RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 TRAV2A0A0B4J234 112 aa9.09□□□□□ -0.95
VEGFA-223ENST00000523125 A0A0B4J2A0 478 aa9.09□□□□□ -0.95
VEGFA-223ENST00000523125 RPS10-NUDT3A0A1W2PQS6 291 aa9.09□□□□□ -0.95
VEGFA-223ENST00000523125 SLC25A4P12235 298 aa9.09□□□□□ -0.95
VEGFA-223ENST00000523125 CCR6P51684 374 aa9.09□□□□□ -0.95
VEGFA-223ENST00000523125 RND2P52198 227 aa9.09□□□□□ -0.95
VEGFA-223ENST00000523125 PAFAH1B2P68402 229 aa9.09□□□□□ -0.95
VEGFA-223ENST00000523125 RBMS2Q15434 407 aaKnown RBP9.09□□□□□ -0.95
VEGFA-223ENST00000523125 METTL26Q96S19 204 aa9.09□□□□□ -0.95
VEGFA-223ENST00000523125 RBM38Q9H0Z9 239 aaKnown RBP9.09□□□□□ -0.95
VEGFA-223ENST00000523125 CSTL1Q9H114 145 aa9.09□□□□□ -0.95
VEGFA-223ENST00000523125 SHPKQ9UHJ6 478 aa9.09□□□□□ -0.95
VEGFA-223ENST00000523125 A0A1W2PS18 150 aa9.08□□□□□ -0.96
VEGFA-223ENST00000523125 K7EQG2 157 aa9.08□□□□□ -0.96
VEGFA-223ENST00000523125 DNASE2O00115 360 aaPredicted RBP9.08□□□□□ -0.96
VEGFA-223ENST00000523125 NPY1RP25929 384 aa9.08□□□□□ -0.96
VEGFA-223ENST00000523125 P2RY1P47900 373 aa9.08□□□□□ -0.96
VEGFA-223ENST00000523125 DEFB131AP59861 70 aa9.08□□□□□ -0.96
VEGFA-223ENST00000523125 YPEL3P61236 119 aaPredicted RBP9.08□□□□□ -0.96
VEGFA-223ENST00000523125 RPL11P62913 178 aaKnown RBP9.08□□□□□ -0.96
VEGFA-223ENST00000523125 SMCO1Q147U7 214 aa9.08□□□□□ -0.96
VEGFA-223ENST00000523125 PYDC2Q56P42 97 aa9.08□□□□□ -0.96
VEGFA-223ENST00000523125 CCDC190Q86UF4 302 aa9.08□□□□□ -0.96
VEGFA-223ENST00000523125 OR1S2Q8NGQ3 325 aa9.08□□□□□ -0.96
VEGFA-223ENST00000523125 RBKSQ9H477 322 aa9.08□□□□□ -0.96
VEGFA-223ENST00000523125 TMEM231Q9H6L2 316 aa9.08□□□□□ -0.96
VEGFA-223ENST00000523125 CACFD1Q9UGQ2 172 aa9.08□□□□□ -0.96
VEGFA-223ENST00000523125 MPTX1A8MV57 137 aa9.07□□□□□ -0.96
VEGFA-223ENST00000523125 PITX3O75364 302 aa9.07□□□□□ -0.96
VEGFA-223ENST00000523125 ATF4P18848 351 aaPredicted RBP9.07□□□□□ -0.96
VEGFA-223ENST00000523125 OR10J1P30954 320 aa9.07□□□□□ -0.96
VEGFA-223ENST00000523125 LEMD1Q68G75 181 aa9.07□□□□□ -0.96
VEGFA-223ENST00000523125 LGI3Q8N145 548 aa9.07□□□□□ -0.96
VEGFA-223ENST00000523125 TOMM5Q8N4H5 51 aa9.07□□□□□ -0.96
VEGFA-223ENST00000523125 DCANP1Q8TF63 244 aa9.07□□□□□ -0.96
VEGFA-223ENST00000523125 NPIPB3Q92617 1050 aa9.07□□□□□ -0.96
VEGFA-223ENST00000523125 U3KQ87 197 aa9.07□□□□□ -0.96
VEGFA-223ENST00000523125 SCGB2A1O75556 95 aa9.06□□□□□ -0.96
VEGFA-223ENST00000523125 JTBO76095 146 aa9.06□□□□□ -0.96
VEGFA-223ENST00000523125 IFNA10P01566 189 aa9.06□□□□□ -0.96
VEGFA-223ENST00000523125 FAUP35544 74 aaKnown RBP9.06□□□□□ -0.96
VEGFA-223ENST00000523125 SRPXP78539 464 aa9.06□□□□□ -0.96
VEGFA-223ENST00000523125 USF2Q15853 346 aaPredicted RBP9.06□□□□□ -0.96
VEGFA-223ENST00000523125 TMEM128Q5BJH2 165 aa9.06□□□□□ -0.96
VEGFA-223ENST00000523125 ETFRF1Q6IPR1 90 aa9.06□□□□□ -0.96
VEGFA-223ENST00000523125 C16orf54Q6UWD8 224 aa9.06□□□□□ -0.96
VEGFA-223ENST00000523125 TMED4Q7Z7H5 227 aa9.06□□□□□ -0.96
VEGFA-223ENST00000523125 STXBP6Q8NFX7 210 aa9.06□□□□□ -0.96
VEGFA-223ENST00000523125 DTD1Q8TEA8 209 aa9.06□□□□□ -0.96
VEGFA-223ENST00000523125 Q8WTZ3 238 aa9.06□□□□□ -0.96
VEGFA-223ENST00000523125 GATAD1Q8WUU5 269 aa9.06□□□□□ -0.96
VEGFA-223ENST00000523125 GLMPQ8WWB7 406 aa9.06□□□□□ -0.96
VEGFA-223ENST00000523125 ACY3Q96HD9 319 aa9.06□□□□□ -0.96
VEGFA-223ENST00000523125 GRAMD2BQ96HH9 432 aa9.06□□□□□ -0.96
VEGFA-223ENST00000523125 RABAC1Q9UI14 185 aa9.06□□□□□ -0.96
VEGFA-223ENST00000523125 EPPK1P58107 5090 aaKnown RBP9.06□□□□□ -0.96
VEGFA-223ENST00000523125 CXorf65A6NEN9 183 aa9.05□□□□□ -0.96
VEGFA-223ENST00000523125 CCDC160A6NGH7 325 aa9.05□□□□□ -0.96
VEGFA-223ENST00000523125 HNRNPCP07910 306 aaKnown RBP eCLIP9.05□□□□□ -0.96
VEGFA-223ENST00000523125 GIG44P09565 113 aaPredicted RBP9.05□□□□□ -0.96
VEGFA-223ENST00000523125 ANXA3P12429 323 aa9.05□□□□□ -0.96
VEGFA-223ENST00000523125 AP3S2P59780 193 aa9.05□□□□□ -0.96
VEGFA-223ENST00000523125 PMS2P11Q13670 270 aa9.05□□□□□ -0.96
VEGFA-223ENST00000523125 NOXA1Q86UR1 476 aa9.05□□□□□ -0.96
VEGFA-223ENST00000523125 LRTM2Q8N967 370 aa9.05□□□□□ -0.96
VEGFA-223ENST00000523125 DUXBA0A1W2PPF3 345 aa9.04□□□□□ -0.96
VEGFA-223ENST00000523125 ZNF701M0R085 212 aaPredicted RBP9.04□□□□□ -0.96
VEGFA-223ENST00000523125 TOMM40O96008 361 aa9.04□□□□□ -0.96
VEGFA-223ENST00000523125 IL4P05112 153 aa9.04□□□□□ -0.96
VEGFA-223ENST00000523125 ZNF688P0C7X2 276 aa9.04□□□□□ -0.96
VEGFA-223ENST00000523125 RD3LP0DJH9 198 aa9.04□□□□□ -0.96
VEGFA-223ENST00000523125 PSG1P11464 419 aa9.04□□□□□ -0.96
VEGFA-223ENST00000523125 S100A5P33763 92 aa9.04□□□□□ -0.96
VEGFA-223ENST00000523125 GAMTQ14353 236 aa9.04□□□□□ -0.96
VEGFA-223ENST00000523125 TRPT1Q86TN4 253 aaKnown RBP9.04□□□□□ -0.96
VEGFA-223ENST00000523125 OR11H2Q8NH07 326 aa9.04□□□□□ -0.96
VEGFA-223ENST00000523125 OR1S1Q8NH92 325 aa9.04□□□□□ -0.96
VEGFA-223ENST00000523125 DEDD2Q8WXF8 326 aa9.04□□□□□ -0.96
VEGFA-223ENST00000523125 NARS2Q96I59 477 aaKnown RBP9.04□□□□□ -0.96
VEGFA-223ENST00000523125 RARRES2Q99969 163 aa9.04□□□□□ -0.96
VEGFA-223ENST00000523125 SLC25A21Q9BQT8 299 aaPredicted RBP9.04□□□□□ -0.96
VEGFA-223ENST00000523125 IGKV1D-37A0A075B6S9 117 aa9.03□□□□□ -0.96
VEGFA-223ENST00000523125 NUPR2A6NF83 97 aa9.03□□□□□ -0.96
VEGFA-223ENST00000523125 BUB3O43684 328 aa9.03□□□□□ -0.96
VEGFA-223ENST00000523125 CA1P00915 261 aaPredicted RBP9.03□□□□□ -0.96
VEGFA-223ENST00000523125 IFNA4P05014 189 aa9.03□□□□□ -0.96
VEGFA-223ENST00000523125 SLC25A6P12236 298 aa9.03□□□□□ -0.96
VEGFA-223ENST00000523125 VAMP1P23763 118 aa9.03□□□□□ -0.96
VEGFA-223ENST00000523125 GPX4P36969 197 aaPredicted RBP9.03□□□□□ -0.96
VEGFA-223ENST00000523125 ATP5IP56385 69 aaPredicted RBP9.03□□□□□ -0.96
VEGFA-223ENST00000523125 PPP1R1AQ13522 171 aa9.03□□□□□ -0.96
VEGFA-223ENST00000523125 CEMP1Q6PRD7 247 aaPredicted RBP9.03□□□□□ -0.96
VEGFA-223ENST00000523125 STHQ8IWL8 128 aa9.03□□□□□ -0.96
VEGFA-223ENST00000523125 SRRQ9GZT4 340 aa9.03□□□□□ -0.96
VEGFA-223ENST00000523125 PIGBOS1A0A0B4J2F0 54 aa9.02□□□□□ -0.97
VEGFA-223ENST00000523125 HELTA6NFD8 242 aa9.02□□□□□ -0.97
VEGFA-223ENST00000523125 KNCNA6PVL3 124 aa9.02□□□□□ -0.97
VEGFA-223ENST00000523125 SFT2D2O95562 160 aa9.02□□□□□ -0.97
VEGFA-223ENST00000523125 ZNF90Q03938 601 aa9.02□□□□□ -0.97
VEGFA-223ENST00000523125 DHRS2Q13268 280 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 227.1 ms