RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 LAMA3Q16787 3333 aa5.76□□□□□ -1.49
NIPBL-208ENST00000514335 SHISA9B4DS77 424 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 E9PLD3 99 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 C11orf98E9PRG8 122 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 K7ESM1 405 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 FCN1O00602 326 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 ASIPP42127 132 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 SNRPGP62308 76 aaKnown RBP5.75□□□□□ -1.49
NIPBL-208ENST00000514335 ZNF726P1Q15940 193 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 FBXL14Q8N1E6 418 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 RBMXL1Q96E39 390 aaKnown RBP5.75□□□□□ -1.49
NIPBL-208ENST00000514335 OR8B2Q96RD0 313 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 Q9H8V8 135 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 SAP30LQ9HAJ7 183 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 CMC2Q9NRP2 79 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 ABRACLQ9P1F3 81 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 hADV29S1A0JD25 119 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 LINC01548A6NM66 108 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 C8orf87E5RJ46 101 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 PPP1R11O60927 126 aaPredicted RBP5.75□□□□□ -1.49
NIPBL-208ENST00000514335 TCL1BO95988 128 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 GYPAP02724 150 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 RRN3P1Q2M238 152 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 RSPO1Q2MKA7 263 aaPredicted RBP5.75□□□□□ -1.49
NIPBL-208ENST00000514335 CFAP126Q5VTH2 177 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 TEPPQ6URK8 271 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 MMD2Q8IY49 270 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 FTSJ1Q9UET6 329 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 CACNG5Q9UF02 275 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 RABAC1Q9UI14 185 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 BRCA2P51587 3418 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 BUB3O43684 328 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 WISP1O95388 367 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 ERVK-16P61578 105 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 ZNF324BQ6AW86 544 aaPredicted RBP5.75□□□□□ -1.49
NIPBL-208ENST00000514335 Q6ZS92 163 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 LY6G5BQ8NDX9 201 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 GPX7Q96SL4 187 aaPredicted RBP5.75□□□□□ -1.49
NIPBL-208ENST00000514335 OR2W1Q9Y3N9 320 aa5.75□□□□□ -1.49
NIPBL-208ENST00000514335 LAMA2P24043 3122 aaKnown RBP5.74□□□□□ -1.49
NIPBL-208ENST00000514335 TRAV8-1A0A0A6YYK1 113 aa5.74□□□□□ -1.49
NIPBL-208ENST00000514335 A8MWV9 139 aa5.74□□□□□ -1.49
NIPBL-208ENST00000514335 NDUFB2O95178 105 aa5.74□□□□□ -1.49
NIPBL-208ENST00000514335 EPPINO95925 133 aa5.74□□□□□ -1.49
NIPBL-208ENST00000514335 COX8AP10176 69 aa5.74□□□□□ -1.49
NIPBL-208ENST00000514335 C11orf53Q8IXP5 236 aa5.74□□□□□ -1.49
NIPBL-208ENST00000514335 SHANK2-AS3Q9BTD1 123 aa5.74□□□□□ -1.49
NIPBL-208ENST00000514335 CENPFP49454 3210 aa5.74□□□□□ -1.49
NIPBL-208ENST00000514335 C3orf85A0A1B0GTC6 90 aa5.74□□□□□ -1.49
NIPBL-208ENST00000514335 FAM181BA6NEQ2 426 aa5.74□□□□□ -1.49
NIPBL-208ENST00000514335 K7ERJ3 54 aa5.74□□□□□ -1.49
NIPBL-208ENST00000514335 INAFM2P0DMQ5 153 aa5.74□□□□□ -1.49
NIPBL-208ENST00000514335 FCGR2CP31995 323 aa5.74□□□□□ -1.49
NIPBL-208ENST00000514335 CCL23P55773 120 aa5.74□□□□□ -1.49
NIPBL-208ENST00000514335 CYCSP99999 105 aaKnown RBP5.74□□□□□ -1.49
NIPBL-208ENST00000514335 SP5Q6BEB4 398 aaPredicted RBP5.74□□□□□ -1.49
NIPBL-208ENST00000514335 NOXRED1Q6NXP6 359 aa5.74□□□□□ -1.49
NIPBL-208ENST00000514335 TMEM207Q6UWW9 146 aa5.74□□□□□ -1.49
NIPBL-208ENST00000514335 C15orf53Q8NAA6 179 aa5.74□□□□□ -1.49
NIPBL-208ENST00000514335 MRPL18Q9H0U6 180 aaKnown RBP5.74□□□□□ -1.49
NIPBL-208ENST00000514335 NYNRINQ9P2P1 1898 aaKnown RBP5.74□□□□□ -1.49
NIPBL-208ENST00000514335 C2orf16Q68DN1 1984 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 TMEM131Q92545 1883 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 C2orf70A6NJV1 201 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 H3BP45 60 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 ANGPTL7O43827 346 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 SLC25A14O95258 325 aaPredicted RBP5.73□□□□□ -1.49
NIPBL-208ENST00000514335 DSCR4P56555 118 aaPredicted RBP5.73□□□□□ -1.49
NIPBL-208ENST00000514335 RPL23P62829 140 aaKnown RBP5.73□□□□□ -1.49
NIPBL-208ENST00000514335 FAM78AQ5JUQ0 283 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 EEF1DP3Q658K8 133 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 UNQ9165/PRO28630Q6UXU0 137 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 C20orf204Q6ZNR8 217 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 Q6ZRU5 148 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 TEN1Q86WV5 123 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 TSKUQ8WUA8 353 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 APOOQ9BUR5 198 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 VCANP13611 3396 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 IGKV6-21A0A0C4DH24 114 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 MDFIC2A0A1B0GVS7 189 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 K7EM74 188 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 HLA-DRB4P13762 266 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 ARL16Q0P5N6 197 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 PAPPA-AS1Q5QFB9 102 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 PQLC2Q6ZP29 291 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 LINC01555Q8NAE3 123 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 NEXN-AS1Q8NBZ9 246 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 PHLDA1Q8WV24 401 aaPredicted RBP5.73□□□□□ -1.49
NIPBL-208ENST00000514335 FOXB1Q99853 325 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 LINC00597Q9H2U6 94 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 ZFAND3Q9H8U3 227 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 HIGD1BQ9P298 99 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 HLA-DRB4X5D2U9 266 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 DSPPQ9NZW4 1301 aa5.73□□□□□ -1.49
NIPBL-208ENST00000514335 CPSF4O95639 269 aaKnown RBP5.72□□□□□ -1.49
NIPBL-208ENST00000514335 SPEM2Q0P670 501 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 ARFRP1Q13795 201 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 EBI3Q14213 229 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 RTL8BQ17RB0 113 aa5.72□□□□□ -1.49
NIPBL-208ENST00000514335 CEMP1Q6PRD7 247 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms