RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 MT-ND6P03923 174 aa15.27■□□□□ 0.04
SNX17-202ENST00000427123 PSG1P11464 419 aa15.27■□□□□ 0.04
SNX17-202ENST00000427123 CCDC144NLQ6NUI1 221 aa15.27■□□□□ 0.04
SNX17-202ENST00000427123 SERTAD4Q9NUC0 356 aa15.27■□□□□ 0.04
SNX17-202ENST00000427123 ZNF705GA8MUZ8 300 aaPredicted RBP15.27■□□□□ 0.03
SNX17-202ENST00000427123 GZMBP10144 247 aa15.27■□□□□ 0.03
SNX17-202ENST00000427123 LYZP61626 148 aa15.27■□□□□ 0.03
SNX17-202ENST00000427123 GNG5P63218 68 aa15.27■□□□□ 0.03
SNX17-202ENST00000427123 SMIM12Q96EX1 92 aa15.27■□□□□ 0.03
SNX17-202ENST00000427123 TPRP12270 2363 aaKnown RBP15.26■□□□□ 0.03
SNX17-202ENST00000427123 TRAV34A0A0B4J273 112 aa15.26■□□□□ 0.03
SNX17-202ENST00000427123 A0A1W2PPR1 153 aa15.26■□□□□ 0.03
SNX17-202ENST00000427123 OOSP1A8MZH6 123 aa15.26■□□□□ 0.03
SNX17-202ENST00000427123 K7EIM0 57 aa15.26■□□□□ 0.03
SNX17-202ENST00000427123 UBE2G1P62253 170 aa15.26■□□□□ 0.03
SNX17-202ENST00000427123 C5orf64Q2M2E5 130 aa15.26■□□□□ 0.03
SNX17-202ENST00000427123 VMO1Q7Z5L0 202 aa15.26■□□□□ 0.03
SNX17-202ENST00000427123 PGPA6NDG6 321 aa15.26■□□□□ 0.03
SNX17-202ENST00000427123 SNRPCP09234 159 aaKnown RBP15.26■□□□□ 0.03
SNX17-202ENST00000427123 HES1Q14469 280 aa15.26■□□□□ 0.03
SNX17-202ENST00000427123 C5orf17Q8NAS9 161 aa15.26■□□□□ 0.03
SNX17-202ENST00000427123 TMEM14CQ9P0S9 112 aa15.26■□□□□ 0.03
SNX17-202ENST00000427123 KLF12Q9Y4X4 402 aa15.26■□□□□ 0.03
SNX17-202ENST00000427123 A6NNC1 897 aa15.25■□□□□ 0.03
SNX17-202ENST00000427123 RD3LP0DJH9 198 aa15.25■□□□□ 0.03
SNX17-202ENST00000427123 CRISP2P16562 243 aa15.25■□□□□ 0.03
SNX17-202ENST00000427123 CDKN1AP38936 164 aa15.25■□□□□ 0.03
SNX17-202ENST00000427123 TCL1AP56279 114 aa15.25■□□□□ 0.03
SNX17-202ENST00000427123 MINOS1Q5TGZ0 78 aa15.25■□□□□ 0.03
SNX17-202ENST00000427123 TMEM256Q8N2U0 113 aa15.25■□□□□ 0.03
SNX17-202ENST00000427123 ATG101Q9BSB4 218 aa15.25■□□□□ 0.03
SNX17-202ENST00000427123 MINOS1-NBL1R4GNA1 71 aa15.25■□□□□ 0.03
SNX17-202ENST00000427123 A0A1B0GUS0 222 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 A0A1W2PRD5 423 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 A0A1W2PRF3 423 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 A0A1W2PRM7 423 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 GRIFINA4D1Z8 144 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 IGKV1-17P01599 117 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 AMY1AP04745 511 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 CHRDL1Q9BU40 450 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 SLC25A39Q9BZJ4 359 aaPredicted RBP15.24■□□□□ 0.03
SNX17-202ENST00000427123 IZUMO1RA6ND01 250 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 GATCO43716 136 aaKnown RBP15.24■□□□□ 0.03
SNX17-202ENST00000427123 FRMD6-AS1P0C7T7 363 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 HOXB4P17483 251 aaPredicted RBP15.24■□□□□ 0.03
SNX17-202ENST00000427123 CD24P25063 80 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 PKIAP61925 76 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 LEMD1Q68G75 181 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 ZNF600Q6ZNG1 722 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 TMEM136Q6ZRR5 245 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 CMTM2Q8TAZ6 248 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 MBD6Q96DN6 1003 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 Q9H3A6 140 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 UBTD1Q9HAC8 227 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 ARHGAP32A7KAX9 2087 aa15.24■□□□□ 0.03
SNX17-202ENST00000427123 IGFBPL1Q8WX77 278 aa15.23■□□□□ 0.03
SNX17-202ENST00000427123 GRAMD2BQ96HH9 432 aa15.23■□□□□ 0.03
SNX17-202ENST00000427123 FMC1Q96HJ9 113 aa15.23■□□□□ 0.03
SNX17-202ENST00000427123 RBM14Q96PK6 669 aaKnown RBP15.23■□□□□ 0.03
SNX17-202ENST00000427123 C7orf69Q9H7B7 122 aa15.23■□□□□ 0.03
SNX17-202ENST00000427123 MRPL27Q9P0M9 148 aaKnown RBP15.23■□□□□ 0.03
SNX17-202ENST00000427123 NAT8BQ9UHF3 227 aa15.23■□□□□ 0.03
SNX17-202ENST00000427123 TRAV20A0A0B4J274 112 aa15.22■□□□□ 0.03
SNX17-202ENST00000427123 NPIPB5A8MRT5 1133 aa15.22■□□□□ 0.03
SNX17-202ENST00000427123 SPINK4O60575 86 aa15.22■□□□□ 0.03
SNX17-202ENST00000427123 ZFP36P26651 326 aaKnown RBP15.22■□□□□ 0.03
SNX17-202ENST00000427123 TMEM190Q8WZ59 177 aa15.22■□□□□ 0.03
SNX17-202ENST00000427123 FAM103A1Q9BTL3 118 aaKnown RBP15.22■□□□□ 0.03
SNX17-202ENST00000427123 ATRXP46100 2492 aa15.22■□□□□ 0.03
SNX17-202ENST00000427123 TSTD3H0UI37 97 aa15.22■□□□□ 0.03
SNX17-202ENST00000427123 HLA-DQA1P01909 254 aa15.22■□□□□ 0.03
SNX17-202ENST00000427123 ESDP10768 282 aa15.22■□□□□ 0.03
SNX17-202ENST00000427123 Q0VG73 95 aa15.22■□□□□ 0.03
SNX17-202ENST00000427123 FBLN7Q53RD9 439 aa15.22■□□□□ 0.03
SNX17-202ENST00000427123 C9orf152Q5JTZ5 239 aa15.22■□□□□ 0.03
SNX17-202ENST00000427123 Q8N6K4 173 aa15.22■□□□□ 0.03
SNX17-202ENST00000427123 TMEM68Q96MH6 324 aa15.22■□□□□ 0.03
SNX17-202ENST00000427123 GPR82Q96P67 336 aa15.22■□□□□ 0.03
SNX17-202ENST00000427123 SIRPDQ9H106 197 aa15.22■□□□□ 0.03
SNX17-202ENST00000427123 OTORQ9NRC9 128 aa15.22■□□□□ 0.03
SNX17-202ENST00000427123 TP53TG3Q9ULZ0 132 aa15.22■□□□□ 0.03
SNX17-202ENST00000427123 RPH3ALQ9UNE2 315 aa15.22■□□□□ 0.03
SNX17-202ENST00000427123 TOMM40O96008 361 aa15.21■□□□□ 0.03
SNX17-202ENST00000427123 CA1P00915 261 aaPredicted RBP15.21■□□□□ 0.03
SNX17-202ENST00000427123 HIST1H1EP10412 219 aaKnown RBP15.21■□□□□ 0.03
SNX17-202ENST00000427123 ZNF562Q6V9R5 426 aa15.21■□□□□ 0.03
SNX17-202ENST00000427123 DYNAPQ8N1N2 210 aa15.21■□□□□ 0.03
SNX17-202ENST00000427123 NUDT10Q8NFP7 164 aa15.21■□□□□ 0.03
SNX17-202ENST00000427123 ITLN2Q8WWU7 325 aaPredicted RBP15.21■□□□□ 0.03
SNX17-202ENST00000427123 ARPC1AQ92747 370 aa15.21■□□□□ 0.03
SNX17-202ENST00000427123 NUDT11Q96G61 164 aa15.21■□□□□ 0.03
SNX17-202ENST00000427123 NUPR1O60356 82 aa15.21■□□□□ 0.02
SNX17-202ENST00000427123 TCRAP04437 139 aa15.21■□□□□ 0.02
SNX17-202ENST00000427123 EFNA4P52798 201 aa15.21■□□□□ 0.02
SNX17-202ENST00000427123 SLC35B1P78383 322 aa15.21■□□□□ 0.02
SNX17-202ENST00000427123 USF2Q15853 346 aaPredicted RBP15.21■□□□□ 0.02
SNX17-202ENST00000427123 MRPL54Q6P161 138 aaKnown RBP15.21■□□□□ 0.02
SNX17-202ENST00000427123 RASL11AQ6T310 242 aa15.21■□□□□ 0.02
SNX17-202ENST00000427123 UNQ6494/PRO21346Q6UXR6 183 aa15.21■□□□□ 0.02
SNX17-202ENST00000427123 FAM168AQ92567 244 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms