 TAF9BQ9HBM6 251 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 NIT2Q9NQR4 276 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 NDUFB11Q9NX14 153 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 PAIP2BQ9ULR5 123 aaKnown RBP0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 HS3ST2Q9Y278 367 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 COL16A1Q07092 1604 aaPredicted RBP0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 TANC2Q9HCD6 1990 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 OBSL1O75147 1896 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 MYO5AQ9Y4I1 1855 aaKnown RBP0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 TOPBP1Q92547 1522 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 MED12LQ86YW9 2145 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 DENND4CQ5VZ89 1909 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 FREM1Q5H8C1 2179 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 BAZ2BQ9UIF8 2168 aaKnown RBP0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 MED1Q15648 1581 aaPredicted RBP0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 XIRP1Q702N8 1843 aaKnown RBP0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 SLX4Q8IY92 1834 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 ARAP1Q96P48 1450 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 CEP164Q9UPV0 1460 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 NUP210Q8TEM1 1887 aaPredicted RBP0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 TRAV1-1A0A0B4J248 108 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 A0A0G2JQZ4 141 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 A0A1B0GV90 55 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 CCDC160A6NGH7 325 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 ZNF705FA8MVS1 300 aaPredicted RBP0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 A8MWV9 139 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 LINC00587B1AMM8 73 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 B4DSR2 109 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 C5orf58C9J3I9 102 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 E7EQL1 145 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 K7EP13 123 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 SDCBPO00560 298 aaPredicted RBP0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 DPM2O94777 84 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 MT-ND6P03923 174 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 SLC25A5P05141 298 aaKnown RBP0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 SCTP09683 121 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 METTL15P1P0C7V9 234 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 P0DMU3 169 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 FAM231AP0DMU4 169 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 FAM231CP0DMU5 169 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 LINC00694P0DN24 101 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 RNASE2P10153 161 aaKnown RBP0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 MGST1P10620 155 aaKnown RBP0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 EVI2AP22794 236 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 CRYGSP22914 178 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 KDELR1P24390 212 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 FUSP35637 526 aaKnown RBP eCLIP0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 RPL35P42766 123 aaKnown RBP0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 RAB5CP51148 216 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 DNAJB13P59910 316 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 KRTAP12-2P59991 146 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 KRTAP10-5P60370 271 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 KRTAP10-6P60371 365 aaPredicted RBP0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 RPL26P61254 145 aaKnown RBP0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 MYL5Q02045 173 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 CDK5R1Q15078 307 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 SS18Q15532 418 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 NDUFA5Q16718 116 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 ESRGQ1W209 222 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 TMEM155Q4W5P6 130 aa0.61□□□□□ -2.31
TRAJ3-201ENST00000390534 MORN2Q502X0 79 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 332.8 ms