RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 RPS27LQ71UM5 84 aaKnown RBP5.79□□□□□ -1.48
NIPBL-208ENST00000514335 ZNF534Q76KX8 674 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 BPIFA4PQ86YQ2 179 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 SLC25A45Q8N413 288 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 FGF14Q92915 247 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 PDFQ9HBH1 243 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 TNFRSF19Q9NS68 423 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 NUDT4Q9NZJ9 180 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 SAA2-SAA4A0A096LPE2 208 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 ZNF736B4DX44 427 aaPredicted RBP5.79□□□□□ -1.48
NIPBL-208ENST00000514335 DEDDO75618 318 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 ASAH2BP0C7U1 165 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 SAA4P35542 130 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 TMEM258P61165 79 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 AAED1Q7RTV5 226 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 SLC22A24Q8N4F4 322 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 ANKRD29Q8N6D5 301 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 TMEM105Q8N8V8 129 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 OR2A1Q8NGT9 310 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 SGMS2Q8NHU3 365 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 ZNF563Q8TA94 476 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 KCNS1Q96KK3 526 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 RBM12B-AS1Q9P1G2 102 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 CKLFQ9UBR5 152 aa5.79□□□□□ -1.48
NIPBL-208ENST00000514335 ZNF324O75467 553 aaPredicted RBP5.78□□□□□ -1.48
NIPBL-208ENST00000514335 TCRAP04437 139 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 VMA21Q3ZAQ7 101 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 FAM19A2Q8N3H0 131 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 THAP8Q8NA92 274 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 PPDPFLQ8WWR9 84 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 CYSTM1Q9H1C7 97 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 DOCK7Q96N67 2140 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 ANKRD36A6QL64 1941 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 M0R1B8 84 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 BCL2P10415 239 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 HOXB6P17509 224 aaKnown RBP5.78□□□□□ -1.48
NIPBL-208ENST00000514335 CFPP27918 469 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 CLDN17P56750 224 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 CTXN1P60606 82 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 SP4Q02446 784 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 KRTAP21-3Q3LHN1 58 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 ZAR1Q86SH2 424 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 TRAPPC6BQ86SZ2 158 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 KMT2BQ9UMN6 2715 aaPredicted RBP5.78□□□□□ -1.48
NIPBL-208ENST00000514335 CACNA1GO43497 2377 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 hCG_1818297A0A087WSY0 165 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 A8MT66 165 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 PSPNO60542 156 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 CD7P09564 240 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 CCL1P22362 96 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 SMCPP49901 116 aaPredicted RBP5.78□□□□□ -1.48
NIPBL-208ENST00000514335 PPP1CBP62140 327 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 UBE2G1P62253 170 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 PLGLB1Q02325 96 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 RSPO4Q2I0M5 234 aaPredicted RBP5.78□□□□□ -1.48
NIPBL-208ENST00000514335 C12orf74Q32Q52 190 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 SYT14P1Q58G82 188 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 MRGPREQ86SM8 312 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 ZNF503Q96F45 646 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 ZNF799Q96GE5 643 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 IGF2BP2-AS1Q96M15 143 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 HS3ST6Q96QI5 342 aa5.78□□□□□ -1.48
NIPBL-208ENST00000514335 AMMECR1Q9Y4X0 333 aaPredicted RBP5.78□□□□□ -1.48
NIPBL-208ENST00000514335 MYO9BQ13459 2157 aa5.77□□□□□ -1.48
NIPBL-208ENST00000514335 LYZL6O75951 148 aa5.77□□□□□ -1.49
NIPBL-208ENST00000514335 ZNF883P0CG24 379 aa5.77□□□□□ -1.49
NIPBL-208ENST00000514335 PTGDSP41222 190 aa5.77□□□□□ -1.49
NIPBL-208ENST00000514335 DEFB103AP81534 67 aa5.77□□□□□ -1.49
NIPBL-208ENST00000514335 PRDX1Q06830 199 aaKnown RBP5.77□□□□□ -1.49
NIPBL-208ENST00000514335 MS4A13Q5J8X5 152 aa5.77□□□□□ -1.49
NIPBL-208ENST00000514335 PCSK4Q6UW60 755 aa5.77□□□□□ -1.49
NIPBL-208ENST00000514335 OR51H1Q8NH63 302 aa5.77□□□□□ -1.49
NIPBL-208ENST00000514335 OR2T6Q8NHC8 308 aa5.77□□□□□ -1.49
NIPBL-208ENST00000514335 LINC00479Q96M42 142 aa5.77□□□□□ -1.49
NIPBL-208ENST00000514335 SHROOM3Q8TF72 1996 aa5.77□□□□□ -1.49
NIPBL-208ENST00000514335 K7N7A8 449 aa5.77□□□□□ -1.49
NIPBL-208ENST00000514335 ATP5G1P05496 136 aa5.77□□□□□ -1.49
NIPBL-208ENST00000514335 SMIM13P0DJ93 91 aa5.77□□□□□ -1.49
NIPBL-208ENST00000514335 CRYGAP11844 174 aa5.77□□□□□ -1.49
NIPBL-208ENST00000514335 SPATA3Q8NHX4 192 aa5.77□□□□□ -1.49
NIPBL-208ENST00000514335 ZNF721Q8TF20 911 aa5.77□□□□□ -1.49
NIPBL-208ENST00000514335 NMES1Q9C002 83 aa5.77□□□□□ -1.49
NIPBL-208ENST00000514335 GNB4Q9HAV0 340 aa5.77□□□□□ -1.49
NIPBL-208ENST00000514335 DOCK4Q8N1I0 1966 aa5.76□□□□□ -1.49
NIPBL-208ENST00000514335 ZAR1LA6NP61 321 aa5.76□□□□□ -1.49
NIPBL-208ENST00000514335 ARL6IP5O75915 188 aa5.76□□□□□ -1.49
NIPBL-208ENST00000514335 TRACP01848 142 aa5.76□□□□□ -1.49
NIPBL-208ENST00000514335 APOC2P02655 101 aa5.76□□□□□ -1.49
NIPBL-208ENST00000514335 DYNLT1P63172 113 aa5.76□□□□□ -1.49
NIPBL-208ENST00000514335 EBLN2Q6P2I7 272 aa5.76□□□□□ -1.49
NIPBL-208ENST00000514335 TMEM136Q6ZRR5 245 aa5.76□□□□□ -1.49
NIPBL-208ENST00000514335 CLDND2Q8NHS1 167 aa5.76□□□□□ -1.49
NIPBL-208ENST00000514335 A0A1B0GTH9 108 aa5.76□□□□□ -1.49
NIPBL-208ENST00000514335 ZC3H12DA2A288 527 aaKnown RBP5.76□□□□□ -1.49
NIPBL-208ENST00000514335 FAM220BPB1ANY3 271 aa5.76□□□□□ -1.49
NIPBL-208ENST00000514335 PLXDC1Q8IUK5 500 aa5.76□□□□□ -1.49
NIPBL-208ENST00000514335 SSMEM1Q8WWF3 244 aa5.76□□□□□ -1.49
NIPBL-208ENST00000514335 MRPL20Q9BYC9 149 aaKnown RBP5.76□□□□□ -1.49
NIPBL-208ENST00000514335 AGPAT4-IT1Q9H0P7 198 aa5.76□□□□□ -1.49
NIPBL-208ENST00000514335 MYO7AQ13402 2215 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 222.3 ms