RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 MUC15Q8N387 334 aa7.09□□□□□ -1.27
CCDC7-210ENST00000545067 PRSS3P2Q8NHM4 247 aa7.09□□□□□ -1.27
CCDC7-210ENST00000545067 AP1S3Q96PC3 154 aa7.09□□□□□ -1.27
CCDC7-210ENST00000545067 TLN2Q9Y4G6 2542 aa7.09□□□□□ -1.27
CCDC7-210ENST00000545067 MBD3L4A6NDZ8 208 aaPredicted RBP7.09□□□□□ -1.28
CCDC7-210ENST00000545067 MBD3L3A6NE82 208 aaPredicted RBP7.09□□□□□ -1.28
CCDC7-210ENST00000545067 MBD3L5A6NJ08 208 aaPredicted RBP7.09□□□□□ -1.28
CCDC7-210ENST00000545067 CGB1A6NKQ9 187 aa7.09□□□□□ -1.28
CCDC7-210ENST00000545067 A6NNC1 897 aa7.09□□□□□ -1.28
CCDC7-210ENST00000545067 F2Z2F3 143 aa7.09□□□□□ -1.28
CCDC7-210ENST00000545067 NUPR1O60356 82 aa7.09□□□□□ -1.28
CCDC7-210ENST00000545067 PAFAH1B2P68402 229 aa7.09□□□□□ -1.28
CCDC7-210ENST00000545067 ADIPOQQ15848 244 aa7.09□□□□□ -1.28
CCDC7-210ENST00000545067 PMCHL1Q16048 86 aa7.09□□□□□ -1.28
CCDC7-210ENST00000545067 C22orf34Q6ZV56 151 aa7.09□□□□□ -1.28
CCDC7-210ENST00000545067 SSX8Q7RTT4 187 aa7.09□□□□□ -1.28
CCDC7-210ENST00000545067 MBD3L2Q8NHZ7 208 aaPredicted RBP7.09□□□□□ -1.28
CCDC7-210ENST00000545067 PMCHL2Q9BQD1 86 aa7.09□□□□□ -1.28
CCDC7-210ENST00000545067 TPSG1Q9NRR2 321 aa7.09□□□□□ -1.28
CCDC7-210ENST00000545067 HIGD1AQ9Y241 93 aa7.09□□□□□ -1.28
CCDC7-210ENST00000545067 MYO9AB2RTY4 2548 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 TNRC6AQ8NDV7 1962 aaKnown RBP7.08□□□□□ -1.28
CCDC7-210ENST00000545067 HIGD1CA8MV81 97 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 PEX7O00628 323 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 AREGP15514 252 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 VAMP3Q15836 100 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 LCN12Q6JVE5 192 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 ZNF788Q6ZQV5 615 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 TMEM186Q96B77 213 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 PRO3102Q9H379 93 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 FOXA2Q9Y261 457 aaPredicted RBP7.08□□□□□ -1.28
CCDC7-210ENST00000545067 PIEZO1Q92508 2521 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 IGHV3-49A0A0A0MS15 119 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.08□□□□□ -1.28
CCDC7-210ENST00000545067 PMS2P5A8MQ11 134 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 M0QZ24 198 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 F2RL2O00254 374 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 ISLRO14498 428 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 MC5RP33032 325 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 MAS1LP35410 378 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 OR52E5Q8NH55 327 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 OR5R1Q8NH85 324 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 NDUFAF3Q9BU61 184 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 LOC400499M0QZD8 3231 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 USP9YO00507 2555 aaPredicted RBP7.08□□□□□ -1.28
CCDC7-210ENST00000545067 IGLV1-44P01699 117 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 HLA-DQA1P01909 254 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 CNTFRP26992 372 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 PPOXP50336 477 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 SELENOTP62341 195 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 SEM1Q6ZVN7 128 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.08□□□□□ -1.28
CCDC7-210ENST00000545067 OR8B3Q8NGG8 313 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 SRSF12Q8WXF0 261 aaKnown RBP7.08□□□□□ -1.28
CCDC7-210ENST00000545067 RNASE6Q93091 150 aaKnown RBP7.08□□□□□ -1.28
CCDC7-210ENST00000545067 OR8B2Q96RD0 313 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 CHRDL1Q9BU40 450 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 NRN1Q9NPD7 142 aa7.08□□□□□ -1.28
CCDC7-210ENST00000545067 ZNF785A8K8V0 405 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 EREGO14944 169 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 AMY1AP04745 511 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 SSBP2P81877 361 aaPredicted RBP7.07□□□□□ -1.28
CCDC7-210ENST00000545067 ECSCRQ19T08 205 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 RNF151Q2KHN1 245 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 C1orf229Q6ZS94 237 aaPredicted RBP7.07□□□□□ -1.28
CCDC7-210ENST00000545067 KLHDC1Q8N7A1 406 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 AAMDCQ9H7C9 122 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 TM4SF5O14894 197 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 IL4P05112 153 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 RNASE2P10153 161 aaKnown RBP7.07□□□□□ -1.28
CCDC7-210ENST00000545067 CDKN1AP38936 164 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 FA2HQ7L5A8 372 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 RBM14Q96PK6 669 aaKnown RBP7.07□□□□□ -1.28
CCDC7-210ENST00000545067 MCRIP2Q9BUT9 160 aaKnown RBP7.07□□□□□ -1.28
CCDC7-210ENST00000545067 GGTLC3B5MD39 225 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 SNAI2O43623 268 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 MT-ND6P03923 174 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 FOXL1Q12952 345 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 RAB1CQ92928 201 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 SCNM1Q9BWG6 230 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 TMEM14BQ9NUH8 114 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 CLEC5AQ9NY25 188 aa7.07□□□□□ -1.28
CCDC7-210ENST00000545067 IGHV3OR16-10A0A075B7F0 116 aa7.06□□□□□ -1.28
CCDC7-210ENST00000545067 IGHV3-66A0A0C4DH42 116 aa7.06□□□□□ -1.28
CCDC7-210ENST00000545067 A8MWL6 223 aa7.06□□□□□ -1.28
CCDC7-210ENST00000545067 H0YJW9 148 aa7.06□□□□□ -1.28
CCDC7-210ENST00000545067 TBR1Q16650 682 aa7.06□□□□□ -1.28
CCDC7-210ENST00000545067 SLC25A48Q6ZT89 311 aaKnown RBP7.06□□□□□ -1.28
CCDC7-210ENST00000545067 SCGB2A1O75556 95 aa7.06□□□□□ -1.28
CCDC7-210ENST00000545067 MORN5Q5VZ52 161 aa7.06□□□□□ -1.28
CCDC7-210ENST00000545067 Q6ZS92 163 aa7.06□□□□□ -1.28
CCDC7-210ENST00000545067 ASCL5Q7RTU5 278 aa7.06□□□□□ -1.28
CCDC7-210ENST00000545067 EXOC3-AS1Q8N2X6 119 aa7.06□□□□□ -1.28
CCDC7-210ENST00000545067 CLEC7AQ9BXN2 247 aa7.06□□□□□ -1.28
CCDC7-210ENST00000545067 PARD6GQ9BYG4 376 aaPredicted RBP7.06□□□□□ -1.28
CCDC7-210ENST00000545067 K7EN84 100 aa7.06□□□□□ -1.28
CCDC7-210ENST00000545067 RPLP1P05386 114 aaKnown RBP7.06□□□□□ -1.28
CCDC7-210ENST00000545067 CD99P14209 185 aa7.06□□□□□ -1.28
CCDC7-210ENST00000545067 C21orf62-AS1Q17RA5 79 aa7.06□□□□□ -1.28
CCDC7-210ENST00000545067 STXBP6Q8NFX7 210 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms