RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 LINC00305Q7Z4B0 112 aa15.38■□□□□ 0.05
SNX17-202ENST00000427123 SRSF12Q8WXF0 261 aaKnown RBP15.38■□□□□ 0.05
SNX17-202ENST00000427123 FXYD5Q96DB9 178 aa15.38■□□□□ 0.05
SNX17-202ENST00000427123 SRSF8Q9BRL6 282 aaKnown RBP15.38■□□□□ 0.05
SNX17-202ENST00000427123 LINC00587B1AMM8 73 aa15.38■□□□□ 0.05
SNX17-202ENST00000427123 M0R1W7 72 aa15.38■□□□□ 0.05
SNX17-202ENST00000427123 GCGP01275 180 aa15.38■□□□□ 0.05
SNX17-202ENST00000427123 AMBPP02760 352 aa15.38■□□□□ 0.05
SNX17-202ENST00000427123 APELAP0DMC3 54 aa15.38■□□□□ 0.05
SNX17-202ENST00000427123 HTR1DP28221 377 aa15.38■□□□□ 0.05
SNX17-202ENST00000427123 C19orf35Q6ZS72 473 aa15.38■□□□□ 0.05
SNX17-202ENST00000427123 STXBP6Q8NFX7 210 aa15.38■□□□□ 0.05
SNX17-202ENST00000427123 OSTCQ9NRP0 149 aa15.38■□□□□ 0.05
SNX17-202ENST00000427123 TIMM23O14925 209 aa15.37■□□□□ 0.05
SNX17-202ENST00000427123 LGALS4P56470 323 aa15.37■□□□□ 0.05
SNX17-202ENST00000427123 TAS2R60P59551 318 aa15.37■□□□□ 0.05
SNX17-202ENST00000427123 RUSC1-AS1Q66K80 236 aa15.37■□□□□ 0.05
SNX17-202ENST00000427123 SSBP3Q9BWW4 388 aaPredicted RBP15.37■□□□□ 0.05
SNX17-202ENST00000427123 CDC42EP3Q9UKI2 254 aa15.37■□□□□ 0.05
SNX17-202ENST00000427123 PLGLAQ15195 96 aa15.36■□□□□ 0.05
SNX17-202ENST00000427123 ZNF329Q86UD4 541 aa15.36■□□□□ 0.05
SNX17-202ENST00000427123 OR1B1Q8NGR6 318 aa15.36■□□□□ 0.05
SNX17-202ENST00000427123 DPM3Q9P2X0 92 aa15.36■□□□□ 0.05
SNX17-202ENST00000427123 LOC105371242A0A075B767 164 aa15.36■□□□□ 0.05
SNX17-202ENST00000427123 PLXNB1O43157 2135 aa15.36■□□□□ 0.05
SNX17-202ENST00000427123 CEACAM3P40198 252 aa15.36■□□□□ 0.05
SNX17-202ENST00000427123 ARF6P62330 175 aa15.36■□□□□ 0.05
SNX17-202ENST00000427123 LDLRAD2Q5SZI1 272 aa15.36■□□□□ 0.05
SNX17-202ENST00000427123 IGF2RP11717 2491 aa15.35■□□□□ 0.05
SNX17-202ENST00000427123 ISLRO14498 428 aa15.35■□□□□ 0.05
SNX17-202ENST00000427123 IGLV2-8P01709 118 aa15.35■□□□□ 0.05
SNX17-202ENST00000427123 ORM2P19652 201 aa15.35■□□□□ 0.05
SNX17-202ENST00000427123 CDPF1Q6NVV7 123 aa15.35■□□□□ 0.05
SNX17-202ENST00000427123 DTX2Q86UW9 622 aa15.35■□□□□ 0.05
SNX17-202ENST00000427123 HYPMO75409 117 aa15.34■□□□□ 0.05
SNX17-202ENST00000427123 HIST1H1BP16401 226 aaKnown RBP15.34■□□□□ 0.05
SNX17-202ENST00000427123 PLP1P60201 277 aa15.34■□□□□ 0.05
SNX17-202ENST00000427123 ODF3BA8MYP8 253 aa15.34■□□□□ 0.05
SNX17-202ENST00000427123 FCN1O00602 326 aa15.34■□□□□ 0.05
SNX17-202ENST00000427123 PEX7O00628 323 aa15.34■□□□□ 0.05
SNX17-202ENST00000427123 MMDQ15546 238 aa15.34■□□□□ 0.05
SNX17-202ENST00000427123 RNASE7Q9H1E1 156 aaKnown RBP15.34■□□□□ 0.05
SNX17-202ENST00000427123 SPTA1P02549 2419 aa15.33■□□□□ 0.05
SNX17-202ENST00000427123 IGHV3-21A0A0B4J1V1 117 aa15.33■□□□□ 0.04
SNX17-202ENST00000427123 PRTN3P24158 256 aa15.33■□□□□ 0.04
SNX17-202ENST00000427123 ADMP35318 185 aa15.33■□□□□ 0.04
SNX17-202ENST00000427123 RPL19P84098 196 aaKnown RBP15.33■□□□□ 0.04
SNX17-202ENST00000427123 OR1L6Q8NGR2 347 aa15.33■□□□□ 0.04
SNX17-202ENST00000427123 CFHR4Q92496 578 aa15.33■□□□□ 0.04
SNX17-202ENST00000427123 TRBV9A0A0B4J1U6 114 aa15.33■□□□□ 0.04
SNX17-202ENST00000427123 NBR2O15453 112 aa15.33■□□□□ 0.04
SNX17-202ENST00000427123 MGST1P10620 155 aaKnown RBP15.33■□□□□ 0.04
SNX17-202ENST00000427123 MYCNOSP40205 109 aa15.33■□□□□ 0.04
SNX17-202ENST00000427123 OR5R1Q8NH85 324 aa15.33■□□□□ 0.04
SNX17-202ENST00000427123 TMEM18Q96B42 140 aa15.33■□□□□ 0.04
SNX17-202ENST00000427123 I3L2K1 104 aa15.32■□□□□ 0.04
SNX17-202ENST00000427123 CNIH1O95406 144 aa15.32■□□□□ 0.04
SNX17-202ENST00000427123 SFTPCP11686 197 aa15.32■□□□□ 0.04
SNX17-202ENST00000427123 CBLN1P23435 193 aa15.32■□□□□ 0.04
SNX17-202ENST00000427123 IBA57Q5T440 356 aaKnown RBP15.32■□□□□ 0.04
SNX17-202ENST00000427123 OR8I2Q8N0Y5 310 aa15.32■□□□□ 0.04
SNX17-202ENST00000427123 KLRD1Q13241 179 aa15.31■□□□□ 0.04
SNX17-202ENST00000427123 JOSD1Q15040 202 aaPredicted RBP15.31■□□□□ 0.04
SNX17-202ENST00000427123 GBGT1Q8N5D6 347 aa15.31■□□□□ 0.04
SNX17-202ENST00000427123 NPBQ8NG41 125 aa15.31■□□□□ 0.04
SNX17-202ENST00000427123 HILPDAQ9Y5L2 63 aa15.31■□□□□ 0.04
SNX17-202ENST00000427123 NDUFA3O95167 84 aa15.31■□□□□ 0.04
SNX17-202ENST00000427123 IGLC1P0CG04 106 aa15.31■□□□□ 0.04
SNX17-202ENST00000427123 FXYD3Q14802 87 aa15.31■□□□□ 0.04
SNX17-202ENST00000427123 KIR3DL3Q8N743 410 aa15.31■□□□□ 0.04
SNX17-202ENST00000427123 MRPL18Q9H0U6 180 aaKnown RBP15.31■□□□□ 0.04
SNX17-202ENST00000427123 PRDM13Q9H4Q3 707 aa15.31■□□□□ 0.04
SNX17-202ENST00000427123 GP9P14770 177 aa15.3■□□□□ 0.04
SNX17-202ENST00000427123 GPR6P46095 362 aaPredicted RBP15.3■□□□□ 0.04
SNX17-202ENST00000427123 CX3CL1P78423 397 aa15.3■□□□□ 0.04
SNX17-202ENST00000427123 WNT10AQ9GZT5 417 aa15.3■□□□□ 0.04
SNX17-202ENST00000427123 HIGD1AQ9Y241 93 aa15.3■□□□□ 0.04
SNX17-202ENST00000427123 C1orf122Q6ZSJ8 110 aa15.29■□□□□ 0.04
SNX17-202ENST00000427123 LINC00479Q96M42 142 aa15.29■□□□□ 0.04
SNX17-202ENST00000427123 GNB1LQ9BYB4 327 aa15.29■□□□□ 0.04
SNX17-202ENST00000427123 IER3P46695 156 aa15.29■□□□□ 0.04
SNX17-202ENST00000427123 RANP62826 216 aaKnown RBP15.29■□□□□ 0.04
SNX17-202ENST00000427123 LY6DQ14210 128 aa15.29■□□□□ 0.04
SNX17-202ENST00000427123 COX19Q49B96 90 aa15.29■□□□□ 0.04
SNX17-202ENST00000427123 WDR73Q6P4I2 378 aa15.29■□□□□ 0.04
SNX17-202ENST00000427123 LHFPL4Q7Z7J7 247 aa15.29■□□□□ 0.04
SNX17-202ENST00000427123 BLNKQ8WV28 456 aa15.29■□□□□ 0.04
SNX17-202ENST00000427123 GSX1Q9H4S2 264 aaPredicted RBP15.29■□□□□ 0.04
SNX17-202ENST00000427123 SMIM27A0A1W2PRY6 76 aa15.28■□□□□ 0.04
SNX17-202ENST00000427123 SLC25A5P05141 298 aaKnown RBP15.28■□□□□ 0.04
SNX17-202ENST00000427123 NBEAP1P0C6P0 100 aa15.28■□□□□ 0.04
SNX17-202ENST00000427123 TMEM183BQ1AE95 376 aa15.28■□□□□ 0.04
SNX17-202ENST00000427123 FAM231DQ6ZW35 169 aa15.28■□□□□ 0.04
SNX17-202ENST00000427123 BAGE2Q86Y30 109 aa15.28■□□□□ 0.04
SNX17-202ENST00000427123 NHLRC2Q8NBF2 726 aa15.28■□□□□ 0.04
SNX17-202ENST00000427123 RASL11BQ9BPW5 248 aa15.28■□□□□ 0.04
SNX17-202ENST00000427123 PRORYQ9H606 182 aa15.28■□□□□ 0.04
SNX17-202ENST00000427123 EPDR1Q9UM22 224 aa15.28■□□□□ 0.04
SNX17-202ENST00000427123 ABCA4P78363 2273 aa15.28■□□□□ 0.04
SNX17-202ENST00000427123 SNURFLB1AK76 121 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 338.8 ms