RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 SMCO1Q147U7 214 aa12.67□□□□□ -0.38
CSNK1D-201ENST00000269361 LYZL2Q7Z4W2 148 aa12.67□□□□□ -0.38
CSNK1D-201ENST00000269361 SEPSECSQ9HD40 501 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-201ENST00000269361 NRN1Q9NPD7 142 aa12.67□□□□□ -0.38
CSNK1D-201ENST00000269361 MCUBQ9NWR8 336 aa12.67□□□□□ -0.38
CSNK1D-201ENST00000269361 HSPB7Q9UBY9 170 aa12.67□□□□□ -0.38
CSNK1D-201ENST00000269361 SHPKQ9UHJ6 478 aa12.67□□□□□ -0.38
CSNK1D-201ENST00000269361 TBC1D24Q9ULP9 559 aa12.67□□□□□ -0.38
CSNK1D-201ENST00000269361 APLNQ9ULZ1 77 aa12.67□□□□□ -0.38
CSNK1D-201ENST00000269361 SUPT4H1P63272 117 aaKnown RBP12.66□□□□□ -0.38
CSNK1D-201ENST00000269361 KLF9Q13886 244 aaPredicted RBP12.66□□□□□ -0.38
CSNK1D-201ENST00000269361 SIGLEC15Q6ZMC9 328 aa12.66□□□□□ -0.38
CSNK1D-201ENST00000269361 LGI3Q8N145 548 aa12.66□□□□□ -0.38
CSNK1D-201ENST00000269361 OR51G1Q8NGK1 321 aa12.66□□□□□ -0.38
CSNK1D-201ENST00000269361 DTD1Q8TEA8 209 aa12.66□□□□□ -0.38
CSNK1D-201ENST00000269361 SOSTQ9BQB4 213 aa12.66□□□□□ -0.38
CSNK1D-201ENST00000269361 BCL7BQ9BQE9 202 aa12.66□□□□□ -0.38
CSNK1D-201ENST00000269361 RBKSQ9H477 322 aa12.66□□□□□ -0.38
CSNK1D-201ENST00000269361 ELOA3CA0A087WX78 387 aaPredicted RBP12.65□□□□□ -0.38
CSNK1D-201ENST00000269361 CENPSQ8N2Z9 138 aa12.65□□□□□ -0.38
CSNK1D-201ENST00000269361 FABP12A6NFH5 140 aa12.64□□□□□ -0.39
CSNK1D-201ENST00000269361 H3BMM0 161 aa12.64□□□□□ -0.39
CSNK1D-201ENST00000269361 TNFSF8P32971 234 aa12.64□□□□□ -0.39
CSNK1D-201ENST00000269361 ATP5IP56385 69 aaPredicted RBP12.64□□□□□ -0.39
CSNK1D-201ENST00000269361 NUTF2P61970 127 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-201ENST00000269361 SRPXP78539 464 aa12.64□□□□□ -0.39
CSNK1D-201ENST00000269361 Q6ZTC4 211 aa12.64□□□□□ -0.39
CSNK1D-201ENST00000269361 RNF125Q96EQ8 232 aa12.64□□□□□ -0.39
CSNK1D-201ENST00000269361 SLIRPQ9GZT3 109 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-201ENST00000269361 TRAV10A0A0B4J240 114 aa12.63□□□□□ -0.39
CSNK1D-201ENST00000269361 ANXA3P12429 323 aa12.63□□□□□ -0.39
CSNK1D-201ENST00000269361 GPX4P36969 197 aaPredicted RBP12.63□□□□□ -0.39
CSNK1D-201ENST00000269361 GAMTQ14353 236 aa12.63□□□□□ -0.39
CSNK1D-201ENST00000269361 OR1S1Q8NH92 325 aa12.63□□□□□ -0.39
CSNK1D-201ENST00000269361 PBDC1Q9BVG4 233 aa12.63□□□□□ -0.39
CSNK1D-201ENST00000269361 C1QTNF4Q9BXJ3 329 aa12.63□□□□□ -0.39
CSNK1D-201ENST00000269361 XCL2Q9UBD3 114 aa12.63□□□□□ -0.39
CSNK1D-201ENST00000269361 PFDN2Q9UHV9 154 aa12.63□□□□□ -0.39
CSNK1D-201ENST00000269361 ZFP92A6NM28 416 aa12.62□□□□□ -0.39
CSNK1D-201ENST00000269361 NUP62P37198 522 aaPredicted RBP12.62□□□□□ -0.39
CSNK1D-201ENST00000269361 ZNF90Q03938 601 aa12.62□□□□□ -0.39
CSNK1D-201ENST00000269361 OR8G2PQ6IF36 304 aa12.62□□□□□ -0.39
CSNK1D-201ENST00000269361 IGKV1D-37A0A075B6S9 117 aa12.61□□□□□ -0.39
CSNK1D-201ENST00000269361 PIGBOS1A0A0B4J2F0 54 aa12.61□□□□□ -0.39
CSNK1D-201ENST00000269361 NKX2-1P43699 371 aaPredicted RBP12.61□□□□□ -0.39
CSNK1D-201ENST00000269361 SLC35E1Q96K37 410 aa12.61□□□□□ -0.39
CSNK1D-201ENST00000269361 CELA1Q9UNI1 258 aa12.61□□□□□ -0.39
CSNK1D-201ENST00000269361 IGHV4-4A0A075B6R2 117 aa12.6□□□□□ -0.39
CSNK1D-201ENST00000269361 H3BMQ9 156 aa12.6□□□□□ -0.39
CSNK1D-201ENST00000269361 NOL3O60936 208 aaKnown RBP12.6□□□□□ -0.39
CSNK1D-201ENST00000269361 PITX3O75364 302 aa12.6□□□□□ -0.39
CSNK1D-201ENST00000269361 FABP1P07148 127 aa12.6□□□□□ -0.39
CSNK1D-201ENST00000269361 HLA-DRB4P13762 266 aa12.6□□□□□ -0.39
CSNK1D-201ENST00000269361 C12orf74Q32Q52 190 aa12.6□□□□□ -0.39
CSNK1D-201ENST00000269361 MCFD2Q8NI22 146 aa12.6□□□□□ -0.39
CSNK1D-201ENST00000269361 HLA-DRB4X5D2U9 266 aa12.6□□□□□ -0.39
CSNK1D-201ENST00000269361 DNAH6Q9C0G6 4158 aa12.6□□□□□ -0.39
CSNK1D-201ENST00000269361 SNRPGP15A8MWD9 76 aa12.59□□□□□ -0.39
CSNK1D-201ENST00000269361 FAUP35544 74 aaKnown RBP12.59□□□□□ -0.39
CSNK1D-201ENST00000269361 TMEM128Q5BJH2 165 aa12.59□□□□□ -0.39
CSNK1D-201ENST00000269361 C1orf194Q5T5A4 169 aa12.59□□□□□ -0.39
CSNK1D-201ENST00000269361 ZNF767PQ75MW2 155 aa12.59□□□□□ -0.39
CSNK1D-201ENST00000269361 TMED4Q7Z7H5 227 aa12.59□□□□□ -0.39
CSNK1D-201ENST00000269361 LINC00052Q96N35 136 aa12.59□□□□□ -0.39
CSNK1D-201ENST00000269361 RNF126Q9BV68 326 aa12.59□□□□□ -0.39
CSNK1D-201ENST00000269361 WDR12Q9GZL7 423 aaKnown RBP12.59□□□□□ -0.39
CSNK1D-201ENST00000269361 HECTD4Q9Y4D8 3996 aa12.59□□□□□ -0.39
CSNK1D-201ENST00000269361 AGRNO00468 2067 aa12.58□□□□□ -0.39
CSNK1D-201ENST00000269361 DUXBA0A1W2PPF3 345 aa12.58□□□□□ -0.4
CSNK1D-201ENST00000269361 ID1P41134 155 aa12.58□□□□□ -0.4
CSNK1D-201ENST00000269361 DEFB1P60022 68 aa12.58□□□□□ -0.4
CSNK1D-201ENST00000269361 LYZP61626 148 aa12.58□□□□□ -0.4
CSNK1D-201ENST00000269361 RAB11AP62491 216 aa12.58□□□□□ -0.4
CSNK1D-201ENST00000269361 GDF5OSQ5U4N7 250 aa12.58□□□□□ -0.4
CSNK1D-201ENST00000269361 DEFB131BA0A096LNP1 70 aa12.57□□□□□ -0.4
CSNK1D-201ENST00000269361 IGKV3-20P01619 116 aa12.57□□□□□ -0.4
CSNK1D-201ENST00000269361 IAPPP10997 89 aa12.57□□□□□ -0.4
CSNK1D-201ENST00000269361 PSMB3P49720 205 aa12.57□□□□□ -0.4
CSNK1D-201ENST00000269361 AP3S2P59780 193 aa12.57□□□□□ -0.4
CSNK1D-201ENST00000269361 OR2F1Q13607 317 aa12.57□□□□□ -0.4
CSNK1D-201ENST00000269361 PYDC2Q56P42 97 aa12.57□□□□□ -0.4
CSNK1D-201ENST00000269361 ZNF705AQ6ZN79 300 aaPredicted RBP12.57□□□□□ -0.4
CSNK1D-201ENST00000269361 LRTM2Q8N967 370 aa12.57□□□□□ -0.4
CSNK1D-201ENST00000269361 TRIM63Q969Q1 353 aa12.57□□□□□ -0.4
CSNK1D-201ENST00000269361 NEU1Q99519 415 aa12.57□□□□□ -0.4
CSNK1D-201ENST00000269361 TRGV9Q99603 122 aa12.57□□□□□ -0.4
CSNK1D-201ENST00000269361 SAV1Q9H4B6 383 aaPredicted RBP12.57□□□□□ -0.4
CSNK1D-201ENST00000269361 ZNF705FA8MVS1 300 aaPredicted RBP12.56□□□□□ -0.4
CSNK1D-201ENST00000269361 SOCS3O14543 225 aa12.56□□□□□ -0.4
CSNK1D-201ENST00000269361 ZNF705DP0CH99 300 aaPredicted RBP12.56□□□□□ -0.4
CSNK1D-201ENST00000269361 ZNF705BP0CI00 300 aaPredicted RBP12.56□□□□□ -0.4
CSNK1D-201ENST00000269361 SLC25A6P12236 298 aa12.56□□□□□ -0.4
CSNK1D-201ENST00000269361 VAMP1P23763 118 aa12.56□□□□□ -0.4
CSNK1D-201ENST00000269361 FOXI2Q6ZQN5 318 aa12.56□□□□□ -0.4
CSNK1D-201ENST00000269361 TOMM5Q8N4H5 51 aa12.56□□□□□ -0.4
CSNK1D-201ENST00000269361 COQ8AQ8NI60 647 aa12.56□□□□□ -0.4
CSNK1D-201ENST00000269361 PPP1R14BQ96C90 147 aa12.56□□□□□ -0.4
CSNK1D-201ENST00000269361 CLUHP3Q96NS8 147 aa12.56□□□□□ -0.4
CSNK1D-201ENST00000269361 PAIP2BQ9ULR5 123 aaKnown RBP12.56□□□□□ -0.4
CSNK1D-201ENST00000269361 HERC2O95714 4834 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms