RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 HIST1H2BHQ93079 126 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ARL11Q969Q4 196 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TEX37Q96LM6 180 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PPP3R2Q96LZ3 170 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IGF2BP2-AS1Q96M15 143 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 DERL3Q96Q80 235 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PEBP4Q96S96 227 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MGLLQ99685 303 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 HIST1H2BNQ99877 126 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 HIST1H2BMQ99879 126 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 B9D2Q9BPU9 175 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SLC25A21Q9BQT8 299 aaPredicted RBP0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SPANXDQ9BXN6 97 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LINC00470Q9BZP3 86 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ZNF436Q9C0F3 470 aaPredicted RBP0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 OR2H1Q9GZK4 316 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 YIPF3Q9GZM5 350 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 OR2D2Q9H210 308 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TCEAL2Q9H3H9 227 aaPredicted RBP0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TUBA4BQ9H853 241 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ZNF286AQ9HBT8 521 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 POPDC3Q9HBV1 291 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MRPL16Q9NX20 251 aaKnown RBP0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 COA4Q9NYJ1 87 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MED11Q9P086 117 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 NAT8BQ9UHF3 227 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RPUSD1Q9UJJ7 312 aaKnown RBP0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ERG28Q9UKR5 140 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TRAPPC2LQ9UL33 140 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 HIGD1AQ9Y241 93 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CYSLTR1Q9Y271 337 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 HS3ST2Q9Y278 367 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 COQ4Q9Y3A0 265 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 AMMECR1Q9Y4X0 333 aaPredicted RBP0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RBM7Q9Y580 266 aaKnown RBP0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ZNF706Q9Y5V0 76 aaPredicted RBP0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 R4GN34 69 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 U3KQ87 197 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SIPA1L1O43166 1804 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MYH6P13533 1939 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ANAPC1Q9H1A4 1944 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RAPGEF2Q9Y4G8 1499 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CUL7Q14999 1698 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MAST2Q6P0Q8 1798 aa0.65□□□□□ -2.31
SCARNA16.2-201ENST00000516520 POLEQ07864 2286 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ARHGAP31Q2M1Z3 1444 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MAPKBP1O60336 1514 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TOPBP1Q92547 1522 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 NISCHQ9Y2I1 1504 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 HECW1Q76N89 1606 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ANKRD26Q9UPS8 1709 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 NUP98P52948 1817 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 DSCAMO60469 2012 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IGHV3-21A0A0B4J1V1 117 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IGKV1-6A0A0C4DH72 117 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LOC102725191A0A1B0GVB3 256 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 GRIFINA4D1Z8 144 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TMEM212A6NML5 194 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 FABP5P3A8MUU1 101 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LY6LH3BQJ8 138 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 J3QR89 54 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 K7ERS5 55 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PLA2G10O15496 165 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ZNF73O43830 326 aaPredicted RBP0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IGF2P01344 180 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IFNA17P01571 189 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IGKV1-39P01597 117 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TRGC2P03986 189 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IGKV1D-39P04432 117 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 GPX1P07203 203 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SEC11BP0C7V7 166 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ZNF705DP0CH99 300 aaPredicted RBP0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SMIM17P0DL12 118 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IGHV3-30-3P0DP02 117 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ZNF25P17030 456 aaPredicted RBP0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 NTF3P20783 257 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 FGF7P21781 194 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CRYGSP22914 178 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 NPPCP23582 126 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 KDELR1P24390 212 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 S100A4P26447 101 aaKnown RBP0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 S100A7P31151 101 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 S100A11P31949 105 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RPL27AP46776 148 aaKnown RBP0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 EVX1P49640 407 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RBP2P50120 134 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 DAPP51397 102 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TMBIM6P55061 237 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 NDUFA6P56556 154 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TAS2R30P59541 319 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TAS2R20P59543 309 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 YPEL3P61236 119 aaPredicted RBP0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RPS25P62851 125 aaKnown RBP0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CCL20P78556 96 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 HIST1H1AQ02539 215 aaPredicted RBP0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 AKR1C1Q04828 323 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PDGFRLQ15198 375 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MSMO1Q15800 293 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RRN3P1Q2M238 152 aa0.64□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SP6Q3SY56 376 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms