RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 TMEM230Q96A57 120 aa9.16□□□□□ -0.94
VEGFA-223ENST00000523125 PRRT1Q99946 306 aa9.16□□□□□ -0.94
VEGFA-223ENST00000523125 PDCD10Q9BUL8 212 aa9.16□□□□□ -0.94
VEGFA-223ENST00000523125 C6orf62Q9GZU0 229 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-223ENST00000523125 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-223ENST00000523125 HYDINQ4G0P3 5121 aa9.15□□□□□ -0.94
VEGFA-223ENST00000523125 DNAH1Q9P2D7 4330 aa9.15□□□□□ -0.94
VEGFA-223ENST00000523125 CORTO00230 105 aa9.15□□□□□ -0.94
VEGFA-223ENST00000523125 SUB1P53999 127 aaKnown RBP eCLIP9.15□□□□□ -0.94
VEGFA-223ENST00000523125 DHODHQ02127 395 aa9.15□□□□□ -0.94
VEGFA-223ENST00000523125 ZNF124Q15973 351 aa9.15□□□□□ -0.94
VEGFA-223ENST00000523125 ZNF600Q6ZNG1 722 aa9.15□□□□□ -0.94
VEGFA-223ENST00000523125 Q6ZWC4 215 aa9.15□□□□□ -0.94
VEGFA-223ENST00000523125 WFDC3Q8IUB2 231 aa9.15□□□□□ -0.94
VEGFA-223ENST00000523125 OR52E5Q8NH55 327 aa9.15□□□□□ -0.94
VEGFA-223ENST00000523125 RNASE11Q8TAA1 199 aaKnown RBP9.15□□□□□ -0.94
VEGFA-223ENST00000523125 IL17DQ8TAD2 202 aa9.15□□□□□ -0.94
VEGFA-223ENST00000523125 ST8SIA2Q92186 375 aa9.15□□□□□ -0.94
VEGFA-223ENST00000523125 GPR146Q96CH1 333 aa9.15□□□□□ -0.94
VEGFA-223ENST00000523125 VSIRQ9H7M9 311 aa9.15□□□□□ -0.94
VEGFA-223ENST00000523125 CACNG5Q9UF02 275 aa9.15□□□□□ -0.94
VEGFA-223ENST00000523125 RSL24D1Q9UHA3 163 aaKnown RBP9.15□□□□□ -0.94
VEGFA-223ENST00000523125 PUS1Q9Y606 427 aaKnown RBP eCLIP9.15□□□□□ -0.94
VEGFA-223ENST00000523125 TMEM56-RWDD3S4R434 201 aa9.15□□□□□ -0.94
VEGFA-223ENST00000523125 AGRNO00468 2067 aa9.15□□□□□ -0.94
VEGFA-223ENST00000523125 FABP12A6NFH5 140 aa9.14□□□□□ -0.95
VEGFA-223ENST00000523125 APOC4P55056 127 aa9.14□□□□□ -0.95
VEGFA-223ENST00000523125 TMEM187Q14656 261 aa9.14□□□□□ -0.95
VEGFA-223ENST00000523125 TMEM268Q5VZI3 342 aa9.14□□□□□ -0.95
VEGFA-223ENST00000523125 APRG1Q8IVJ8 170 aa9.14□□□□□ -0.95
VEGFA-223ENST00000523125 OR4X1Q8NH49 305 aa9.14□□□□□ -0.95
VEGFA-223ENST00000523125 TMEM170AQ8WVE7 144 aa9.14□□□□□ -0.95
VEGFA-223ENST00000523125 GALNT14Q96FL9 552 aa9.14□□□□□ -0.95
VEGFA-223ENST00000523125 GINS3Q9BRX5 216 aa9.14□□□□□ -0.95
VEGFA-223ENST00000523125 ENY2Q9NPA8 101 aa9.14□□□□□ -0.95
VEGFA-223ENST00000523125 PRR13Q9NZ81 148 aa9.14□□□□□ -0.95
VEGFA-223ENST00000523125 TP53TG1Q9Y2A0 90 aa9.14□□□□□ -0.95
VEGFA-223ENST00000523125 IGKV3-7A0A075B6H7 116 aa9.13□□□□□ -0.95
VEGFA-223ENST00000523125 KIR2DL5BA0A0G2JN68 375 aa9.13□□□□□ -0.95
VEGFA-223ENST00000523125 KIR2DL5BA0A0G2JPC4 375 aa9.13□□□□□ -0.95
VEGFA-223ENST00000523125 UBE2CO00762 179 aa9.13□□□□□ -0.95
VEGFA-223ENST00000523125 SPRY2O43597 315 aa9.13□□□□□ -0.95
VEGFA-223ENST00000523125 CLN5O75503 358 aa9.13□□□□□ -0.95
VEGFA-223ENST00000523125 IGKV1-17P01599 117 aa9.13□□□□□ -0.95
VEGFA-223ENST00000523125 RPL35AP18077 110 aaKnown RBP9.13□□□□□ -0.95
VEGFA-223ENST00000523125 OPRK1P41145 380 aa9.13□□□□□ -0.95
VEGFA-223ENST00000523125 HTR2BP41595 481 aa9.13□□□□□ -0.95
VEGFA-223ENST00000523125 TFPI2P48307 235 aa9.13□□□□□ -0.95
VEGFA-223ENST00000523125 SUPT4H1P63272 117 aaKnown RBP9.13□□□□□ -0.95
VEGFA-223ENST00000523125 EWSR1Q01844 656 aaKnown RBP eCLIP9.13□□□□□ -0.953e-7■■■□□ 16.8
VEGFA-223ENST00000523125 DEFB135Q30KP9 77 aa9.13□□□□□ -0.95
VEGFA-223ENST00000523125 TCF24Q7RTU0 167 aa9.13□□□□□ -0.95
VEGFA-223ENST00000523125 KIR2DL5AQ8N109 375 aa9.13□□□□□ -0.95
VEGFA-223ENST00000523125 GBGT1Q8N5D6 347 aa9.13□□□□□ -0.95
VEGFA-223ENST00000523125 KIR2DL5BQ8NHK3 375 aa9.13□□□□□ -0.95
VEGFA-223ENST00000523125 MCFD2Q8NI22 146 aa9.13□□□□□ -0.95
VEGFA-223ENST00000523125 MAP6D1Q9H9H5 199 aa9.13□□□□□ -0.95
VEGFA-223ENST00000523125 IGHV3-66A0A0C4DH42 116 aa9.12□□□□□ -0.95
VEGFA-223ENST00000523125 DFFBO76075 338 aa9.12□□□□□ -0.95
VEGFA-223ENST00000523125 C2orf83Q53S99 150 aa9.12□□□□□ -0.95
VEGFA-223ENST00000523125 NMSQ5H8A3 153 aa9.12□□□□□ -0.95
VEGFA-223ENST00000523125 STPG3Q8N7X2 389 aa9.12□□□□□ -0.95
VEGFA-223ENST00000523125 IL22RA2Q969J5 263 aa9.12□□□□□ -0.95
VEGFA-223ENST00000523125 TRIM63Q969Q1 353 aa9.12□□□□□ -0.95
VEGFA-223ENST00000523125 RNF183Q96D59 192 aa9.12□□□□□ -0.95
VEGFA-223ENST00000523125 HEYLQ9NQ87 328 aaPredicted RBP9.12□□□□□ -0.95
VEGFA-223ENST00000523125 SCP2D1Q9UJQ7 156 aa9.12□□□□□ -0.95
VEGFA-223ENST00000523125 KCNIP3Q9Y2W7 256 aa9.12□□□□□ -0.95
VEGFA-223ENST00000523125 PLECQ15149 4684 aaKnown RBP9.11□□□□□ -0.95
VEGFA-223ENST00000523125 A0A0J9YWU9 116 aa9.11□□□□□ -0.95
VEGFA-223ENST00000523125 NOL3O60936 208 aaKnown RBP9.11□□□□□ -0.95
VEGFA-223ENST00000523125 NXPH3O95157 252 aa9.11□□□□□ -0.95
VEGFA-223ENST00000523125 CD5P06127 495 aa9.11□□□□□ -0.95
VEGFA-223ENST00000523125 NPPCP23582 126 aa9.11□□□□□ -0.95
VEGFA-223ENST00000523125 CRYBB3P26998 211 aa9.11□□□□□ -0.95
VEGFA-223ENST00000523125 BMI1P35226 326 aa9.11□□□□□ -0.95
VEGFA-223ENST00000523125 CMC4P56277 68 aaPredicted RBP9.11□□□□□ -0.95
VEGFA-223ENST00000523125 TNFRSF9Q07011 255 aa9.11□□□□□ -0.95
VEGFA-223ENST00000523125 KLF9Q13886 244 aaPredicted RBP9.11□□□□□ -0.95
VEGFA-223ENST00000523125 TIGITQ495A1 244 aa9.11□□□□□ -0.95
VEGFA-223ENST00000523125 PRSS54Q6PEW0 395 aa9.11□□□□□ -0.95
VEGFA-223ENST00000523125 LYZL2Q7Z4W2 148 aa9.11□□□□□ -0.95
VEGFA-223ENST00000523125 LYG2Q86SG7 212 aa9.11□□□□□ -0.95
VEGFA-223ENST00000523125 MS4A6AQ9H2W1 248 aa9.11□□□□□ -0.95
VEGFA-223ENST00000523125 MCUBQ9NWR8 336 aa9.11□□□□□ -0.95
VEGFA-223ENST00000523125 V9GYH0 126 aa9.11□□□□□ -0.95
VEGFA-223ENST00000523125 CEBPZOSA8MTT3 80 aa9.1□□□□□ -0.95
VEGFA-223ENST00000523125 IGLC1P0CG04 106 aa9.1□□□□□ -0.95
VEGFA-223ENST00000523125 SULT1A3P0DMM9 295 aa9.1□□□□□ -0.95
VEGFA-223ENST00000523125 SULT1A4P0DMN0 295 aa9.1□□□□□ -0.95
VEGFA-223ENST00000523125 AKR1C4P17516 323 aa9.1□□□□□ -0.95
VEGFA-223ENST00000523125 ZNF79Q15937 498 aa9.1□□□□□ -0.95
VEGFA-223ENST00000523125 FAM24BQ8N5W8 94 aa9.1□□□□□ -0.95
VEGFA-223ENST00000523125 SLC24A4Q8NFF2 622 aa9.1□□□□□ -0.95
VEGFA-223ENST00000523125 RNASEH2CQ8TDP1 164 aaKnown RBP9.1□□□□□ -0.95
VEGFA-223ENST00000523125 SCGB3A2Q96PL1 93 aa9.1□□□□□ -0.95
VEGFA-223ENST00000523125 HSPB7Q9UBY9 170 aa9.1□□□□□ -0.95
VEGFA-223ENST00000523125 U3KQE9 123 aa9.1□□□□□ -0.95
VEGFA-223ENST00000523125 ALMS1Q8TCU4 4167 aa9.09□□□□□ -0.95
VEGFA-223ENST00000523125 TRAV30A0A087WSZ9 112 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms