RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 VSIRQ9H7M9 311 aa3.11□□□□□ -1.91
NIPBL-207ENST00000513819 EDA2RQ9HAV5 297 aa3.11□□□□□ -1.91
NIPBL-207ENST00000513819 CYTL1Q9NRR1 136 aa3.11□□□□□ -1.91
NIPBL-207ENST00000513819 AK3Q9UIJ7 227 aa3.11□□□□□ -1.91
NIPBL-207ENST00000513819 PKIGQ9Y2B9 76 aa3.11□□□□□ -1.91
NIPBL-207ENST00000513819 COQ4Q9Y3A0 265 aa3.11□□□□□ -1.91
NIPBL-207ENST00000513819 MAP3K4Q9Y6R4 1608 aa3.11□□□□□ -1.91
NIPBL-207ENST00000513819 MYH10P35580 1976 aa3.11□□□□□ -1.91
NIPBL-207ENST00000513819 PXDNLA1KZ92 1463 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 IGKV1D-8A0A087WSZ0 117 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 TRBV6-7A0A0A0MS04 114 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 TMED7-TICAM2A0A0A6YYA0 188 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 FAM236DA0A1B0GTK5 79 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 DAPL1A0PJW8 107 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 ZNF727A8MUV8 499 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 EEF1E1O43324 174 aaKnown RBP3.1□□□□□ -1.91
NIPBL-207ENST00000513819 PGLYRP1O75594 196 aaPredicted RBP3.1□□□□□ -1.91
NIPBL-207ENST00000513819 NDUFB6O95139 128 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 C1orf105O95561 183 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 FAM236CP0DP71 79 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 ELK1P19419 428 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 PPIBP23284 216 aaKnown RBP3.1□□□□□ -1.91
NIPBL-207ENST00000513819 RBMXP38159 391 aaKnown RBP3.1□□□□□ -1.91
NIPBL-207ENST00000513819 CA7P43166 264 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 VDAC2P45880 294 aaPredicted RBP3.1□□□□□ -1.91
NIPBL-207ENST00000513819 MARCKSL1P49006 195 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 RBM11P57052 281 aaKnown RBP3.1□□□□□ -1.91
NIPBL-207ENST00000513819 HLA-DRB3P79483 266 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 ATP5G2Q06055 141 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 SLC38A11Q08AI6 406 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 ZNF141Q15928 474 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 PMCHL1Q16048 86 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 SLC25A35Q3KQZ1 300 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 LCN15Q6UWW0 184 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 SHISA6Q6ZSJ9 500 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 PRR22Q8IZ63 422 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 NPWQ8N729 165 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 WDR31Q8NA23 367 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 PIFOQ8TCI5 191 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 RTN4IP1Q8WWV3 396 aaPredicted RBP3.1□□□□□ -1.91
NIPBL-207ENST00000513819 ARPC1AQ92747 370 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 MAL2Q969L2 176 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 TVP23CQ96ET8 276 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 TBL1YQ9BQ87 522 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 AGMATQ9BSE5 352 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 GABARAPL3Q9BY60 117 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 FBXL15Q9H469 300 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 FGF20Q9NP95 211 aaPredicted RBP3.1□□□□□ -1.91
NIPBL-207ENST00000513819 OR5V1Q9UGF6 321 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 TRMT112Q9UI30 125 aaKnown RBP3.1□□□□□ -1.91
NIPBL-207ENST00000513819 HEBP2Q9Y5Z4 205 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 ARAP2Q8WZ64 1704 aa3.1□□□□□ -1.91
NIPBL-207ENST00000513819 GLI3P10071 1580 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 MUC21A0A0G2JKD1 596 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 MUC21A0A140T8X8 626 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 TRDV1A0A1B0GX56 115 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 TCRBV9S1A1TA0A576 114 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 TSPAN11A1L157 253 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 OR4C45A6NMZ5 311 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 GGTLC3B5MD39 225 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 TMEM262E9PQX1 116 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 LY6LH3BQJ8 138 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 IGHMP01871 453 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 IL3P08700 152 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 ZNF708P17019 499 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 OPRM1P35372 400 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 NMUP48645 174 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 IGFBP7Q16270 282 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 CLEC12BQ2HXU8 276 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 MPV17L2Q567V2 206 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 HBMQ6B0K9 141 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 ZNF880Q6PDB4 577 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 ZNF695Q8IW36 515 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 C11orf53Q8IXP5 236 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 ZNF101Q8IZC7 436 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 ATOH7Q8N100 152 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 EXOC3-AS1Q8N2X6 119 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 C10orf111Q8N326 155 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 OR11H6Q8NGC7 330 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 OR10AG1Q8NH19 301 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 OR52P1PQ8NH57 321 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 CMTM2Q8TAZ6 248 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 ZNF502Q8TBZ5 544 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 SMIM4Q8WVI0 70 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 BORCS7Q96B45 105 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 NEURL3Q96EH8 262 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 ADAT3Q96EY9 351 aaPredicted RBP3.09□□□□□ -1.91
NIPBL-207ENST00000513819 DYNLL2Q96FJ2 89 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 AP1S3Q96PC3 154 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 SPANXDQ9BXN6 97 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 NOP16Q9Y3C1 178 aaKnown RBP3.09□□□□□ -1.91
NIPBL-207ENST00000513819 SPCS1Q9Y6A9 102 aa3.09□□□□□ -1.91
NIPBL-207ENST00000513819 KIF13BQ9NQT8 1826 aa3.09□□□□□ -1.92
NIPBL-207ENST00000513819 PTPRMP28827 1452 aa3.09□□□□□ -1.92
NIPBL-207ENST00000513819 MED1Q15648 1581 aaPredicted RBP3.08□□□□□ -1.92
NIPBL-207ENST00000513819 RGPD8O14715 1765 aaPredicted RBP3.08□□□□□ -1.92
NIPBL-207ENST00000513819 RBBP6Q7Z6E9 1792 aaKnown RBP3.08□□□□□ -1.92
NIPBL-207ENST00000513819 RGPD5Q99666 1765 aa3.08□□□□□ -1.92
NIPBL-207ENST00000513819 NUP210LQ5VU65 1888 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms