RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 MXD1Q05195 221 aa16.91■□□□□ 0.3
NUP50-211ENST00000445721 DHRS2Q13268 280 aa16.91■□□□□ 0.3
NUP50-211ENST00000445721 PHLDA2Q53GA4 152 aa16.91■□□□□ 0.3
NUP50-211ENST00000445721 NARS2Q96I59 477 aaKnown RBP16.91■□□□□ 0.3
NUP50-211ENST00000445721 SEC22AQ96IW7 307 aa16.91■□□□□ 0.3
NUP50-211ENST00000445721 C1QTNF4Q9BXJ3 329 aa16.91■□□□□ 0.3
NUP50-211ENST00000445721 CDK2AP2O75956 126 aa16.9■□□□□ 0.3
NUP50-211ENST00000445721 CLEC2LP0C7M8 214 aa16.9■□□□□ 0.3
NUP50-211ENST00000445721 SDC2P34741 201 aa16.9■□□□□ 0.3
NUP50-211ENST00000445721 SCAND1P57086 179 aa16.9■□□□□ 0.3
NUP50-211ENST00000445721 NUTF2P61970 127 aaKnown RBP16.9■□□□□ 0.3
NUP50-211ENST00000445721 IDNKQ5T6J7 187 aa16.9■□□□□ 0.3
NUP50-211ENST00000445721 NRG4Q8WWG1 115 aa16.9■□□□□ 0.3
NUP50-211ENST00000445721 FAM210BQ96KR6 192 aa16.9■□□□□ 0.3
NUP50-211ENST00000445721 FXYD6Q9H0Q3 95 aa16.9■□□□□ 0.3
NUP50-211ENST00000445721 BLOC1S6Q9UL45 172 aa16.9■□□□□ 0.3
NUP50-211ENST00000445721 HELTA6NFD8 242 aa16.89■□□□□ 0.29
NUP50-211ENST00000445721 SNCAP37840 140 aa16.89■□□□□ 0.29
NUP50-211ENST00000445721 RNF212Q495C1 297 aa16.89■□□□□ 0.29
NUP50-211ENST00000445721 TMEM230Q96A57 120 aa16.89■□□□□ 0.29
NUP50-211ENST00000445721 SSR3Q9UNL2 185 aa16.89■□□□□ 0.29
NUP50-211ENST00000445721 IGKV1-39P01597 117 aa16.88■□□□□ 0.29
NUP50-211ENST00000445721 IGKV1D-39P04432 117 aa16.88■□□□□ 0.29
NUP50-211ENST00000445721 PSMB9P28065 219 aa16.87■□□□□ 0.29
NUP50-211ENST00000445721 EIF2B2P49770 351 aaKnown RBP16.87■□□□□ 0.29
NUP50-211ENST00000445721 KCTD21Q4G0X4 260 aa16.87■□□□□ 0.29
NUP50-211ENST00000445721 OR5H2Q8NGV7 314 aa16.87■□□□□ 0.29
NUP50-211ENST00000445721 OR6F1Q8NGZ6 308 aa16.87■□□□□ 0.29
NUP50-211ENST00000445721 MRGPRFQ96AM1 343 aa16.87■□□□□ 0.29
NUP50-211ENST00000445721 FAM212BQ9NTI7 297 aaPredicted RBP16.87■□□□□ 0.29
NUP50-211ENST00000445721 MRPL36Q9P0J6 103 aaKnown RBP16.87■□□□□ 0.29
NUP50-211ENST00000445721 HTN3P15516 51 aa16.86■□□□□ 0.29
NUP50-211ENST00000445721 S100GP29377 79 aa16.86■□□□□ 0.29
NUP50-211ENST00000445721 IZUMO4Q1ZYL8 232 aa16.86■□□□□ 0.29
NUP50-211ENST00000445721 TBC1D26Q86UD7 250 aa16.86■□□□□ 0.29
NUP50-211ENST00000445721 CNBD2Q96M20 576 aa16.86■□□□□ 0.29
NUP50-211ENST00000445721 LRP1BQ9NZR2 4599 aa16.86■□□□□ 0.29
NUP50-211ENST00000445721 TMEM189A5PLL7 270 aa16.85■□□□□ 0.29
NUP50-211ENST00000445721 CLN5O75503 358 aa16.85■□□□□ 0.29
NUP50-211ENST00000445721 TAS2R46P59540 309 aa16.85■□□□□ 0.29
NUP50-211ENST00000445721 TNP2Q05952 138 aa16.85■□□□□ 0.29
NUP50-211ENST00000445721 MLANAQ16655 118 aa16.85■□□□□ 0.29
NUP50-211ENST00000445721 NEU1Q99519 415 aa16.85■□□□□ 0.29
NUP50-211ENST00000445721 NACAE9PAV3 2078 aa16.85■□□□□ 0.29
NUP50-211ENST00000445721 H3BMM0 161 aa16.84■□□□□ 0.29
NUP50-211ENST00000445721 ZNF705AQ6ZN79 300 aaPredicted RBP16.84■□□□□ 0.29
NUP50-211ENST00000445721 SLC35G3Q8N808 338 aa16.84■□□□□ 0.29
NUP50-211ENST00000445721 U3KQE9 123 aa16.84■□□□□ 0.29
NUP50-211ENST00000445721 IGHV3OR16-12A0A075B7B8 117 aa16.83■□□□□ 0.28
NUP50-211ENST00000445721 SUB1P53999 127 aaKnown RBP eCLIP16.83■□□□□ 0.28
NUP50-211ENST00000445721 SNRPD3P62318 126 aaKnown RBP16.83■□□□□ 0.28
NUP50-211ENST00000445721 HERC1Q15751 4861 aa16.83■□□□□ 0.28
NUP50-211ENST00000445721 TIGITQ495A1 244 aa16.83■□□□□ 0.28
NUP50-211ENST00000445721 OR4X1Q8NH49 305 aa16.83■□□□□ 0.28
NUP50-211ENST00000445721 NIPSNAP3BQ9BS92 247 aa16.83■□□□□ 0.28
NUP50-211ENST00000445721 FNDC4Q9H6D8 234 aaPredicted RBP16.83■□□□□ 0.28
NUP50-211ENST00000445721 RNF167Q9H6Y7 350 aa16.83■□□□□ 0.28
NUP50-211ENST00000445721 ANAPC10Q9UM13 185 aa16.83■□□□□ 0.28
NUP50-211ENST00000445721 ZNF705FA8MVS1 300 aaPredicted RBP16.82■□□□□ 0.28
NUP50-211ENST00000445721 FAM90A26D6RGX4 464 aa16.82■□□□□ 0.28
NUP50-211ENST00000445721 CORTO00230 105 aa16.82■□□□□ 0.28
NUP50-211ENST00000445721 SCGB2A1O75556 95 aa16.82■□□□□ 0.28
NUP50-211ENST00000445721 IGKV1-17P01599 117 aa16.82■□□□□ 0.28
NUP50-211ENST00000445721 ZNF705DP0CH99 300 aaPredicted RBP16.82■□□□□ 0.28
NUP50-211ENST00000445721 ZNF705BP0CI00 300 aaPredicted RBP16.82■□□□□ 0.28
NUP50-211ENST00000445721 RNASE2P10153 161 aaKnown RBP16.82■□□□□ 0.28
NUP50-211ENST00000445721 OPRK1P41145 380 aa16.82■□□□□ 0.28
NUP50-211ENST00000445721 AP2S1P53680 142 aaPredicted RBP16.82■□□□□ 0.28
NUP50-211ENST00000445721 C16orf54Q6UWD8 224 aa16.82■□□□□ 0.28
NUP50-211ENST00000445721 GLMPQ8WWB7 406 aa16.82■□□□□ 0.28
NUP50-211ENST00000445721 DKK2Q9UBU2 259 aa16.82■□□□□ 0.28
NUP50-211ENST00000445721 SMIM9A6NGZ8 99 aa16.81■□□□□ 0.28
NUP50-211ENST00000445721 FAM222AQ5U5X8 452 aa16.81■□□□□ 0.28
NUP50-211ENST00000445721 LPCAT3Q6P1A2 487 aa16.81■□□□□ 0.28
NUP50-211ENST00000445721 Q8N1X5 172 aa16.81■□□□□ 0.28
NUP50-211ENST00000445721 RFNGQ9Y644 331 aa16.81■□□□□ 0.28
NUP50-211ENST00000445721 INS-IGF2F8WCM5 200 aa16.8■□□□□ 0.28
NUP50-211ENST00000445721 NAT1P18440 290 aa16.8■□□□□ 0.28
NUP50-211ENST00000445721 HRH1P35367 487 aa16.8■□□□□ 0.28
NUP50-211ENST00000445721 FXYD7P58549 80 aa16.8■□□□□ 0.28
NUP50-211ENST00000445721 S100A16Q96FQ6 103 aaKnown RBP16.8■□□□□ 0.28
NUP50-211ENST00000445721 TEX48A0A1B0GUV7 120 aa16.79■□□□□ 0.28
NUP50-211ENST00000445721 IGKV3-20P01619 116 aa16.79■□□□□ 0.28
NUP50-211ENST00000445721 HNRNPCP07910 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
NUP50-211ENST00000445721 HLA-DMAP28067 261 aa16.79■□□□□ 0.28
NUP50-211ENST00000445721 ETV6P41212 452 aa16.79■□□□□ 0.28
NUP50-211ENST00000445721 TSPAN5P62079 268 aa16.79■□□□□ 0.28
NUP50-211ENST00000445721 TMEM88Q6PEY1 159 aa16.79■□□□□ 0.28
NUP50-211ENST00000445721 LYSMD2Q8IV50 215 aa16.79■□□□□ 0.28
NUP50-211ENST00000445721 TMED3Q9Y3Q3 217 aa16.79■□□□□ 0.28
NUP50-211ENST00000445721 TRAV30A0A087WSZ9 112 aa16.78■□□□□ 0.28
NUP50-211ENST00000445721 A0A0B4J293 547 aa16.78■□□□□ 0.28
NUP50-211ENST00000445721 HLA-DRB4P13762 266 aa16.78■□□□□ 0.28
NUP50-211ENST00000445721 HOXA1P49639 335 aaPredicted RBP16.78■□□□□ 0.28
NUP50-211ENST00000445721 SPARTQ8N0X7 666 aa16.78■□□□□ 0.28
NUP50-211ENST00000445721 NRN1Q9NPD7 142 aa16.78■□□□□ 0.28
NUP50-211ENST00000445721 SCRT2Q9NQ03 307 aa16.78■□□□□ 0.28
NUP50-211ENST00000445721 HLA-DRB4X5D2U9 266 aa16.78■□□□□ 0.28
NUP50-211ENST00000445721 LOC100506127A0A0U1RQW1 187 aa16.77■□□□□ 0.28
NUP50-211ENST00000445721 IGKV1-5P01602 117 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms